NP-MRD: Showing NP-Card for 4-[(2s,3s,4r,5r)-5-(3,4-dimethoxyphenyl)-3,4-dimethyloxolan-2-yl]-2-methoxyphenol (NP0307854)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

2.0

Created at

2022-09-11 01:16:31 UTC

Updated at

2022-09-11 01:16:31 UTC

NP-MRD ID

NP0307854

Secondary Accession Numbers

None

Natural Product Identification

Common Name

4-[(2s,3s,4r,5r)-5-(3,4-dimethoxyphenyl)-3,4-dimethyloxolan-2-yl]-2-methoxyphenol

Description

Nectandrin A belongs to the class of organic compounds known as 7,7'-epoxylignans. These are lignans with a structure based on a 2,5-diaryl-3, 4-dimethyltetrahydrofuran skeleton. 4-[(2s,3s,4r,5r)-5-(3,4-dimethoxyphenyl)-3,4-dimethyloxolan-2-yl]-2-methoxyphenol is found in Machilus thunbergii, Myristica fragrans, Nectandra megapotamica, Nectandra oppositifolia, Piper mullesua and Virola surinamensis. 4-[(2s,3s,4r,5r)-5-(3,4-dimethoxyphenyl)-3,4-dimethyloxolan-2-yl]-2-methoxyphenol was first documented in 2005 (PMID: 15684486). Based on a literature review a small amount of articles have been published on nectandrin A (PMID: 20541406) (PMID: 26184150) (PMID: 24227947).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309112203162D          

 26 28  0  0  1  0            999 V2000
    2.1434    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3819   -1.7224    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1270   -2.5070    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.6119   -3.1745    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4324   -3.0882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9173   -3.7557    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5817   -4.5094    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0667   -5.1768    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.8871   -5.0906    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7613   -4.5956    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4257   -5.3493    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6052   -5.4355    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2763   -3.9282    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3020   -2.5070    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.1830   -3.1745    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0470   -1.7224    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.7376   -1.4675    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  6  5  1  1  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  1  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 12 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 15 18  2  0  0  0  0
  9 18  1  0  0  0  0
  8 19  1  0  0  0  0
 19 20  1  6  0  0  0
 19 21  1  0  0  0  0
  6 21  1  0  0  0  0
 21 22  1  6  0  0  0
  5 23  2  0  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
  3 25  1  0  0  0  0
 25 26  1  0  0  0  0
M  END

