NP-MRD: Showing NP-Card for (3s,6s,9r,12r,15r,18s)-8,14,17-trihydroxy-6,15,18-triisopropyl-4-methyl-3,9,12-tris(2-methylpropyl)-1,10-dioxa-4,7,13,16-tetraazacyclooctadeca-7,13,16-triene-2,5,11-trione (NP0304414)

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Record Information

Version

2.0

Created at

2022-09-10 19:29:04 UTC

Updated at

2022-09-10 19:29:04 UTC

NP-MRD ID

NP0304414

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(3s,6s,9r,12r,15r,18s)-8,14,17-trihydroxy-6,15,18-triisopropyl-4-methyl-3,9,12-tris(2-methylpropyl)-1,10-dioxa-4,7,13,16-tetraazacyclooctadeca-7,13,16-triene-2,5,11-trione

Description

(3S,6S,9R,12R,15R,18S)-8,14,17-trihydroxy-4-methyl-3,9,12-tris(2-methylpropyl)-6,15,18-tris(propan-2-yl)-1,10-dioxa-4,7,13,16-tetraazacyclooctadeca-7,13,16-triene-2,5,11-trione belongs to the class of organic compounds known as cyclic depsipeptides. These are natural or synthetic compounds having sequences of amino and hydroxy carboxylic acid residues (usually α-amino and α-hydroxy acids) connected in a ring. The residues are commonly but not necessarily regularly alternating. (3s,6s,9r,12r,15r,18s)-8,14,17-trihydroxy-6,15,18-triisopropyl-4-methyl-3,9,12-tris(2-methylpropyl)-1,10-dioxa-4,7,13,16-tetraazacyclooctadeca-7,13,16-triene-2,5,11-trione is found in Pseudopithomyces chartarum. Based on a literature review very few articles have been published on (3S,6S,9R,12R,15R,18S)-8,14,17-trihydroxy-4-methyl-3,9,12-tris(2-methylpropyl)-6,15,18-tris(propan-2-yl)-1,10-dioxa-4,7,13,16-tetraazacyclooctadeca-7,13,16-triene-2,5,11-trione.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309102221292D          

 46 46  0  0  1  0            999 V2000
    3.3000   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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  9 13  1  0  0  0  0
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 43 44  2  0  0  0  0
 43 45  1  0  0  0  0
  5 45  1  0  0  0  0
 45 46  1  0  0  0  0
M  END

     RDKit          3D

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  9  8  1  0
  8  6  1  0
  6  7  2  0
  6  5  1  0
  5  4  1  0
  4  2  1  0
  2  1  1  0
  2  3  1  0
  5 45  1  0
 45 46  1  0
 45 43  1  0
 43 44  2  0
 43 39  1  0
 39 38  1  0
 38 36  2  0
 36 37  1  0
 39 40  1  0
 40 41  1  0
 40 42  1  0
  9 10  1  0
 10 11  1  0
 10 12  1  0
 16 17  1  0
 17 18  1  0
 17 19  1  0
 36 31  1  0
 34 89  1  0
 34 90  1  0
 34 91  1  0
 33 88  1  0
 35 92  1  0
 35 93  1  0
 35 94  1  0
 32 86  1  0
 32 87  1  0
 31 85  1  6
 23 75  1  6
 24 76  1  0
 24 77  1  0
 25 78  1  0
 26 79  1  0
 26 80  1  0
 26 81  1  0
 27 82  1  0
 27 83  1  0
 27 84  1  0
 21 74  1  0
 16 66  1  6
 14 65  1  0
  9 57  1  1
  5 56  1  1
  4 54  1  0
  4 55  1  0
  2 50  1  0
  1 47  1  0
  1 48  1  0
  1 49  1  0
  3 51  1  0
  3 52  1  0
  3 53  1  0
 46104  1  0
 46105  1  0
 46106  1  0
 39 96  1  1
 37 95  1  0
 40 97  1  0
 41 98  1  0
 41 99  1  0
 41100  1  0
 42101  1  0
 42102  1  0
 42103  1  0
 10 58  1  0
 11 59  1  0
 11 60  1  0
 11 61  1  0
 12 62  1  0
 12 63  1  0
 12 64  1  0
 17 67  1  0
 18 68  1  0
 18 69  1  0
 18 70  1  0
 19 71  1  0
 19 72  1  0
 19 73  1  0
M  END


