Np mrd loader

Record Information
Version2.0
Created at2022-09-10 19:24:32 UTC
Updated at2022-09-10 19:24:32 UTC
NP-MRD IDNP0304367
Secondary Accession NumbersNone
Natural Product Identification
Common Name1-isopropyl-4,7-dimethyl-2,3,4,5,6,8a-hexahydro-1h-naphthalen-4a-ol
DescriptionEpicubenol belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units. Epicubenol is an extremely weak basic (essentially neutral) compound (based on its pKa). Outside of the human body, Epicubenol has been detected, but not quantified in, herbs and spices. 1-isopropyl-4,7-dimethyl-2,3,4,5,6,8a-hexahydro-1h-naphthalen-4a-ol is found in Bazzania japonica, Chamaecyparis obtusa, Clinopodium chilense, Cryptomeria japonica, Daucus carota, Dictyopteris delicatula, Dictyopteris divaricata, Entandrophragma cylindricum, Eugenia dysenterica, Fitzroya cupressoides, Lippia americana, Ocotea longifolia, Picea koraiensis, Piper auritum, Psidium salutare, Scapania undulata, Solidago canadensis, Streptomyces griseus and Toona ciliata. 1-isopropyl-4,7-dimethyl-2,3,4,5,6,8a-hexahydro-1h-naphthalen-4a-ol was first documented in 2000 (PMID: 10673090). This could make epicubenol a potential biomarker for the consumption of these foods (PMID: 16202980) (PMID: 12943786) (PMID: 18649320).
Structure
Thumb
Synonyms
ValueSource
Epi-cubenolHMDB
CubenolMeSH
EpicubenolMeSH
Chemical FormulaC15H26O
Average Mass222.3663 Da
Monoisotopic Mass222.19837 Da
IUPAC Name4,7-dimethyl-1-(propan-2-yl)-1,2,3,4,4a,5,6,8a-octahydronaphthalen-4a-ol
Traditional Name1-isopropyl-4,7-dimethyl-2,3,4,5,6,8a-hexahydro-1H-naphthalen-4a-ol
CAS Registry NumberNot Available
SMILES
CC(C)C1CCC(C)C2(O)CCC(C)=CC12
InChI Identifier
InChI=1S/C15H26O/c1-10(2)13-6-5-12(4)15(16)8-7-11(3)9-14(13)15/h9-10,12-14,16H,5-8H2,1-4H3
InChI KeyCOGPRPSWSKLKTF-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Bazzania japonicaLOTUS Database
Chamaecyparis obtusaLOTUS Database
Clinopodium chilenseLOTUS Database
Cryptomeria japonicaLOTUS Database
Daucus carotaLOTUS Database
Dictyopteris delicatulaLOTUS Database
Dictyopteris divaricataLOTUS Database
Entandrophragma cylindricumLOTUS Database
Eugenia dysentericaLOTUS Database
Fitzroya cupressoidesLOTUS Database
Lippia americanaLOTUS Database
Ocotea longifoliaLOTUS Database
Picea koraiensisLOTUS Database
Piper auritumLOTUS Database
Psidium salutareLOTUS Database
Scapania undulataLOTUS Database
Solidago canadensisLOTUS Database
Streptomyces griseusLOTUS Database
Toona ciliataLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassSesquiterpenoids
Direct ParentSesquiterpenoids
Alternative Parents
Substituents
  • Sesquiterpenoid
  • Cadinane sesquiterpenoid
  • Tertiary alcohol
  • Cyclic alcohol
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Alcohol
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP3.76ALOGPS
logP3.69ChemAxon
logS-3.5ALOGPS
pKa (Strongest Basic)-0.21ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area20.23 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity69.28 m³·mol⁻¹ChemAxon
Polarizability27.83 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
HMDB IDHMDB0037031
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDFDB016012
KNApSAcK IDC00033734
Chemspider ID453462
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound519857
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Cane DE, Ke N: Epicubenol synthase. Origin of the oxygen atom of a bacterial sesquiterpene alcohol. Bioorg Med Chem Lett. 2000 Jan 17;10(2):105-7. doi: 10.1016/s0960-894x(99)00650-2. [PubMed:10673090 ]
  2. Takei M, Umeyama A, Arihara S: Epicubenol and Ferruginol induce DC from human monocytes and differentiate IL-10-producing regulatory T cells in vitro. Biochem Biophys Res Commun. 2005 Nov 18;337(2):730-8. doi: 10.1016/j.bbrc.2005.09.110. Epub 2005 Sep 26. [PubMed:16202980 ]
  3. Catalan CA, de Heluani CS, Kotowicz C, Gedris TE, Herz W: A linear sesterterpene, two squalene derivatives and two peptide derivatives from Croton hieronymi. Phytochemistry. 2003 Sep;64(2):625-9. doi: 10.1016/s0031-9422(03)00202-4. [PubMed:12943786 ]
  4. Cole RA, Haber WA, Lawton RO, Setzer WN: Leaf essential oil composition of three species of Myrcianthes from Monteverde, Costa Rica. Chem Biodivers. 2008 Jul;5(7):1327-34. doi: 10.1002/cbdv.200890120. [PubMed:18649320 ]
  5. LOTUS database [Link]