NP-MRD: Showing NP-Card for (2s)-n-[(3s,4s,7s,10z)-7-[(2r)-butan-2-yl]-5,8-dihydroxy-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(dimethylamino)-4-methylpentanimidic acid (NP0298762)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

2.0

Created at

2022-09-10 10:12:52 UTC

Updated at

2022-09-10 10:12:52 UTC

NP-MRD ID

NP0298762

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(2s)-n-[(3s,4s,7s,10z)-7-[(2r)-butan-2-yl]-5,8-dihydroxy-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(dimethylamino)-4-methylpentanimidic acid

Description

(2S)-N-[(3S,4S,7S,10Z)-7-[(2R)-butan-2-yl]-5,8-dihydroxy-3-(propan-2-yl)-2-oxa-6,9-diazabicyclo[10.2.2]Hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(dimethylamino)-4-methylpentanimidic acid belongs to the class of organic compounds known as cyclic peptides. Cyclic peptides are compounds containing a cyclic moiety bearing a peptide backbone. (2s)-n-[(3s,4s,7s,10z)-7-[(2r)-butan-2-yl]-5,8-dihydroxy-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(dimethylamino)-4-methylpentanimidic acid is found in Ceanothus americanus. Based on a literature review very few articles have been published on (2S)-N-[(3S,4S,7S,10Z)-7-[(2R)-butan-2-yl]-5,8-dihydroxy-3-(propan-2-yl)-2-oxa-6,9-diazabicyclo[10.2.2]Hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(dimethylamino)-4-methylpentanimidic acid.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309102212122D          

 36 37  0  0  1  0            999 V2000
    2.0566    5.8503    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2537    6.0400    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0165    6.8301    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.5822    7.4306    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2136    7.0198    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.1570    6.2737    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8110    5.7591    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4562    5.0143    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6240    5.5751    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.6240    4.7501    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9095    4.3376    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1951    4.7501    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9095    3.5126    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.6240    3.1001    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6240    2.2751    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3385    1.8626    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9095    1.8626    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1951    3.1001    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.5194    3.5126    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1951    2.2751    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4441    5.7607    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.7892    5.0114    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6107    4.9356    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3128    4.3379    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1233    6.2670    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3875    7.0936    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8036    7.8289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3825    8.5429    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5457    8.6151    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1623    7.8871    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5563    7.1645    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7862    9.0326    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9295    9.0944    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1912    8.6424    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.2161    7.8757    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0170    8.0740    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  6  0  0  0
  5  3  1  6  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  7  8  1  4  0  0  0
  7  9  1  0  0  0  0
  9 10  1  1  0  0  0
 10 11  2  0  0  0  0
 11 12  1  4  0  0  0
 11 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 15 17  1  0  0  0  0
 13 18  1  1  0  0  0
 18 19  1  0  0  0  0
 18 20  1  0  0  0  0
  9 21  1  0  0  0  0
 21 22  1  6  0  0  0
 22 23  1  0  0  0  0
 22 24  1  0  0  0  0
 21 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  2  0  0  0  0
 27 28  1  0  0  0  0
 28 29  2  0  0  0  0
 29 30  1  0  0  0  0
 30 31  2  0  0  0  0
 26 31  1  0  0  0  0
 29 32  1  0  0  0  0
 32 33  2  0  0  0  0
 34 33  1  4  0  0  0
 34 35  2  0  0  0  0
  5 35  1  0  0  0  0
 35 36  1  0  0  0  0
M  END

