NP-MRD: Showing NP-Card for n-formyldemecolcine (NP0305313)

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Record Information

Version

2.0

Created at

2022-09-10 21:02:40 UTC

Updated at

2022-09-10 21:02:40 UTC

NP-MRD ID

NP0305313

Secondary Accession Numbers

None

Natural Product Identification

Common Name

n-formyldemecolcine

Description

N-Formyldemecolcine belongs to the class of organic compounds known as tropones. Tropones are compounds containing a tropone ring, which is a cycloheptatrienone ring bearing a ketone group. N-Formyldemecolcine is a primary metabolite. Primary metabolites are metabolically or physiologically essential metabolites. They are directly involved in an organism’s growth, development or reproduction. n-formyldemecolcine is found in Colchicum autumnale and Colchicum schimperi. n-formyldemecolcine was first documented in 2020 (PMID: 32699417). Based on a literature review very few articles have been published on N-Formyldemecolcine.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309102223022D          

 29 31  0  0  1  0            999 V2000
    5.3226   -0.6674    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0479    0.1105    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2368    0.2615    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9621    1.0394    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1510    1.1904    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6147    0.5635    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8894   -0.2144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3531   -0.8413    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6279   -1.6192    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7005   -0.3654    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9752   -1.1433    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.7863   -1.2943    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7902    0.5920    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5790   -0.2055    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8238   -0.5377    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0933   -0.1543    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5691   -0.6461    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4743   -1.4656    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0625    0.6559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8600    0.8671    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4738    1.2828    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2984    1.2543    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5096    2.0518    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.8827    2.5882    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.0337    3.3992    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1048    2.3134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5221    2.8497    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2648    2.3839    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9953    2.0006    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  7 10  2  0  0  0  0
  3 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
  6 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 16 19  1  0  0  0  0
 19 20  2  0  0  0  0
 19 21  1  0  0  0  0
 21 22  2  0  0  0  0
 13 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  1  0  0  0
 24 25  1  0  0  0  0
 24 26  1  0  0  0  0
 26 27  2  0  0  0  0
 23 28  1  0  0  0  0
 28 29  1  0  0  0  0
  5 29  1  0  0  0  0
M  END

     RDKit          3D

 54 56  0  0  0  0  0  0  0  0999 V2000
    5.2480   -2.3960   -0.2341 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8216   -1.0757    0.0023 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.4792   -0.7743   -0.0521 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5819   -1.7819   -0.3389 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2717   -1.5112   -0.3994 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8538   -0.1886   -0.1650 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6791    0.8380    0.1250 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1916    2.0992    0.3640 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8682    2.5767    1.6622 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0290    0.5320    0.1794 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9770    1.4879    0.4603 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6224    2.2750   -0.5210 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5311    0.2590   -0.2764 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3697    1.5022   -0.8390 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2889    2.5157   -0.8017 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6327    2.4499   -0.4286 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2844    3.6689   -0.2450 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6372    4.8946   -0.4223 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3634    1.2978   -0.2279 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6216    1.4745   -0.2630 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9463   -0.0187    0.0052 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6618   -0.4858    0.0861 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7656   -1.8532    0.6046 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.0245   -2.4999    0.2877 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9261   -2.7836    1.4212 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4594   -2.8879   -0.9854 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7798   -2.6964   -2.0147 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5957   -2.7465    0.4690 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3233   -2.6408   -0.6876 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8428   -2.7502   -1.2171 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3557   -2.4462   -0.2276 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8113   -3.0332    0.5725 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8947   -2.8163   -0.5240 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7035    2.4067    2.3713 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0327    1.9323    2.0125 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4938    3.6071    1.6461 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4068    1.7211   -1.0627 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0212    3.1777    0.0060 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8139    2.6535   -1.1941 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5572    1.5959   -1.3573 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9376    3.4838   -1.0962 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3402    5.6975   -0.1143 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4133    4.9982   -1.5072 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7040    5.0138    0.1338 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7566   -0.7113    0.1280 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8382   -1.6836    1.7499 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6679   -3.7341    1.9089 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7585   -1.9736    2.1569 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9821   -2.7174    1.1025 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4152   -3.3761   -1.1306 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0059   -2.7037    1.4191 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0155   -3.8007    0.4856 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1420   -2.5066   -1.6605 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9729   -3.5656   -0.6679 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  2  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  7 10  2  0
 10 11  1  0
 11 12  1  0
  6 13  1  0
 13 14  2  0
 14 15  1  0
 15 16  2  0
 16 17  1  0
 17 18  1  0
 16 19  1  0
 19 20  2  0
 19 21  1  0
 21 22  2  0
 22 23  1  0
 23 28  1  0
 28 29  1  0
 23 24  1  0
 24 25  1  0
 24 26  1  0
 26 27  2  0
 10  3  1  0
 22 13  1  0
 29  5  1  0
  1 30  1  0
  1 31  1  0
  1 32  1  0
  4 33  1  0
  9 34  1  0
  9 35  1  0
  9 36  1  0
 12 37  1  0
 12 38  1  0
 12 39  1  0
 14 40  1  0
 15 41  1  0
 18 42  1  0
 18 43  1  0
 18 44  1  0
 21 45  1  0
 23 46  1  1
 28 51  1  0
 28 52  1  0
 29 53  1  0
 29 54  1  0
 25 47  1  0
 25 48  1  0
 25 49  1  0
 26 50  1  0
M  END