  Mrv1652309102221292D          

 46 46  0  0  1  0            999 V2000
    3.3000   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7125   -0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5375   -0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3000   -1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4750   -1.4289    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.0625   -0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4750   -0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2375   -0.7145    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8250   -0.0000    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.2375    0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8250    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0625    0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4125    0.7145    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4125   -0.7145    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2375   -0.7145    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.6500   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4750   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2375    0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6500   -1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4750   -1.4289    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2375   -2.1434    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6500   -2.8579    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.4750   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8875   -3.5724    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4750   -4.2868    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7125   -3.5724    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2375   -3.5724    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6500   -4.2868    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4125   -3.5724    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -4.2868    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.4125   -5.0013    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0000   -5.7158    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8250   -5.7158    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4125   -6.4302    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8250   -4.2868    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2375   -5.0013    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2375   -3.5724    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.0625   -3.5724    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.4750   -4.2868    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3000   -4.2868    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0625   -5.0013    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4750   -2.8579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3000   -2.8579    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0625   -2.1434    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.2375   -2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  2  4  1  0  0  0  0
  5  4  1  6  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  6  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  6  0  0  0
 10 11  1  0  0  0  0
 10 12  1  0  0  0  0
  9 13  1  0  0  0  0
 13 14  1  4  0  0  0
 13 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  1  0  0  0
 17 18  1  0  0  0  0
 17 19  1  0  0  0  0
 16 20  1  0  0  0  0
 20 21  1  4  0  0  0
 20 22  2  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  1  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 25 27  1  0  0  0  0
 23 28  1  0  0  0  0
 28 29  2  0  0  0  0
 28 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  1  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 33 35  1  0  0  0  0
 31 36  1  0  0  0  0
 36 37  1  4  0  0  0
 36 38  2  0  0  0  0
 38 39  1  0  0  0  0
 39 40  1  6  0  0  0
 40 41  1  0  0  0  0
 40 42  1  0  0  0  0
 39 43  1  0  0  0  0
 43 44  2  0  0  0  0
 43 45  1  0  0  0  0
  5 45  1  0  0  0  0
 45 46  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0304414

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(C)C[C@H]1OC(=O)[C@@H](CC(C)C)N=C(O)[C@H](N=C(O)[C@@H](OC(=O)[C@H](CC(C)C)N(C)C(=O)[C@@H](N=C1O)C(C)C)C(C)C)C(C)C

> <INCHI_IDENTIFIER>
InChI=1S/C34H60N4O8/c1-17(2)14-23-33(43)45-25(16-19(5)6)29(39)37-27(21(9)10)32(42)38(13)24(15-18(3)4)34(44)46-28(22(11)12)31(41)36-26(20(7)8)30(40)35-23/h17-28H,14-16H2,1-13H3,(H,35,40)(H,36,41)(H,37,39)/t23-,24+,25-,26-,27+,28+/m1/s1

> <INCHI_KEY>
IJWAUKTXQSBJRZ-HCKQMYSWSA-N

> <FORMULA>
C34H60N4O8

> <MOLECULAR_WEIGHT>
652.874

> <EXACT_MASS>
652.441114908

> <JCHEM_ACCEPTOR_COUNT>
9

> <JCHEM_ATOM_COUNT>
106

> <JCHEM_AVERAGE_POLARIZABILITY>
72.26413030267295

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(3S,6S,9R,12R,15R,18S)-8,14,17-trihydroxy-4-methyl-3,9,12-tris(2-methylpropyl)-6,15,18-tris(propan-2-yl)-1,10-dioxa-4,7,13,16-tetraazacyclooctadeca-7,13,16-triene-2,5,11-trione