     RDKit          3D

 80 81  0  0  0  0  0  0  0  0999 V2000
   -4.2722   -3.6293   -0.9402 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7939   -3.5079   -0.8110 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2825   -2.6717    0.2870 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.7067   -2.7637    0.2343 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5632   -1.1846    0.2324 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.9731   -0.6058    1.3475 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1810    0.1034    1.9183 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6477    0.6019    3.1824 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1823    0.6093    1.6552 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7177    0.3237    0.3694 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.9600    0.2120    0.0531 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8892    0.3839    1.0570 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4105   -0.0830   -1.3043 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.7306   -1.4828   -1.6323 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7615   -2.2176   -0.8769 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5253   -2.4136    0.5845 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1843   -1.7048   -1.0833 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4363    0.8549   -1.7707 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.9047    2.2191   -1.7649 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6701    0.6057   -3.2164 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4465    2.0516    1.9668 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.5813    2.4007    3.4153 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8423    3.9211    3.4361 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8470    1.8056    4.0219 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3750    2.9683    1.2439 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4593    2.5752    0.3778 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7176    2.5474    0.8372 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8323    2.1605    0.0401 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6835    1.7898   -1.2606 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3725    1.8218   -1.7428 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2774    2.2100   -0.9331 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8475    1.3196   -2.0719 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1327   -0.0330   -2.0321 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7095   -0.6789   -0.8952 N   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0214   -0.9247    0.0541 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6527   -1.0025    1.3417 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6568   -3.1773   -1.8941 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8013   -3.2772   -0.0448 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5843   -4.7193   -1.0306 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3609   -3.2241   -1.8106 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4065   -4.5631   -0.6254 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5317   -3.1063    1.2632 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4773   -3.8138   -0.0280 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3476   -2.0889   -0.5394 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3069   -2.5493    1.2398 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0216   -0.8319   -0.6945 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3340    0.0678    3.9848 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7989    0.0260    2.3814 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7555   -0.0066    1.9540 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5198    0.1856   -1.9727 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7880   -2.0882   -1.5851 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0272   -1.5360   -2.7192 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8018   -3.2534   -1.3492 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6946   -3.5192    0.8060 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4745   -2.2630    0.8810 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2728   -1.9108    1.2341 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.8596   -2.1206   -0.3086 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5401   -2.0340   -2.0585 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2168   -0.5957   -0.9536 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9195    2.6148   -0.7532 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5901    2.8238   -2.3934 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9275    2.2437   -2.2808 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4441   -0.1614   -3.3243 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7018    0.3644   -3.6782 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0711    1.5350   -3.6846 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4540    2.2732    1.5348 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2907    2.2655    4.0397 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8146    4.3226    4.4528 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1910    4.4404    2.7252 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8850    4.0383    3.0674 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7166    1.9434    3.3487 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1293    2.3738    4.9576 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6772    0.7761    4.3478 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0521    2.8467    1.9195 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7860    2.2285    0.7166 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9262    1.5755   -2.7307 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3366    2.1769   -1.5233 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5722    1.8273   -2.7472 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6421   -0.4172   -2.8937 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4245   -0.2743    1.9874 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  3  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  7  9  1  0
  9 10  1  0
 10 11  2  0
 11 12  1  0
 11 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 15 17  1  0
 13 18  1  0
 18 19  1  0
 18 20  1  0
  9 21  1  0
 21 25  1  0
 25 26  1  0
 26 27  2  0
 27 28  1  0
 28 29  2  0
 29 30  1  0
 30 31  2  0
 29 32  1  0
 32 33  2  0
 33 34  1  0
 34 35  2  0
 35 36  1  0
 21 22  1  0
 22 23  1  0
 22 24  1  0
 35  5  1  0
 31 26  1  0
  1 37  1  0
  1 38  1  0
  1 39  1  0
  2 40  1  0
  2 41  1  0
  3 42  1  1
  4 43  1  0
  4 44  1  0
  4 45  1  0
  5 46  1  6
  8 47  1  0
  9 48  1  1
 12 49  1  0
 13 50  1  6
 14 51  1  0
 14 52  1  0
 15 53  1  0
 16 54  1  0
 16 55  1  0
 16 56  1  0
 17 57  1  0
 17 58  1  0
 17 59  1  0
 19 60  1  0
 19 61  1  0
 19 62  1  0
 20 63  1  0
 20 64  1  0
 20 65  1  0
 21 66  1  6
 27 74  1  0
 28 75  1  0
 30 76  1  0
 31 77  1  0
 32 78  1  0
 33 79  1  0
 36 80  1  0
 22 67  1  0
 23 68  1  0
 23 69  1  0
 23 70  1  0
 24 71  1  0
 24 72  1  0
 24 73  1  0
M  END


  Mrv1652309102212122D          

 36 37  0  0  1  0            999 V2000
    2.0566    5.8503    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2537    6.0400    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0165    6.8301    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.5822    7.4306    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2136    7.0198    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.1570    6.2737    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8110    5.7591    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4562    5.0143    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6240    5.5751    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.6240    4.7501    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9095    4.3376    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1951    4.7501    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9095    3.5126    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.6240    3.1001    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6240    2.2751    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3385    1.8626    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9095    1.8626    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1951    3.1001    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.5194    3.5126    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1951    2.2751    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4441    5.7607    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.7892    5.0114    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6107    4.9356    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3128    4.3379    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1233    6.2670    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3875    7.0936    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8036    7.8289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3825    8.5429    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5457    8.6151    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1623    7.8871    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5563    7.1645    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7862    9.0326    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9295    9.0944    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1912    8.6424    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.2161    7.8757    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0170    8.0740    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  6  0  0  0
  5  3  1  6  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  7  8  1  4  0  0  0
  7  9  1  0  0  0  0
  9 10  1  1  0  0  0
 10 11  2  0  0  0  0
 11 12  1  4  0  0  0
 11 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 15 17  1  0  0  0  0
 13 18  1  1  0  0  0
 18 19  1  0  0  0  0
 18 20  1  0  0  0  0
  9 21  1  0  0  0  0
 21 22  1  6  0  0  0
 22 23  1  0  0  0  0
 22 24  1  0  0  0  0
 21 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  2  0  0  0  0
 27 28  1  0  0  0  0
 28 29  2  0  0  0  0
 29 30  1  0  0  0  0
 30 31  2  0  0  0  0
 26 31  1  0  0  0  0
 29 32  1  0  0  0  0
 32 33  2  0  0  0  0
 34 33  1  4  0  0  0
 34 35  2  0  0  0  0
  5 35  1  0  0  0  0
 35 36  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0298762

