NP-MRD: Showing NP-Card for (1r,2r,4ar,5r,5'r,8as)-5'-(furan-3-yl)-5,8a-dihydroxy-4a,5-bis(hydroxymethyl)-2-methyl-tetrahydro-2h-spiro[naphthalene-1,3'-oxolane]-2',4-dione (NP0308394)

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Record Information

Version

1.0

Created at

2022-09-11 02:08:19 UTC

Updated at

2022-09-11 02:08:19 UTC

NP-MRD ID

NP0308394

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1r,2r,4ar,5r,5'r,8as)-5'-(furan-3-yl)-5,8a-dihydroxy-4a,5-bis(hydroxymethyl)-2-methyl-tetrahydro-2h-spiro[naphthalene-1,3'-oxolane]-2',4-dione

Description

Sandrasin B belongs to the class of organic compounds known as diterpene lactones. These are diterpenoids containing a lactone moiety. (1r,2r,4ar,5r,5'r,8as)-5'-(furan-3-yl)-5,8a-dihydroxy-4a,5-bis(hydroxymethyl)-2-methyl-tetrahydro-2h-spiro[naphthalene-1,3'-oxolane]-2',4-dione is found in Teucrium sandrasicum. It was first documented in 2022 (PMID: 36137741). Based on a literature review a significant number of articles have been published on Sandrasin B (PMID: 36137648) (PMID: 36137641) (PMID: 36137593) (PMID: 36137590).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309112204082D          

 28 31  0  0  1  0            999 V2000
   -1.7743   -1.5880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9868   -1.3421    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.3801   -1.9011    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4074   -1.6551    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0142   -2.2141    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5881   -0.8501    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.1949   -1.4091    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9824   -1.1632    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0186   -0.2911    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4282    0.3927    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2245    0.4152    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9496    0.7598    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5563    0.2008    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3756   -0.6042    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.6489   -1.3826    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1738   -0.8129    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7536   -0.2260    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8061   -0.5371    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.6150   -0.6994    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0193    0.0197    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.8387    0.1153    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3977   -0.4915    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1475   -0.1473    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0519    0.6721    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2431    0.8344    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4603    0.6265    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7105    0.2823    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0086    0.6866    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  1  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  2  0  0  0  0
  4  6  1  0  0  0  0
  6  7  1  1  0  0  0
  7  8  1  0  0  0  0
  6  9  1  0  0  0  0
  9 10  1  1  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
  6 14  1  0  0  0  0
 14 15  1  1  0  0  0
 14 16  1  6  0  0  0
 16 17  1  0  0  0  0
  9 18  1  0  0  0  0
  2 18  1  0  0  0  0
 18 19  1  6  0  0  0
 19 20  1  0  0  0  0
 20 21  1  6  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 21 25  2  0  0  0  0
 20 26  1  0  0  0  0
 26 27  1  0  0  0  0
 18 27  1  0  0  0  0
 27 28  2  0  0  0  0
M  END

     RDKit          3D

 54 57  0  0  0  0  0  0  0  0999 V2000
    0.4389   -3.1198    1.4050 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7822   -1.6785    1.3411 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0640   -0.8393    2.3659 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7387    0.2612    1.8165 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6850    1.3364    2.3318 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5998    0.0332    0.6430 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.7563   -0.7935    1.2762 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3639   -0.0401    2.2719 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8396   -0.8348   -0.3288 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.3758   -2.1433   -0.1768 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9793   -0.4937   -1.7629 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3031    0.0515   -2.1782 C   0  0  0  0  0  0  0  0  0  0  0  0
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    0.6183   -1.0111    0.0143 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4418    0.2251    0.0335 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7838   -0.2921   -0.5087 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.6784    0.7933   -0.8798 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8305    1.1386   -0.2054 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3868    2.2100   -0.8698 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6121    2.4941   -1.8884 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5840    1.6760   -1.9321 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3598   -1.1000   -1.5635 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2348   -1.7767   -1.1135 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8617   -2.8709   -1.6392 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2828   -3.6457    0.4700 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5167   -3.2417    1.9957 H   0  0  0  0  0  0  0  0  0  0  0  0
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    1.8812   -1.6048    1.5989 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6271   -1.5384    2.9017 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7666   -0.4398    3.1537 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3395   -1.7102    1.7383 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4963   -1.1020    0.5557 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2992   -0.4666    3.1576 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7210   -2.5096   -1.0047 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8565   -1.4600   -2.3478 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1185    0.1122   -2.1774 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9726   -0.7471   -2.6186 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -4.0157    0.2121   -0.8538 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8475    2.3813    1.5506 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8530    2.1940   -1.3144 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2796    3.0860   -0.8360 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1436    3.6658   -0.0011 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7006    0.5631    1.0801 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0848    1.0816   -0.5206 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2399   -0.9417    0.2495 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2577    0.6868    0.6792 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3028    2.6989   -0.5682 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8145    1.7035   -2.6650 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  2  0
  4  6  1  0
  6  7  1  1
  7  8  1  0
  6 14  1  0
 14 15  1  1
 14 16  1  0
 16 17  1  0
 14 13  1  0
 13 12  1  0
 12 11  1  0
 11  9  1  0
  9 10  1  6
  9 18  1  0
 18 19  1  0
 19 20  1  0
 20 26  1  0
 26 27  1  0
 27 28  2  0
 20 21  1  0
 21 25  2  0
 25 24  1  0
 24 23  1  0
 23 22  2  0
 18  2  1  0
 18 27  1  6
 22 21  1  0
  9  6  1  0
  1 29  1  0
  1 30  1  0
  1 31  1  0
  2 32  1  1
  3 33  1  0
  3 34  1  0
  7 35  1  0
  7 36  1  0
  8 37  1  0
 15 45  1  0
 16 46  1  0
 16 47  1  0
 17 48  1  0
 13 43  1  0
 13 44  1  0
 12 41  1  0
 12 42  1  0
 11 39  1  0
 11 40  1  0
 10 38  1  0
 19 49  1  0
 19 50  1  0
 20 51  1  1
 25 54  1  0
 23 53  1  0
 22 52  1  0
M  END