> <JCHEM_LOGP>
5.972987407832513

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
2.2831521372734933

> <JCHEM_PKA_STRONGEST_ACIDIC>
-0.16427773434260473

> <JCHEM_PKA_STRONGEST_BASIC>
4.237711184179074

> <JCHEM_POLAR_SURFACE_AREA>
170.68

> <JCHEM_REFRACTIVITY>
174.35420000000005

> <JCHEM_ROTATABLE_BOND_COUNT>
9

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
(3S,6S,9R,12R,15R,18S)-8,14,17-trihydroxy-6,15,18-triisopropyl-4-methyl-3,9,12-tris(2-methylpropyl)-1,10-dioxa-4,7,13,16-tetraazacyclooctadeca-7,13,16-triene-2,5,11-trione

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 10-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   10-SEP-22         0                                  
HETATM    1  C   UNK     0       6.160  -0.000   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       6.930  -1.334   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       8.470  -1.334   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       6.160  -2.667   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       4.620  -2.667   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       3.850  -1.334   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0       4.620  -0.000   0.000  0.00  0.00           O+0
HETATM    8  O   UNK     0       2.310  -1.334   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0       1.540  -0.000   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       2.310   1.334   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       1.540   2.667   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       3.850   1.334   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       0.000   0.000   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0      -0.770   1.334   0.000  0.00  0.00           O+0
HETATM   15  N   UNK     0      -0.770  -1.334   0.000  0.00  0.00           N+0
HETATM   16  C   UNK     0      -2.310  -1.334   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      -3.080  -0.000   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      -4.620  -0.000   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -2.310   1.334   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -3.080  -2.667   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0      -4.620  -2.667   0.000  0.00  0.00           O+0
HETATM   22  N   UNK     0      -2.310  -4.001   0.000  0.00  0.00           N+0
HETATM   23  C   UNK     0      -3.080  -5.335   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      -4.620  -5.335   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      -5.390  -6.668   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      -4.620  -8.002   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      -6.930  -6.668   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      -2.310  -6.668   0.000  0.00  0.00           C+0
HETATM   29  O   UNK     0      -3.080  -8.002   0.000  0.00  0.00           O+0
HETATM   30  O   UNK     0      -0.770  -6.668   0.000  0.00  0.00           O+0
HETATM   31  C   UNK     0       0.000  -8.002   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0      -0.770  -9.336   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      -0.000 -10.669   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0       1.540 -10.669   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0      -0.770 -12.003   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0       1.540  -8.002   0.000  0.00  0.00           C+0
HETATM   37  O   UNK     0       2.310  -9.336   0.000  0.00  0.00           O+0
HETATM   38  N   UNK     0       2.310  -6.668   0.000  0.00  0.00           N+0
HETATM   39  C   UNK     0       3.850  -6.668   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0       4.620  -8.002   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0       6.160  -8.002   0.000  0.00  0.00           C+0
HETATM   42  C   UNK     0       3.850  -9.336   0.000  0.00  0.00           C+0
HETATM   43  C   UNK     0       4.620  -5.335   0.000  0.00  0.00           C+0
HETATM   44  O   UNK     0       6.160  -5.335   0.000  0.00  0.00           O+0
HETATM   45  N   UNK     0       3.850  -4.001   0.000  0.00  0.00           N+0
HETATM   46  C   UNK     0       2.310  -4.001   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3    4                                                  
CONECT    3    2                                                            
CONECT    4    2    5                                                       
CONECT    5    4    6   45                                                  
CONECT    6    5    7    8                                                  
CONECT    7    6                                                            
CONECT    8    6    9                                                       
CONECT    9    8   10   13                                                  
CONECT   10    9   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10                                                            
CONECT   13    9   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13   16                                                       
CONECT   16   15   17   20                                                  
CONECT   17   16   18   19                                                  
CONECT   18   17                                                            
CONECT   19   17                                                            
CONECT   20   16   21   22                                                  
CONECT   21   20                                                            
CONECT   22   20   23                                                       
CONECT   23   22   24   28                                                  
CONECT   24   23   25                                                       
CONECT   25   24   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25                                                            
CONECT   28   23   29   30                                                  
CONECT   29   28                                                            
CONECT   30   28   31                                                       
CONECT   31   30   32   36                                                  
CONECT   32   31   33                                                       
CONECT   33   32   34   35                                                  
CONECT   34   33                                                            
CONECT   35   33                                                            
CONECT   36   31   37   38                                                  
CONECT   37   36                                                            
CONECT   38   36   39                                                       
CONECT   39   38   40   43                                                  
CONECT   40   39   41   42                                                  
CONECT   41   40                                                            
CONECT   42   40                                                            
CONECT   43   39   44   45                                                  
CONECT   44   43                                                            
CONECT   45   43    5   46                                                  
CONECT   46   45                                                            
MASTER        0    0    0    0    0    0    0    0   46    0   92    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₄H₆₀N₄O₈

