| Record Information |
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| Version | 2.0 |
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| Created at | 2022-09-10 22:32:11 UTC |
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| Updated at | 2022-09-10 22:32:11 UTC |
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| NP-MRD ID | NP0306204 |
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| Secondary Accession Numbers | None |
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| Natural Product Identification |
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| Common Name | (4r)-4-{[(2s,3r,4s,5r)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-2-methyl-5,6-dihydro-3h-pyrimidine-4-carboxylic acid |
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| Description | (4R)-4-{[(2S,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-2-methyl-3,4,5,6-tetrahydropyrimidine-4-carboxylic acid belongs to the class of organic compounds known as o-glycosyl compounds. These are glycoside in which a sugar group is bonded through one carbon to another group via a O-glycosidic bond. (4r)-4-{[(2s,3r,4s,5r)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-2-methyl-5,6-dihydro-3h-pyrimidine-4-carboxylic acid is found in Lotus tenuis. Based on a literature review very few articles have been published on (4R)-4-{[(2S,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-2-methyl-3,4,5,6-tetrahydropyrimidine-4-carboxylic acid. |
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| Structure | CC1=NCC[C@@](N1)(O[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O)C(O)=O InChI=1S/C11H18N2O7/c1-5-12-3-2-11(13-5,10(17)18)20-9-8(16)7(15)6(4-14)19-9/h6-9,14-16H,2-4H2,1H3,(H,12,13)(H,17,18)/t6-,7-,8-,9+,11-/m1/s1 |
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| Synonyms | | Value | Source |
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| (4R)-4-{[(2S,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-2-methyl-3,4,5,6-tetrahydropyrimidine-4-carboxylate | Generator |
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| Chemical Formula | C11H18N2O7 |
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| Average Mass | 290.2720 Da |
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| Monoisotopic Mass | 290.11140 Da |
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| IUPAC Name | (4R)-4-{[(2S,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-2-methyl-3,4,5,6-tetrahydropyrimidine-4-carboxylic acid |
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| Traditional Name | (4R)-4-{[(2S,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-2-methyl-5,6-dihydro-3H-pyrimidine-4-carboxylic acid |
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| CAS Registry Number | Not Available |
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| SMILES | CC1=NCC[C@@](N1)(O[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O)C(O)=O |
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| InChI Identifier | InChI=1S/C11H18N2O7/c1-5-12-3-2-11(13-5,10(17)18)20-9-8(16)7(15)6(4-14)19-9/h6-9,14-16H,2-4H2,1H3,(H,12,13)(H,17,18)/t6-,7-,8-,9+,11-/m1/s1 |
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| InChI Key | TUHFNHUGPARRAS-LPZLMQDUSA-N |
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| Experimental Spectra |
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| Not Available | | Predicted Spectra |
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| | Spectrum Type | Description | Depositor ID | Depositor Organization | Depositor | Deposition Date | View |
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| 1D NMR | 13C NMR Spectrum (1D, 25 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 100 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 252 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 50 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 200 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 75 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 300 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 101 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 400 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 126 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 500 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 151 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 600 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 176 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 700 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 201 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 800 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 226 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 900 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum |
| | Chemical Shift Submissions |
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| Not Available | | Species |
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| Species of Origin | |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as o-glycosyl compounds. These are glycoside in which a sugar group is bonded through one carbon to another group via a O-glycosidic bond. |
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| Kingdom | Organic compounds |
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| Super Class | Organic oxygen compounds |
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| Class | Organooxygen compounds |
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| Sub Class | Carbohydrates and carbohydrate conjugates |
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| Direct Parent | O-glycosyl compounds |
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| Alternative Parents | |
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| Substituents | - O-glycosyl compound
- Alpha-amino acid or derivatives
- Pentose monosaccharide
- Hydropyrimidine carboxylic acid derivative
- Hydropyrimidine
- 1,4,5,6-tetrahydropyrimidine
- Monosaccharide
- Imidolactam
- Oxolane
- Secondary alcohol
- Acetal
- Amidine
- Carboxylic acid amidine
- Carboxylic acid derivative
- Carboxylic acid
- Monocarboxylic acid or derivatives
- Oxacycle
- Azacycle
- Organoheterocyclic compound
- Carboximidamide
- Propargyl-type 1,3-dipolar organic compound
- Organic 1,3-dipolar compound
- Carbonyl group
- Organic nitrogen compound
- Organonitrogen compound
- Alcohol
- Organopnictogen compound
- Primary alcohol
- Organic oxide
- Hydrocarbon derivative
- Aliphatic heteromonocyclic compound
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| Molecular Framework | Aliphatic heteromonocyclic compounds |
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| External Descriptors | Not Available |
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| Physical Properties |
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| State | Not Available |
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| Experimental Properties | | Property | Value | Reference |
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| Melting Point | Not Available | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
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| Predicted Properties | |
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