     RDKit          3D

 52 54  0  0  0  0  0  0  0  0999 V2000
    4.3787    2.5447   -1.4618 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2017    1.7161   -0.6537 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6556    0.6479    0.0387 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2899    0.3571   -0.0370 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7483   -0.7045    0.6514 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3418   -1.0596    0.6164 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.4734    0.0282    0.7484 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7613   -0.6648    0.6694 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.9033    0.2396    0.6536 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9142    1.2952    1.5433 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9629    2.1853    1.5812 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0268    2.0461    0.7340 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0952    2.9277    0.7511 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0661    3.9927    1.6762 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0489    0.9999   -0.1703 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1388    0.8788   -1.0199 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1272   -0.2074   -1.9351 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9856    0.1240   -0.1861 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6345   -1.5859   -0.4999 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.1080   -2.9842   -0.1638 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8851   -1.6213   -0.7129 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.3793   -3.0343   -0.8617 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6111   -1.4634    1.4147 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9652   -1.1831    1.4959 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4905   -0.1211    0.8037 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8549    0.1974    0.8580 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0079    3.3779   -1.8061 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5114    2.8853   -0.8824 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0718    1.9542   -2.3399 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6439    0.9761   -0.6472 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0351   -1.7887    1.3885 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7598   -1.3153    1.5933 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0748    1.4302    2.2332 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9120    2.9991    2.3077 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2315    4.6809    1.3735 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8786    3.5855    2.6976 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9906    4.5815    1.6507 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1828   -0.1449   -2.5347 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0295   -0.2020   -2.5762 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0479   -1.1474   -1.3408 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0261   -0.6740   -0.8907 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1508   -1.2484   -1.4158 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7941   -3.6841   -0.9394 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7065   -3.2900    0.8409 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2185   -2.9745   -0.1141 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1883   -1.0035   -1.5572 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0388   -3.4778   -1.8103 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4843   -2.9859   -0.9115 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1339   -3.6358    0.0330 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2588   -2.3160    1.9856 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6163   -1.8033    2.1080 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.5103   -0.3299    1.4006 H   0  0  0  0  0  0  0  0  0  0  0  0
 14 13  1  0
 13 12  1  0
 12 11  2  0
 11 10  1  0
 10  9  2  0
  9 18  1  0
 18 15  2  0
 15 16  1  0
 16 17  1  0
  9  8  1  0
  8  7  1  0
  7  6  1  0
  6 21  1  0
 21 22  1  0
 21 19  1  0
 19 20  1  0
  6  5  1  0
  5 23  2  0
 23 24  1  0
 24 25  2  0
 25 26  1  0
 25  3  1  0
  3  2  1  0
  2  1  1  0
  3  4  2  0
 15 12  1  0
 19  8  1  0
  4  5  1  0
 14 35  1  0
 14 36  1  0
 14 37  1  0
 11 34  1  0
 10 33  1  0
 18 41  1  0
 17 38  1  0
 17 39  1  0
 17 40  1  0
  8 32  1  1
  6 31  1  1
 21 46  1  6
 22 47  1  0
 22 48  1  0
 22 49  1  0
 19 42  1  6
 20 43  1  0
 20 44  1  0
 20 45  1  0
 23 50  1  0
 24 51  1  0
 26 52  1  0
  1 27  1  0
  1 28  1  0
  1 29  1  0
  4 30  1  0
M  END


  Mrv1652309112203162D          

 26 28  0  0  1  0            999 V2000
    2.1434    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3819   -1.7224    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1270   -2.5070    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.6119   -3.1745    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4324   -3.0882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9173   -3.7557    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5817   -4.5094    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0667   -5.1768    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.8871   -5.0906    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7613   -4.5956    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4257   -5.3493    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6052   -5.4355    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2763   -3.9282    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3020   -2.5070    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.1830   -3.1745    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0470   -1.7224    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.7376   -1.4675    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  6  5  1  1  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  1  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 12 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 15 18  2  0  0  0  0
  9 18  1  0  0  0  0
  8 19  1  0  0  0  0
 19 20  1  6  0  0  0
 19 21  1  0  0  0  0
  6 21  1  0  0  0  0
 21 22  1  6  0  0  0
  5 23  2  0  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
  3 25  1  0  0  0  0
 25 26  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0307854

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=CC=C(C=C1OC)[C@@H]1O[C@@H]([C@@H](C)[C@H]1C)C1=CC=C(O)C(OC)=C1

> <INCHI_IDENTIFIER>
InChI=1S/C21H26O5/c1-12-13(2)21(15-7-9-17(23-3)19(11-15)25-5)26-20(12)14-6-8-16(22)18(10-14)24-4/h6-13,20-22H,1-5H3/t12-,13+,20-,21+/m0/s1

> <INCHI_KEY>
YPQNDHHCUQGPFN-WVGOSAFVSA-N

> <FORMULA>
C21H26O5

> <MOLECULAR_WEIGHT>
358.434

> <EXACT_MASS>
358.178023937

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
52

> <JCHEM_AVERAGE_POLARIZABILITY>
39.19425243071347

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
4-[(2S,3S,4R,5R)-5-(3,4-dimethoxyphenyl)-3,4-dimethyloxolan-2-yl]-2-methoxyphenol

> <JCHEM_LOGP>
4.052193810333332

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
9.910800516313147

> <JCHEM_PKA_STRONGEST_BASIC>
-4.01458969473641

> <JCHEM_POLAR_SURFACE_AREA>
57.150000000000006

> <JCHEM_REFRACTIVITY>
99.43280000000003

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
4-[(2S,3S,4R,5R)-5-(3,4-dimethoxyphenyl)-3,4-dimethyloxolan-2-yl]-2-methoxyphenol