Average Mass

652.8740 Da

Monoisotopic Mass

652.44111 Da

IUPAC Name

(3S,6S,9R,12R,15R,18S)-8,14,17-trihydroxy-4-methyl-3,9,12-tris(2-methylpropyl)-6,15,18-tris(propan-2-yl)-1,10-dioxa-4,7,13,16-tetraazacyclooctadeca-7,13,16-triene-2,5,11-trione

Traditional Name

(3S,6S,9R,12R,15R,18S)-8,14,17-trihydroxy-6,15,18-triisopropyl-4-methyl-3,9,12-tris(2-methylpropyl)-1,10-dioxa-4,7,13,16-tetraazacyclooctadeca-7,13,16-triene-2,5,11-trione

CAS Registry Number

Not Available

SMILES

CC(C)C[C@H]1OC(=O)[C@@H](CC(C)C)N=C(O)[C@H](N=C(O)[C@@H](OC(=O)[C@H](CC(C)C)N(C)C(=O)[C@@H](N=C1O)C(C)C)C(C)C)C(C)C

InChI Identifier

InChI=1S/C34H60N4O8/c1-17(2)14-23-33(43)45-25(16-19(5)6)29(39)37-27(21(9)10)32(42)38(13)24(15-18(3)4)34(44)46-28(22(11)12)31(41)36-26(20(7)8)30(40)35-23/h17-28H,14-16H2,1-13H3,(H,35,40)(H,36,41)(H,37,39)/t23-,24+,25-,26-,27+,28+/m1/s1

InChI Key

IJWAUKTXQSBJRZ-HCKQMYSWSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Pseudopithomyces chartarum	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as cyclic depsipeptides. These are natural or synthetic compounds having sequences of amino and hydroxy carboxylic acid residues (usually α-amino and α-hydroxy acids) connected in a ring. The residues are commonly but not necessarily regularly alternating.

Kingdom

Organic compounds

Super Class

Organic acids and derivatives

Class

Peptidomimetics

Sub Class

Depsipeptides

Direct Parent

Cyclic depsipeptides

Alternative Parents

Substituents

Cyclic depsipeptide
Macrolide lactam
Alpha-amino acid ester
Macrolactam
Macrolide
Alpha-amino acid or derivatives
Dicarboxylic acid or derivatives
Cyclic carboximidic acid
Tertiary carboxylic acid amide
Carboxamide group
Carboxylic acid ester
Lactam
Lactone
Carboxylic acid derivative
Oxacycle
Azacycle
Organoheterocyclic compound
Organic 1,3-dipolar compound
Propargyl-type 1,3-dipolar organic compound
Polyol
Organic nitrogen compound
Hydrocarbon derivative
Organic oxygen compound
Carbonyl group
Organopnictogen compound
Organic oxide
Organonitrogen compound
Organooxygen compound
Aliphatic heteromonocyclic compound