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC[C@@H](C)[C@@H]1N=C(O)[C@@H](N=C(O)[C@H](CC(C)C)N(C)C)[C@@H](OC2=CC=C(C=C2)\C=C/N=C1O)C(C)C

> <INCHI_IDENTIFIER>
InChI=1S/C28H44N4O4/c1-9-19(6)23-27(34)29-15-14-20-10-12-21(13-11-20)36-25(18(4)5)24(28(35)30-23)31-26(33)22(32(7)8)16-17(2)3/h10-15,17-19,22-25H,9,16H2,1-8H3,(H,29,34)(H,30,35)(H,31,33)/b15-14-/t19-,22+,23+,24+,25+/m1/s1

> <INCHI_KEY>
OMVRKRVDDRUXPW-VKKXVIDFSA-N

> <FORMULA>
C28H44N4O4

> <MOLECULAR_WEIGHT>
500.684

> <EXACT_MASS>
500.336255913

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
80

> <JCHEM_AVERAGE_POLARIZABILITY>
55.60800822024038

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2S)-N-[(3S,4S,7S,10Z)-7-[(2R)-butan-2-yl]-5,8-dihydroxy-3-(propan-2-yl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(dimethylamino)-4-methylpentanimidic acid

> <JCHEM_LOGP>
-1.6064144346067382

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA>
-4.315094292178862

> <JCHEM_PKA_STRONGEST_ACIDIC>
-9.332421924844951

> <JCHEM_PKA_STRONGEST_BASIC>
14.968864803207472

> <JCHEM_POLAR_SURFACE_AREA>
110.24000000000001

> <JCHEM_REFRACTIVITY>
143.33630000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
8

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
(2S)-N-[(3S,4S,7S,10Z)-7-[(2R)-butan-2-yl]-5,8-dihydroxy-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(dimethylamino)-4-methylpentanimidic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 10-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   10-SEP-22         0                                  
HETATM    1  C   UNK     0       3.839  10.921   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       2.340  11.275   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       1.897  12.750   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       2.953  13.871   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       0.399  13.104   0.000  0.00  0.00           C+0
HETATM    6  N   UNK     0      -0.293  11.711   0.000  0.00  0.00           N+0
HETATM    7  C   UNK     0      -1.514  10.750   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0      -0.852   9.360   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0      -3.031  10.407   0.000  0.00  0.00           C+0
HETATM   10  N   UNK     0      -3.031   8.867   0.000  0.00  0.00           N+0
HETATM   11  C   UNK     0      -1.698   8.097   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0      -0.364   8.867   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0      -1.698   6.557   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      -3.031   5.787   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      -3.031   4.247   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      -4.365   3.477   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      -1.698   3.477   0.000  0.00  0.00           C+0
HETATM   18  N   UNK     0      -0.364   5.787   0.000  0.00  0.00           N+0
HETATM   19  C   UNK     0       0.970   6.557   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -0.364   4.247   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      -4.562  10.753   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -5.207   9.355   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      -6.740   9.213   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      -4.317   8.097   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0      -5.830  11.698   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0      -6.323  13.241   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      -7.100  14.614   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      -6.314  15.947   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      -4.752  16.081   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      -4.036  14.723   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      -4.772  13.374   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0      -3.334  16.861   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      -1.735  16.976   0.000  0.00  0.00           C+0
HETATM   34  N   UNK     0      -0.357  16.132   0.000  0.00  0.00           N+0
HETATM   35  C   UNK     0       0.403  14.701   0.000  0.00  0.00           C+0
HETATM   36  O   UNK     0       1.898  15.071   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6   35                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8    9                                                  
CONECT    8    7                                                            
CONECT    9    7   10   21                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12   13                                                  
CONECT   12   11                                                            
CONECT   13   11   14   18                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16   17                                                  
CONECT   16   15                                                            
CONECT   17   15                                                            
CONECT   18   13   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18                                                            
CONECT   21    9   22   25                                                  
CONECT   22   21   23   24                                                  
CONECT   23   22                                                            
CONECT   24   22                                                            
CONECT   25   21   26                                                       
CONECT   26   25   27   31                                                  
CONECT   27   26   28                                                       
CONECT   28   27   29                                                       
CONECT   29   28   30   32                                                  
CONECT   30   29   31                                                       
CONECT   31   30   26                                                       
CONECT   32   29   33                                                       
CONECT   33   32   34                                                       
CONECT   34   33   35                                                       
CONECT   35   34    5   36                                                  
CONECT   36   35                                                            
MASTER        0    0    0    0    0    0    0    0   36    0   74    0
END