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 11-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   11-SEP-22         0                                  
HETATM    1  C   UNK     0       4.001   3.850   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       4.001   2.310   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       2.667   1.540   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       2.667  -0.000   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       1.334  -2.310   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0       2.580  -3.215   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0       2.104  -4.680   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       3.009  -5.926   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       4.540  -5.765   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       5.446  -7.011   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       4.819  -8.417   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0       5.724  -9.663   0.000  0.00  0.00           O+0
HETATM   14  C   UNK     0       7.256  -9.502   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       3.288  -8.578   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0       2.661  -9.985   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0       1.130 -10.146   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       2.382  -7.333   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       0.564  -4.680   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -0.342  -5.926   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       0.088  -3.215   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -1.377  -2.739   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       0.000  -0.000   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       0.000   1.540   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       1.334   2.310   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0       1.334   3.850   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   25                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6   23                                                  
CONECT    6    5    7   21                                                  
CONECT    7    6    8                                                       
CONECT    8    7    9   19                                                  
CONECT    9    8   10   18                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13   15                                                  
CONECT   13   12   14                                                       
CONECT   14   13                                                            
CONECT   15   12   16   18                                                  
CONECT   16   15   17                                                       
CONECT   17   16                                                            
CONECT   18   15    9                                                       
CONECT   19    8   20   21                                                  
CONECT   20   19                                                            
CONECT   21   19    6   22                                                  
CONECT   22   21                                                            
CONECT   23    5   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24    3   26                                                  
CONECT   26   25                                                            
MASTER        0    0    0    0    0    0    0    0   26    0   56    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₁H₂₆O₅

Average Mass

358.4340 Da

Monoisotopic Mass

358.17802 Da

IUPAC Name

4-[(2S,3S,4R,5R)-5-(3,4-dimethoxyphenyl)-3,4-dimethyloxolan-2-yl]-2-methoxyphenol

Traditional Name

4-[(2S,3S,4R,5R)-5-(3,4-dimethoxyphenyl)-3,4-dimethyloxolan-2-yl]-2-methoxyphenol

CAS Registry Number

Not Available

SMILES

COC1=CC=C(C=C1OC)[C@@H]1O[C@@H]([C@@H](C)[C@H]1C)C1=CC=C(O)C(OC)=C1

InChI Identifier

InChI=1S/C21H26O5/c1-12-13(2)21(15-7-9-17(23-3)19(11-15)25-5)26-20(12)14-6-8-16(22)18(10-14)24-4/h6-13,20-22H,1-5H3/t12-,13+,20-,21+/m0/s1

InChI Key

YPQNDHHCUQGPFN-WVGOSAFVSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Machilus thunbergii	LOTUS Database	35616633
Myristica fragrans	LOTUS Database	35616633
Nectandra megapotamica	LOTUS Database	35616633
Nectandra oppositifolia	LOTUS Database	35616633
Piper mullesua	LOTUS Database	35616633
Virola surinamensis	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as 7,7'-epoxylignans. These are lignans with a structure based on a 2,5-diaryl-3, 4-dimethyltetrahydrofuran skeleton.

Kingdom

Organic compounds

Super Class

Lignans, neolignans and related compounds

Class

Furanoid lignans

Sub Class

Tetrahydrofuran lignans

Direct Parent

7,7'-epoxylignans

Alternative Parents

Substituents

7,7p-epoxylignan
Dibenzylbutane lignan skeleton
Methoxyphenol
Dimethoxybenzene
O-dimethoxybenzene
Methoxybenzene
Anisole
Phenoxy compound
Phenol ether
1-hydroxy-2-unsubstituted benzenoid
Phenol
Alkyl aryl ether
Monocyclic benzene moiety
Benzenoid
Oxolane
Ether
Organoheterocyclic compound
Dialkyl ether
Oxacycle
Organic oxygen compound
Hydrocarbon derivative
Organooxygen compound
Aromatic heteromonocyclic compound