  Mrv1652309112204082D          

 28 31  0  0  1  0            999 V2000
   -1.7743   -1.5880    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9868   -1.3421    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.3801   -1.9011    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4074   -1.6551    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0142   -2.2141    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5881   -0.8501    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.1949   -1.4091    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9824   -1.1632    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0186   -0.2911    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.4282    0.3927    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2245    0.4152    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9496    0.7598    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5563    0.2008    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3756   -0.6042    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.6489   -1.3826    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1738   -0.8129    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7536   -0.2260    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8061   -0.5371    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.6150   -0.6994    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0193    0.0197    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.8387    0.1153    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3977   -0.4915    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1475   -0.1473    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0519    0.6721    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2431    0.8344    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4603    0.6265    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7105    0.2823    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0086    0.6866    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  1  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  2  0  0  0  0
  4  6  1  0  0  0  0
  6  7  1  1  0  0  0
  7  8  1  0  0  0  0
  6  9  1  0  0  0  0
  9 10  1  1  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
  6 14  1  0  0  0  0
 14 15  1  1  0  0  0
 14 16  1  6  0  0  0
 16 17  1  0  0  0  0
  9 18  1  0  0  0  0
  2 18  1  0  0  0  0
 18 19  1  6  0  0  0
 19 20  1  0  0  0  0
 20 21  1  6  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 21 25  2  0  0  0  0
 20 26  1  0  0  0  0
 26 27  1  0  0  0  0
 18 27  1  0  0  0  0
 27 28  2  0  0  0  0
M  END
> <DATABASE_ID>
NP0308394

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@@H]1CC(=O)[C@@]2(CO)[C@@](O)(CO)CCC[C@@]2(O)[C@@]11C[C@@H](OC1=O)C1=COC=C1

> <INCHI_IDENTIFIER>
InChI=1S/C20H26O8/c1-12-7-15(23)19(11-22)17(25,10-21)4-2-5-20(19,26)18(12)8-14(28-16(18)24)13-3-6-27-9-13/h3,6,9,12,14,21-22,25-26H,2,4-5,7-8,10-11H2,1H3/t12-,14-,17+,18+,19+,20-/m1/s1

> <INCHI_KEY>
RXDUFGKJOZHMHQ-AYSXHUKSSA-N

> <FORMULA>
C20H26O8

> <MOLECULAR_WEIGHT>
394.42

> <EXACT_MASS>
394.162767797

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
54

> <JCHEM_AVERAGE_POLARIZABILITY>
39.04339186925418

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
4

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,2R,4aR,5R,5'R,8aS)-5'-(furan-3-yl)-5,8a-dihydroxy-4a,5-bis(hydroxymethyl)-2-methyl-octahydro-2H-spiro[naphthalene-1,3'-oxolane]-2',4-dione

> <JCHEM_LOGP>
-0.3190576659999996

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.697185756505718

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.013646961424001

> <JCHEM_PKA_STRONGEST_BASIC>
-2.888609493142984

> <JCHEM_POLAR_SURFACE_AREA>
137.43

> <JCHEM_REFRACTIVITY>
95.2407

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(1R,2R,4aR,5R,5'R,8aS)-5'-(furan-3-yl)-5,8a-dihydroxy-4a,5-bis(hydroxymethyl)-2-methyl-tetrahydro-2H-spiro[naphthalene-1,3'-oxolane]-2',4-dione