Molecular Framework

Aliphatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	5.97	ChemAxon
pKa (Strongest Acidic)	-0.16	ChemAxon
pKa (Strongest Basic)	4.24	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	9	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	170.68 Å²	ChemAxon
Rotatable Bond Count	9	ChemAxon
Refractivity	174.35 m³·mol⁻¹	ChemAxon
Polarizability	72.26 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

162924393

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (3s,6s,9r,12r,15r,18s)-8,14,17-trihydroxy-6,15,18-triisopropyl-4-methyl-3,9,12-tris(2-methylpropyl)-1,10-dioxa-4,7,13,16-tetraazacyclooctadeca-7,13,16-triene-2,5,11-trione (NP0304414)

MOL for NP0304414 ((3s,6s,9r,12r,15r,18s)-8,14,17-trihydroxy-6,15,18-triisopropyl-4-methyl-3,9,12-tris(2-methylpropyl)-1,10-dioxa-4,7,13,16-tetraazacyclooctadeca-7,13,16-triene-2,5,11-trione)

3D MOL for NP0304414 ((3s,6s,9r,12r,15r,18s)-8,14,17-trihydroxy-6,15,18-triisopropyl-4-methyl-3,9,12-tris(2-methylpropyl)-1,10-dioxa-4,7,13,16-tetraazacyclooctadeca-7,13,16-triene-2,5,11-trione)

3D SDF for NP0304414 ((3s,6s,9r,12r,15r,18s)-8,14,17-trihydroxy-6,15,18-triisopropyl-4-methyl-3,9,12-tris(2-methylpropyl)-1,10-dioxa-4,7,13,16-tetraazacyclooctadeca-7,13,16-triene-2,5,11-trione)

3D-SDF for NP0304414 ((3s,6s,9r,12r,15r,18s)-8,14,17-trihydroxy-6,15,18-triisopropyl-4-methyl-3,9,12-tris(2-methylpropyl)-1,10-dioxa-4,7,13,16-tetraazacyclooctadeca-7,13,16-triene-2,5,11-trione)

PDB for NP0304414 ((3s,6s,9r,12r,15r,18s)-8,14,17-trihydroxy-6,15,18-triisopropyl-4-methyl-3,9,12-tris(2-methylpropyl)-1,10-dioxa-4,7,13,16-tetraazacyclooctadeca-7,13,16-triene-2,5,11-trione)

3D PDB for NP0304414 ((3s,6s,9r,12r,15r,18s)-8,14,17-trihydroxy-6,15,18-triisopropyl-4-methyl-3,9,12-tris(2-methylpropyl)-1,10-dioxa-4,7,13,16-tetraazacyclooctadeca-7,13,16-triene-2,5,11-trione)

SMILES for NP0304414 ((3s,6s,9r,12r,15r,18s)-8,14,17-trihydroxy-6,15,18-triisopropyl-4-methyl-3,9,12-tris(2-methylpropyl)-1,10-dioxa-4,7,13,16-tetraazacyclooctadeca-7,13,16-triene-2,5,11-trione)

INCHI for NP0304414 ((3s,6s,9r,12r,15r,18s)-8,14,17-trihydroxy-6,15,18-triisopropyl-4-methyl-3,9,12-tris(2-methylpropyl)-1,10-dioxa-4,7,13,16-tetraazacyclooctadeca-7,13,16-triene-2,5,11-trione)

Structure for NP0304414 ((3s,6s,9r,12r,15r,18s)-8,14,17-trihydroxy-6,15,18-triisopropyl-4-methyl-3,9,12-tris(2-methylpropyl)-1,10-dioxa-4,7,13,16-tetraazacyclooctadeca-7,13,16-triene-2,5,11-trione)

3D Structure for NP0304414 ((3s,6s,9r,12r,15r,18s)-8,14,17-trihydroxy-6,15,18-triisopropyl-4-methyl-3,9,12-tris(2-methylpropyl)-1,10-dioxa-4,7,13,16-tetraazacyclooctadeca-7,13,16-triene-2,5,11-trione)