Molecular Framework

Aromatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	4.05	ChemAxon
pKa (Strongest Acidic)	9.91	ChemAxon
pKa (Strongest Basic)	-4	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	57.15 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	99.43 m³·mol⁻¹	ChemAxon
Polarizability	39.19 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00043755

Chemspider ID

10307986

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

13939326

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Nguyen PH, Le TV, Kang HW, Chae J, Kim SK, Kwon KI, Seo DB, Lee SJ, Oh WK: AMP-activated protein kinase (AMPK) activators from Myristica fragrans (nutmeg) and their anti-obesity effect. Bioorg Med Chem Lett. 2010 Jul 15;20(14):4128-31. doi: 10.1016/j.bmcl.2010.05.067. Epub 2010 Jun 10. [PubMed:20541406 ]
Ponci V, Figueiredo CR, Massaoka MH, de Farias CF, Matsuo AL, Sartorelli P, Lago JH: Neolignans from Nectandra megapotamica (Lauraceae) Display in vitro Cytotoxic Activity and Induce Apoptosis in Leukemia Cells. Molecules. 2015 Jul 15;20(7):12757-68. doi: 10.3390/molecules200712757. [PubMed:26184150 ]
Kim DY, Kim GW, Chung SH: Nectandrin A Enhances the BMP-Induced Osteoblastic Differentiation and Mineralization by Activation of p38 MAPK-Smad Signaling Pathway. Korean J Physiol Pharmacol. 2013 Oct;17(5):447-53. doi: 10.4196/kjpp.2013.17.5.447. Epub 2013 Oct 17. [PubMed:24227947 ]
Zhai H, Inoue T, Moriyama M, Esumi T, Mitsumoto Y, Fukuyama Y: Neuroprotective effects of 2,5-diaryl-3,4-dimethyltetrahydrofuran neolignans. Biol Pharm Bull. 2005 Feb;28(2):289-93. doi: 10.1248/bpb.28.289. [PubMed:15684486 ]
LOTUS database [Link]

Showing NP-Card for 4-[(2s,3s,4r,5r)-5-(3,4-dimethoxyphenyl)-3,4-dimethyloxolan-2-yl]-2-methoxyphenol (NP0307854)

MOL for NP0307854 (4-[(2s,3s,4r,5r)-5-(3,4-dimethoxyphenyl)-3,4-dimethyloxolan-2-yl]-2-methoxyphenol)

3D MOL for NP0307854 (4-[(2s,3s,4r,5r)-5-(3,4-dimethoxyphenyl)-3,4-dimethyloxolan-2-yl]-2-methoxyphenol)

3D SDF for NP0307854 (4-[(2s,3s,4r,5r)-5-(3,4-dimethoxyphenyl)-3,4-dimethyloxolan-2-yl]-2-methoxyphenol)

3D-SDF for NP0307854 (4-[(2s,3s,4r,5r)-5-(3,4-dimethoxyphenyl)-3,4-dimethyloxolan-2-yl]-2-methoxyphenol)

PDB for NP0307854 (4-[(2s,3s,4r,5r)-5-(3,4-dimethoxyphenyl)-3,4-dimethyloxolan-2-yl]-2-methoxyphenol)

3D PDB for NP0307854 (4-[(2s,3s,4r,5r)-5-(3,4-dimethoxyphenyl)-3,4-dimethyloxolan-2-yl]-2-methoxyphenol)

SMILES for NP0307854 (4-[(2s,3s,4r,5r)-5-(3,4-dimethoxyphenyl)-3,4-dimethyloxolan-2-yl]-2-methoxyphenol)

INCHI for NP0307854 (4-[(2s,3s,4r,5r)-5-(3,4-dimethoxyphenyl)-3,4-dimethyloxolan-2-yl]-2-methoxyphenol)

Structure for NP0307854 (4-[(2s,3s,4r,5r)-5-(3,4-dimethoxyphenyl)-3,4-dimethyloxolan-2-yl]-2-methoxyphenol)

3D Structure for NP0307854 (4-[(2s,3s,4r,5r)-5-(3,4-dimethoxyphenyl)-3,4-dimethyloxolan-2-yl]-2-methoxyphenol)