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 11-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   11-SEP-22         0                                  
HETATM    1  C   UNK     0      -3.312  -2.964   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -1.842  -2.505   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -0.709  -3.549   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       0.760  -3.090   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0       1.893  -4.133   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0       1.098  -1.587   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       2.230  -2.630   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       3.700  -2.171   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0      -0.035  -0.543   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0      -0.799   0.733   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0       0.419   0.775   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       1.773   1.418   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       2.905   0.375   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.568  -1.128   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0       3.078  -2.581   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0       4.058  -1.517   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       5.140  -0.422   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0      -1.505  -1.003   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -3.015  -1.306   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -3.769   0.037   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      -5.299   0.215   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -6.342  -0.917   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      -7.742  -0.275   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0      -7.564   1.255   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0      -6.054   1.558   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0      -2.726   1.169   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0      -1.326   0.527   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0       0.016   1.282   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3   18                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5    6                                                  
CONECT    5    4                                                            
CONECT    6    4    7    9   14                                             
CONECT    7    6    8                                                       
CONECT    8    7                                                            
CONECT    9    6   10   11   18                                             
CONECT   10    9                                                            
CONECT   11    9   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13    6   15   16                                             
CONECT   15   14                                                            
CONECT   16   14   17                                                       
CONECT   17   16                                                            
CONECT   18    9    2   19   27                                             
CONECT   19   18   20                                                       
CONECT   20   19   21   26                                                  
CONECT   21   20   22   25                                                  
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   21                                                       
CONECT   26   20   27                                                       
CONECT   27   26   18   28                                                  
CONECT   28   27                                                            
MASTER        0    0    0    0    0    0    0    0   28    0   62    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₀H₂₆O₈

Average Mass

394.4200 Da

Monoisotopic Mass

394.16277 Da

IUPAC Name

(1R,2R,4aR,5R,5'R,8aS)-5'-(furan-3-yl)-5,8a-dihydroxy-4a,5-bis(hydroxymethyl)-2-methyl-octahydro-2H-spiro[naphthalene-1,3'-oxolane]-2',4-dione

Traditional Name

(1R,2R,4aR,5R,5'R,8aS)-5'-(furan-3-yl)-5,8a-dihydroxy-4a,5-bis(hydroxymethyl)-2-methyl-tetrahydro-2H-spiro[naphthalene-1,3'-oxolane]-2',4-dione

CAS Registry Number

Not Available

SMILES

C[C@@H]1CC(=O)[C@@]2(CO)[C@@](O)(CO)CCC[C@@]2(O)[C@@]11C[C@@H](OC1=O)C1=COC=C1

InChI Identifier

InChI=1S/C20H26O8/c1-12-7-15(23)19(11-22)17(25,10-21)4-2-5-20(19,26)18(12)8-14(28-16(18)24)13-3-6-27-9-13/h3,6,9,12,14,21-22,25-26H,2,4-5,7-8,10-11H2,1H3/t12-,14-,17+,18+,19+,20-/m1/s1

InChI Key

RXDUFGKJOZHMHQ-AYSXHUKSSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Teucrium sandrasicum	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as diterpene lactones. These are diterpenoids containing a lactone moiety.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Terpene lactones

Direct Parent

Diterpene lactones

Alternative Parents

Substituents

Diterpene lactone
Diterpenoid
Clerodane diterpenoid
Gamma butyrolactone
Cyclic alcohol
Heteroaromatic compound
Furan
Tetrahydrofuran
Tertiary alcohol
Carboxylic acid ester
Ketone
Lactone
Carboxylic acid derivative
Oxacycle
Organoheterocyclic compound
Monocarboxylic acid or derivatives
Hydrocarbon derivative
Organic oxide
Organic oxygen compound
Carbonyl group
Primary alcohol
Organooxygen compound
Alcohol
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	-0.32	ChemAxon
pKa (Strongest Acidic)	13.01	ChemAxon
pKa (Strongest Basic)	-2.9	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	4	ChemAxon
Polar Surface Area	137.43 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	95.24 m³·mol⁻¹	ChemAxon
Polarizability	39.04 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