  Mrv1652309102223022D          

 29 31  0  0  1  0            999 V2000
    5.3226   -0.6674    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0479    0.1105    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2368    0.2615    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9621    1.0394    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1510    1.1904    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6147    0.5635    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8894   -0.2144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3531   -0.8413    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6279   -1.6192    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7005   -0.3654    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9752   -1.1433    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.7863   -1.2943    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7902    0.5920    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5790   -0.2055    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8238   -0.5377    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0933   -0.1543    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5691   -0.6461    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4743   -1.4656    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0625    0.6559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8600    0.8671    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4738    1.2828    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2984    1.2543    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5096    2.0518    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.8827    2.5882    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.0337    3.3992    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1048    2.3134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5221    2.8497    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2648    2.3839    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9953    2.0006    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  7 10  2  0  0  0  0
  3 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
  6 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 16 19  1  0  0  0  0
 19 20  2  0  0  0  0
 19 21  1  0  0  0  0
 21 22  2  0  0  0  0
 13 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  1  0  0  0
 24 25  1  0  0  0  0
 24 26  1  0  0  0  0
 26 27  2  0  0  0  0
 23 28  1  0  0  0  0
 28 29  1  0  0  0  0
  5 29  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0305313

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=CC2=C(C(OC)=C1OC)C1=CC=C(OC)C(=O)C=C1[C@H](CC2)N(C)C=O

> <INCHI_IDENTIFIER>
InChI=1S/C22H25NO6/c1-23(12-24)16-8-6-13-10-19(27-3)21(28-4)22(29-5)20(13)14-7-9-18(26-2)17(25)11-15(14)16/h7,9-12,16H,6,8H2,1-5H3/t16-/m0/s1

> <INCHI_KEY>
HTWMEJLBEVTMMZ-INIZCTEOSA-N

> <FORMULA>
C22H25NO6

> <MOLECULAR_WEIGHT>
399.443

> <EXACT_MASS>
399.168187529

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
54

> <JCHEM_AVERAGE_POLARIZABILITY>
42.00745619319921

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
N-methyl-N-[(10S)-3,4,5,14-tetramethoxy-13-oxotricyclo[9.5.0.0^{2,7}]hexadeca-1(16),2(7),3,5,11,14-hexaen-10-yl]formamide

> <JCHEM_LOGP>
1.636965928000001

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
17.947011932004525

> <JCHEM_PKA_STRONGEST_BASIC>
-0.9259209667179308

> <JCHEM_POLAR_SURFACE_AREA>
74.30000000000001

> <JCHEM_REFRACTIVITY>
111.78179999999996

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
N-methyl-N-[(10S)-3,4,5,14-tetramethoxy-13-oxotricyclo[9.5.0.0^{2,7}]hexadeca-1(16),2(7),3,5,11,14-hexaen-10-yl]formamide

