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Record Information
Version2.0
Created at2022-09-10 23:29:28 UTC
Updated at2022-09-10 23:29:28 UTC
NP-MRD IDNP0306786
Secondary Accession NumbersNone
Natural Product Identification
Common Name2-amino-4-{6-[(3-methylbut-2-en-1-yl)imino]-9h-purin-3-yl}butanoic acid
DescriptionDiscadenine belongs to the class of organic compounds known as alpha amino acids. These are amino acids in which the amino group is attached to the carbon atom immediately adjacent to the carboxylate group (alpha carbon). 2-amino-4-{6-[(3-methylbut-2-en-1-yl)imino]-9h-purin-3-yl}butanoic acid is found in Dictyostelium discoideum. 2-amino-4-{6-[(3-methylbut-2-en-1-yl)imino]-9h-purin-3-yl}butanoic acid was first documented in 2008 (PMID: 18216168). Based on a literature review a small amount of articles have been published on Discadenine (PMID: 31694277) (PMID: 28665127) (PMID: 23494301).
Structure
Thumb
Synonyms
ValueSource
3-(3-Amino-3-carboxypropyl)-N(6)-delta(2)-isopentenyl-adenineMeSH
Chemical FormulaC14H20N6O2
Average Mass304.3540 Da
Monoisotopic Mass304.16477 Da
IUPAC Name2-amino-4-{6-[(3-methylbut-2-en-1-yl)imino]-6,9-dihydro-3H-purin-3-yl}butanoic acid
Traditional Name2-amino-4-{6-[(3-methylbut-2-en-1-yl)imino]-9H-purin-3-yl}butanoic acid
CAS Registry NumberNot Available
SMILES
CC(C)=CCN=C1N=CN(CCC(N)C(O)=O)C2=C1N=CN2
InChI Identifier
InChI=1S/C14H20N6O2/c1-9(2)3-5-16-12-11-13(18-7-17-11)20(8-19-12)6-4-10(15)14(21)22/h3,7-8,10H,4-6,15H2,1-2H3,(H,17,18)(H,21,22)
InChI KeyVSABNZFZVFUZGA-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Dictyostelium discoideumLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as alpha amino acids. These are amino acids in which the amino group is attached to the carbon atom immediately adjacent to the carboxylate group (alpha carbon).
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentAlpha amino acids
Alternative Parents
Substituents
  • Alpha-amino acid
  • Purine
  • Imidazopyrimidine
  • Pyrimidine
  • Heteroaromatic compound
  • Imidazole
  • Azole
  • Amino acid
  • Azacycle
  • Organoheterocyclic compound
  • Monocarboxylic acid or derivatives
  • Carboxylic acid
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Primary amine
  • Organooxygen compound
  • Organonitrogen compound
  • Primary aliphatic amine
  • Carbonyl group
  • Amine
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-2.7ChemAxon
pKa (Strongest Acidic)1.28ChemAxon
pKa (Strongest Basic)8.89ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area119.96 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity83.45 m³·mol⁻¹ChemAxon
Polarizability32.96 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound135398674
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Aoki MM, Kisiala AB, Li S, Stock NL, Brunetti CR, Huber RJ, Emery RJN: Cytokinin Detection during the Dictyostelium discoideum Life Cycle: Profiles Are Dynamic and Affect Cell Growth and Spore Germination. Biomolecules. 2019 Nov 5;9(11):702. doi: 10.3390/biom9110702. [PubMed:31694277 ]
  2. Mik V, Mickova Z, Dolezal K, Frebort I, Pospisil T: Activity of (+)-Discadenine as a Plant Cytokinin. J Nat Prod. 2017 Jul 28;80(7):2136-2140. doi: 10.1021/acs.jnatprod.6b01165. Epub 2017 Jun 30. [PubMed:28665127 ]
  3. Loomis WF: Comparative genomics of the dictyostelids. Methods Mol Biol. 2013;983:39-58. doi: 10.1007/978-1-62703-302-2_3. [PubMed:23494301 ]
  4. Anjard C, Loomis WF: Cytokinins induce sporulation in Dictyostelium. Development. 2008 Mar;135(5):819-27. doi: 10.1242/dev.018051. Epub 2008 Jan 23. [PubMed:18216168 ]
  5. LOTUS database [Link]