NP-MRD: Showing NP-Card for (6s)-6,8-dimethyl-5,7,17-triazatetracyclo[8.7.0.0²,⁷.0¹¹,¹⁶]heptadeca-1,8,10,12,14,16-hexaene (NP0306547)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

2.0

Created at

2022-09-10 23:05:10 UTC

Updated at

2022-09-10 23:05:11 UTC

NP-MRD ID

NP0306547

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(6s)-6,8-dimethyl-5,7,17-triazatetracyclo[8.7.0.0²,⁷.0¹¹,¹⁶]heptadeca-1,8,10,12,14,16-hexaene

Description

(6S)-6,8-dimethyl-5,7,17-triazatetracyclo[8.7.0.0²,⁷.0¹¹,¹⁶]Heptadeca-1,8,10,12,14,16-hexaene belongs to the class of organic compounds known as beta carbolines. Beta carbolines are compounds containing a 9H-pyrido[3,4-b]indole moiety. Based on a literature review very few articles have been published on (6S)-6,8-dimethyl-5,7,17-triazatetracyclo[8.7.0.0²,⁷.0¹¹,¹⁶]Heptadeca-1,8,10,12,14,16-hexaene.

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 36 39  0  0  0  0  0  0  0  0999 V2000
   -1.8924    2.5639    0.5369 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9810    1.3923    0.3201 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3832    1.6219    0.2745 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2978    0.6174    0.0886 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6605    0.4986   -0.0037 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6826    1.4146    0.0616 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9906    0.9842   -0.0694 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2974   -0.3524   -0.2655 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2772   -1.2658   -0.3305 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9760   -0.8248   -0.1985 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8383   -1.5630   -0.2335 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.7890   -0.7422   -0.0648 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5807   -0.9017   -0.0095 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4430    0.1246    0.1757 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8612   -0.1016    0.2159 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.5929    0.6828   -0.8653 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2673   -1.4498    0.0805 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4027   -2.4610    0.5764 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0804   -2.3097   -0.1550 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4905    3.2040    1.3813 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8946    3.2594   -0.3298 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8827    2.2523    0.8866 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7898    2.6350    0.3876 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4470    2.4752    0.2168 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8194    1.6691   -0.0242 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3047   -0.7223   -0.3715 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4957   -2.3136   -0.4830 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2011    0.2602    1.2274 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5193    1.0843   -0.4060 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9687    1.4087   -1.3831 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9721   -0.0069   -1.6784 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4458   -1.6577   -0.9425 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8140   -3.4456    0.2607 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2677   -2.4988    1.6542 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3523   -2.9847    0.3285 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1387   -2.5468   -1.2135 H   0  0  0  0  0  0  0  0  0  0  0  0
 16 15  1  0
 15 17  1  0
 17 18  1  0
 18 19  1  0
 19 13  1  0
 13 12  2  0
 12 11  1  0
 11 10  2  0
 10  9  1  0
  9  8  2  0
  8  7  1  0
  7  6  2  0
  6  5  1  0
  5  4  2  0
  4  3  1  0
  3  2  2  0
  2  1  1  0
  2 14  1  0
 14 15  1  0
 14 13  1  0
  4 12  1  0
  5 10  1  0
 16 29  1  0
 16 30  1  0
 16 31  1  0
 15 28  1  1
 17 32  1  0
 18 33  1  0
 18 34  1  0
 19 35  1  0
 19 36  1  0
  9 27  1  0
  8 26  1  0
  7 25  1  0
  6 24  1  0
  3 23  1  0
  1 20  1  0
  1 21  1  0
  1 22  1  0
M  END


  Mrv1652309112201052D          

 19 22  0  0  1  0            999 V2000
    1.2488   -1.7038    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6198   -0.9670    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4434   -0.9198    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8144   -0.1829    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6103    0.0344    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3043   -0.4116    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0376   -0.0335    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0768    0.7906    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3828    1.2366    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6495    0.8585    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8779    1.1504    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.3618    0.5068    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5381    0.4596    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1671   -0.2772    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.3435   -0.3244    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.0275   -1.0613    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1092    0.3654    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.2618    1.1022    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0855    1.1494    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  4  5  2  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  7  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
  5 10  1  0  0  0  0
 10 11  2  0  0  0  0
 11 12  1  0  0  0  0
  4 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
  2 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  1  0  0  0
 15 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 13 19  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0306547

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@H]1NCCC2=C3N=C4C=CC=CC4=C3C=C(C)N12

> <INCHI_IDENTIFIER>
InChI=1S/C16H17N3/c1-10-9-13-12-5-3-4-6-14(12)18-16(13)15-7-8-17-11(2)19(10)15/h3-6,9,11,17H,7-8H2,1-2H3/t11-/m0/s1

> <INCHI_KEY>
VBMLQDYYOPHOCB-NSHDSACASA-N

> <FORMULA>
C16H17N3

> <MOLECULAR_WEIGHT>
251.333

> <EXACT_MASS>
251.142247559

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
36

> <JCHEM_AVERAGE_POLARIZABILITY>
29.164238954916563

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(6S)-6,8-dimethyl-5,7,17-triazatetracyclo[8.7.0.0^{2,7}.0^{11,16}]heptadeca-1,8,10,12,14,16-hexaene

> <JCHEM_LOGP>
2.71576763

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA_STRONGEST_BASIC>
8.91498167515183

> <JCHEM_POLAR_SURFACE_AREA>
29.85

> <JCHEM_REFRACTIVITY>
76.53639999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(6S)-6,8-dimethyl-5,7,17-triazatetracyclo[8.7.0.0^{2,7}.0^{11,16}]heptadeca-1,8,10,12,14,16-hexaene