8748075

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

10572688

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Plantone D, Locci S, Bergantini L, Manco C, Cortese R, Meocci M, Cavallaro D, d'Alessandro M, Bargagli E, De Stefano N: Brain neuronal and glial damage during acute COVID-19 infection in absence of clinical neurological manifestations. J Neurol Neurosurg Psychiatry. 2022 Sep 22. pii: jnnp-2022-329933. doi: 10.1136/jnnp-2022-329933. [PubMed:36137741 ]
Li D, Que Y, Ding S, Hu G, Wang W, Mao X, Wang Y, Li C, Huang L, Zhou J, Zhang W, Xiao M: Anti-BCMA CAR-T cells therapy for a patient with extremely high membrane BCMA expression: a case report. J Immunother Cancer. 2022 Sep;10(9):e005403. doi: 10.1136/jitc-2022-005403. [PubMed:36137648 ]
Kunitomo K, Shimizu T, Tsuji T, Inoue Y: Hyperintense central pontine lesion in intravascular large B-cell lymphoma. BMJ Case Rep. 2022 Sep 22;15(9):e250945. doi: 10.1136/bcr-2022-250945. [PubMed:36137641 ]
Godet C, Cadranel J, Frat JP, Ragot S, Couturaud F: Reply to: Nebulised liposomal amphotericin-B: a promising strategy for preventing ABPA relapse. Eur Respir J. 2022 Nov 24;60(5):2201678. doi: 10.1183/13993003.01678-2022. Print 2022 Nov. [PubMed:36137593 ]
Son K, Jamil R, Chowdhury A, Mukherjee M, Venegas C, Miyasaki K, Zhang K, Patel Z, Salter B, Yuen ACY, Lau KS, Cowbrough B, Radford K, Huang C, Kjarsgaard M, Dvorkin-Gheva A, Smith J, Li QZ, Waserman S, Ryerson CJ, Nair P, Ho T, Balakrishnan N, Nazy I, Bowdish DM, Svenningsen S, Carlsten C, Mukherjee M: Circulating anti-nuclear autoantibodies in COVID-19 survivors predict long-COVID symptoms. Eur Respir J. 2022 Sep 22:2200970. doi: 10.1183/13993003.00970-2022. [PubMed:36137590 ]
LOTUS database [Link]

Showing NP-Card for (1r,2r,4ar,5r,5'r,8as)-5'-(furan-3-yl)-5,8a-dihydroxy-4a,5-bis(hydroxymethyl)-2-methyl-tetrahydro-2h-spiro[naphthalene-1,3'-oxolane]-2',4-dione (NP0308394)

MOL for NP0308394 ((1r,2r,4ar,5r,5'r,8as)-5'-(furan-3-yl)-5,8a-dihydroxy-4a,5-bis(hydroxymethyl)-2-methyl-tetrahydro-2h-spiro[naphthalene-1,3'-oxolane]-2',4-dione)

3D MOL for NP0308394 ((1r,2r,4ar,5r,5'r,8as)-5'-(furan-3-yl)-5,8a-dihydroxy-4a,5-bis(hydroxymethyl)-2-methyl-tetrahydro-2h-spiro[naphthalene-1,3'-oxolane]-2',4-dione)

3D SDF for NP0308394 ((1r,2r,4ar,5r,5'r,8as)-5'-(furan-3-yl)-5,8a-dihydroxy-4a,5-bis(hydroxymethyl)-2-methyl-tetrahydro-2h-spiro[naphthalene-1,3'-oxolane]-2',4-dione)

3D-SDF for NP0308394 ((1r,2r,4ar,5r,5'r,8as)-5'-(furan-3-yl)-5,8a-dihydroxy-4a,5-bis(hydroxymethyl)-2-methyl-tetrahydro-2h-spiro[naphthalene-1,3'-oxolane]-2',4-dione)

PDB for NP0308394 ((1r,2r,4ar,5r,5'r,8as)-5'-(furan-3-yl)-5,8a-dihydroxy-4a,5-bis(hydroxymethyl)-2-methyl-tetrahydro-2h-spiro[naphthalene-1,3'-oxolane]-2',4-dione)

3D PDB for NP0308394 ((1r,2r,4ar,5r,5'r,8as)-5'-(furan-3-yl)-5,8a-dihydroxy-4a,5-bis(hydroxymethyl)-2-methyl-tetrahydro-2h-spiro[naphthalene-1,3'-oxolane]-2',4-dione)

SMILES for NP0308394 ((1r,2r,4ar,5r,5'r,8as)-5'-(furan-3-yl)-5,8a-dihydroxy-4a,5-bis(hydroxymethyl)-2-methyl-tetrahydro-2h-spiro[naphthalene-1,3'-oxolane]-2',4-dione)

INCHI for NP0308394 ((1r,2r,4ar,5r,5'r,8as)-5'-(furan-3-yl)-5,8a-dihydroxy-4a,5-bis(hydroxymethyl)-2-methyl-tetrahydro-2h-spiro[naphthalene-1,3'-oxolane]-2',4-dione)

Structure for NP0308394 ((1r,2r,4ar,5r,5'r,8as)-5'-(furan-3-yl)-5,8a-dihydroxy-4a,5-bis(hydroxymethyl)-2-methyl-tetrahydro-2h-spiro[naphthalene-1,3'-oxolane]-2',4-dione)

3D Structure for NP0308394 ((1r,2r,4ar,5r,5'r,8as)-5'-(furan-3-yl)-5,8a-dihydroxy-4a,5-bis(hydroxymethyl)-2-methyl-tetrahydro-2h-spiro[naphthalene-1,3'-oxolane]-2',4-dione)