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 10-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   10-SEP-22         0                                  
HETATM    1  C   UNK     0       9.936  -1.246   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       9.423   0.206   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       7.909   0.488   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       7.396   1.940   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       5.882   2.222   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       4.881   1.052   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       5.394  -0.400   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       4.393  -1.570   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0       4.905  -3.022   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       6.908  -0.682   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0       7.420  -2.134   0.000  0.00  0.00           O+0
HETATM   12  C   UNK     0       8.934  -2.416   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       3.342   1.105   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       2.947  -0.384   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       1.538  -1.004   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       0.174  -0.288   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0      -1.062  -1.206   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0      -0.885  -2.736   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -0.117   1.224   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0      -1.605   1.619   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0       0.885   2.395   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       2.424   2.341   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       2.818   3.830   0.000  0.00  0.00           C+0
HETATM   24  N   UNK     0       1.648   4.831   0.000  0.00  0.00           N+0
HETATM   25  C   UNK     0       1.930   6.345   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       0.196   4.318   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0      -0.975   5.319   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0       4.228   4.450   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       5.591   3.734   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   10                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6   29                                                  
CONECT    6    5    7   13                                                  
CONECT    7    6    8   10                                                  
CONECT    8    7    9                                                       
CONECT    9    8                                                            
CONECT   10    7    3   11                                                  
CONECT   11   10   12                                                       
CONECT   12   11                                                            
CONECT   13    6   14   22                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17   19                                                  
CONECT   17   16   18                                                       
CONECT   18   17                                                            
CONECT   19   16   20   21                                                  
CONECT   20   19                                                            
CONECT   21   19   22                                                       
CONECT   22   21   13   23                                                  
CONECT   23   22   24   28                                                  
CONECT   24   23   25   26                                                  
CONECT   25   24                                                            
CONECT   26   24   27                                                       
CONECT   27   26                                                            
CONECT   28   23   29                                                       
CONECT   29   28    5                                                       
MASTER        0    0    0    0    0    0    0    0   29    0   62    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₂H₂₅NO₆

Average Mass

399.4430 Da

Monoisotopic Mass

399.16819 Da

IUPAC Name

N-methyl-N-[(10S)-3,4,5,14-tetramethoxy-13-oxotricyclo[9.5.0.0^{2,7}]hexadeca-1(16),2(7),3,5,11,14-hexaen-10-yl]formamide

Traditional Name

N-methyl-N-[(10S)-3,4,5,14-tetramethoxy-13-oxotricyclo[9.5.0.0^{2,7}]hexadeca-1(16),2(7),3,5,11,14-hexaen-10-yl]formamide

CAS Registry Number

Not Available

SMILES

COC1=CC2=C(C(OC)=C1OC)C1=CC=C(OC)C(=O)C=C1[C@H](CC2)N(C)C=O

InChI Identifier

InChI=1S/C22H25NO6/c1-23(12-24)16-8-6-13-10-19(27-3)21(28-4)22(29-5)20(13)14-7-9-18(26-2)17(25)11-15(14)16/h7,9-12,16H,6,8H2,1-5H3/t16-/m0/s1

InChI Key

HTWMEJLBEVTMMZ-INIZCTEOSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Colchicum autumnale	LOTUS Database	35616633
Colchicum schimperi	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as tropones. Tropones are compounds containing a tropone ring, which is a cycloheptatrienone ring bearing a ketone group.

Kingdom

Organic compounds

Super Class

Hydrocarbon derivatives

Class

Tropones

Sub Class

Not Available

Direct Parent

Tropones

Alternative Parents

Substituents

Anisole
Tropone
Alkyl aryl ether
Benzenoid
Tertiary carboxylic acid amide
Carboxamide group
Cyclic ketone
Ether
Carboxylic acid derivative
Organopnictogen compound
Organooxygen compound
Organonitrogen compound
Organic nitrogen compound
Carbonyl group
Organic oxide
Organic oxygen compound
Aromatic homopolycyclic compound

Molecular Framework

Aromatic homopolycyclic compounds

External Descriptors

alkaloid (CHEBI:80675 )
acetamides (CHEBI:80675 )
carbotricyclic compound (CHEBI:80675 )
Isoquinoline alkaloids (C16710 )

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.64	ChemAxon
pKa (Strongest Acidic)	17.95	ChemAxon
pKa (Strongest Basic)	-0.93	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	74.3 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	111.78 m³·mol⁻¹	ChemAxon
Polarizability	42.01 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00051837

Chemspider ID

24981

KEGG Compound ID

C16710

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

26819

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Nett RS, Lau W, Sattely ES: Discovery and engineering of colchicine alkaloid biosynthesis. Nature. 2020 Aug;584(7819):148-153. doi: 10.1038/s41586-020-2546-8. Epub 2020 Jul 22. [PubMed:32699417 ]
LOTUS database [Link]

Showing NP-Card for n-formyldemecolcine (NP0305313)

MOL for NP0305313 (n-formyldemecolcine)

3D MOL for NP0305313 (n-formyldemecolcine)

3D SDF for NP0305313 (n-formyldemecolcine)

3D-SDF for NP0305313 (n-formyldemecolcine)

PDB for NP0305313 (n-formyldemecolcine)

3D PDB for NP0305313 (n-formyldemecolcine)

SMILES for NP0305313 (n-formyldemecolcine)

INCHI for NP0305313 (n-formyldemecolcine)

Structure for NP0305313 (n-formyldemecolcine)

3D Structure for NP0305313 (n-formyldemecolcine)