> <JCHEM_VEBER_RULE>
1

$$$$

HEADER    PROTEIN                                 11-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   11-SEP-22         0                                  
HETATM    1  C   UNK     0       2.331  -3.180   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       3.024  -1.805   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       4.561  -1.717   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       5.254  -0.341   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       6.739   0.064   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       8.035  -0.768   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       9.404  -0.063   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       9.477   1.476   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       8.181   2.308   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       6.812   1.603   0.000  0.00  0.00           C+0
HETATM   11  N   UNK     0       5.372   2.147   0.000  0.00  0.00           N+0
HETATM   12  C   UNK     0       4.409   0.946   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       2.871   0.858   0.000  0.00  0.00           C+0
HETATM   14  N   UNK     0       2.179  -0.517   0.000  0.00  0.00           N+0
HETATM   15  C   UNK     0       0.641  -0.606   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      -0.051  -1.981   0.000  0.00  0.00           C+0
HETATM   17  N   UNK     0      -0.204   0.682   0.000  0.00  0.00           N+0
HETATM   18  C   UNK     0       0.489   2.057   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       2.026   2.146   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   14                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5   12                                                  
CONECT    5    4    6   10                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9    5   11                                                  
CONECT   11   10   12                                                       
CONECT   12   11    4   13                                                  
CONECT   13   12   14   19                                                  
CONECT   14   13    2   15                                                  
CONECT   15   14   16   17                                                  
CONECT   16   15                                                            
CONECT   17   15   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   13                                                       
MASTER        0    0    0    0    0    0    0    0   19    0   44    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₆H₁₇N₃

Average Mass

251.3330 Da

Monoisotopic Mass

251.14225 Da

IUPAC Name

(6S)-6,8-dimethyl-5,7,17-triazatetracyclo[8.7.0.0^{2,7}.0^{11,16}]heptadeca-1,8,10,12,14,16-hexaene

Traditional Name

(6S)-6,8-dimethyl-5,7,17-triazatetracyclo[8.7.0.0^{2,7}.0^{11,16}]heptadeca-1,8,10,12,14,16-hexaene

CAS Registry Number

Not Available

SMILES

C[C@H]1NCCC2=C3N=C4C=CC=CC4=C3C=C(C)N12

InChI Identifier

InChI=1S/C16H17N3/c1-10-9-13-12-5-3-4-6-14(12)18-16(13)15-7-8-17-11(2)19(10)15/h3-6,9,11,17H,7-8H2,1-2H3/t11-/m0/s1

InChI Key

VBMLQDYYOPHOCB-NSHDSACASA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as beta carbolines. Beta carbolines are compounds containing a 9H-pyrido[3,4-b]indole moiety.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Indoles and derivatives

Sub Class

Pyridoindoles

Direct Parent

Beta carbolines

Alternative Parents

Substituents

Beta-carboline
Pyridopyrimidine
Indole
Methylpyridine
Pyridine
Pyrimidine
Benzenoid
Heteroaromatic compound
Pyrrole
Azacycle
Secondary aliphatic amine
Secondary amine
Amine
Hydrocarbon derivative
Organonitrogen compound
Organopnictogen compound
Organic nitrogen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.72	ChemAxon
pKa (Strongest Basic)	8.91	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	29.85 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	76.54 m³·mol⁻¹	ChemAxon
Polarizability	29.16 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

163195307

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (6s)-6,8-dimethyl-5,7,17-triazatetracyclo[8.7.0.0²,⁷.0¹¹,¹⁶]heptadeca-1,8,10,12,14,16-hexaene (NP0306547)

MOL for NP0306547 ((6s)-6,8-dimethyl-5,7,17-triazatetracyclo[8.7.0.0²,⁷.0¹¹,¹⁶]heptadeca-1,8,10,12,14,16-hexaene)

3D MOL for NP0306547 ((6s)-6,8-dimethyl-5,7,17-triazatetracyclo[8.7.0.0²,⁷.0¹¹,¹⁶]heptadeca-1,8,10,12,14,16-hexaene)

3D SDF for NP0306547 ((6s)-6,8-dimethyl-5,7,17-triazatetracyclo[8.7.0.0²,⁷.0¹¹,¹⁶]heptadeca-1,8,10,12,14,16-hexaene)

3D-SDF for NP0306547 ((6s)-6,8-dimethyl-5,7,17-triazatetracyclo[8.7.0.0²,⁷.0¹¹,¹⁶]heptadeca-1,8,10,12,14,16-hexaene)

PDB for NP0306547 ((6s)-6,8-dimethyl-5,7,17-triazatetracyclo[8.7.0.0²,⁷.0¹¹,¹⁶]heptadeca-1,8,10,12,14,16-hexaene)

3D PDB for NP0306547 ((6s)-6,8-dimethyl-5,7,17-triazatetracyclo[8.7.0.0²,⁷.0¹¹,¹⁶]heptadeca-1,8,10,12,14,16-hexaene)

SMILES for NP0306547 ((6s)-6,8-dimethyl-5,7,17-triazatetracyclo[8.7.0.0²,⁷.0¹¹,¹⁶]heptadeca-1,8,10,12,14,16-hexaene)

INCHI for NP0306547 ((6s)-6,8-dimethyl-5,7,17-triazatetracyclo[8.7.0.0²,⁷.0¹¹,¹⁶]heptadeca-1,8,10,12,14,16-hexaene)

Structure for NP0306547 ((6s)-6,8-dimethyl-5,7,17-triazatetracyclo[8.7.0.0²,⁷.0¹¹,¹⁶]heptadeca-1,8,10,12,14,16-hexaene)

3D Structure for NP0306547 ((6s)-6,8-dimethyl-5,7,17-triazatetracyclo[8.7.0.0²,⁷.0¹¹,¹⁶]heptadeca-1,8,10,12,14,16-hexaene)