View in JSmol

Synonyms

Value	Source
(2S)-N-[(3S,4S,7S,10Z)-7-[(2R)-Butan-2-yl]-5,8-dihydroxy-3-(propan-2-yl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(dimethylamino)-4-methylpentanimidate	Generator

Chemical Formula

C₂₈H₄₄N₄O₄

Average Mass

500.6840 Da

Monoisotopic Mass

500.33626 Da

IUPAC Name

(2S)-N-[(3S,4S,7S,10Z)-7-[(2R)-butan-2-yl]-5,8-dihydroxy-3-(propan-2-yl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(dimethylamino)-4-methylpentanimidic acid

Traditional Name

(2S)-N-[(3S,4S,7S,10Z)-7-[(2R)-butan-2-yl]-5,8-dihydroxy-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(dimethylamino)-4-methylpentanimidic acid

CAS Registry Number

Not Available

SMILES

CC[C@@H](C)[C@@H]1N=C(O)[C@@H](N=C(O)[C@H](CC(C)C)N(C)C)[C@@H](OC2=CC=C(C=C2)\C=C/N=C1O)C(C)C

InChI Identifier

InChI=1S/C28H44N4O4/c1-9-19(6)23-27(34)29-15-14-20-10-12-21(13-11-20)36-25(18(4)5)24(28(35)30-23)31-26(33)22(32(7)8)16-17(2)3/h10-15,17-19,22-25H,9,16H2,1-8H3,(H,29,34)(H,30,35)(H,31,33)/b15-14-/t19-,22+,23+,24+,25+/m1/s1

InChI Key

OMVRKRVDDRUXPW-VKKXVIDFSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Ceanothus americanus	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as cyclic peptides. Cyclic peptides are compounds containing a cyclic moiety bearing a peptide backbone.

Kingdom

Organic compounds

Super Class

Organic acids and derivatives

Class

Carboxylic acids and derivatives

Sub Class

Amino acids, peptides, and analogues

Direct Parent

Cyclic peptides

Alternative Parents

Substituents

Cyclic alpha peptide
Alkyl aryl ether
Benzenoid
Cyclic carboximidic acid
Tertiary amine
Tertiary aliphatic amine
Carboximidic acid
Carboximidic acid derivative
Ether
Oxacycle
Propargyl-type 1,3-dipolar organic compound
Organic 1,3-dipolar compound
Azacycle
Organoheterocyclic compound
Organooxygen compound
Hydrocarbon derivative
Organopnictogen compound
Organic nitrogen compound
Amine
Organic oxygen compound
Organonitrogen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	-1.6	ChemAxon
pKa (Strongest Acidic)	-9.3	ChemAxon
pKa (Strongest Basic)	14.97	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	8	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	110.24 Å²	ChemAxon
Rotatable Bond Count	8	ChemAxon
Refractivity	143.34 m³·mol⁻¹	ChemAxon
Polarizability	55.61 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

163185572

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (2s)-n-[(3s,4s,7s,10z)-7-[(2r)-butan-2-yl]-5,8-dihydroxy-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(dimethylamino)-4-methylpentanimidic acid (NP0298762)

MOL for NP0298762 ((2s)-n-[(3s,4s,7s,10z)-7-[(2r)-butan-2-yl]-5,8-dihydroxy-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(dimethylamino)-4-methylpentanimidic acid)

3D MOL for NP0298762 ((2s)-n-[(3s,4s,7s,10z)-7-[(2r)-butan-2-yl]-5,8-dihydroxy-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(dimethylamino)-4-methylpentanimidic acid)

3D SDF for NP0298762 ((2s)-n-[(3s,4s,7s,10z)-7-[(2r)-butan-2-yl]-5,8-dihydroxy-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(dimethylamino)-4-methylpentanimidic acid)

3D-SDF for NP0298762 ((2s)-n-[(3s,4s,7s,10z)-7-[(2r)-butan-2-yl]-5,8-dihydroxy-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(dimethylamino)-4-methylpentanimidic acid)

PDB for NP0298762 ((2s)-n-[(3s,4s,7s,10z)-7-[(2r)-butan-2-yl]-5,8-dihydroxy-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(dimethylamino)-4-methylpentanimidic acid)

3D PDB for NP0298762 ((2s)-n-[(3s,4s,7s,10z)-7-[(2r)-butan-2-yl]-5,8-dihydroxy-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(dimethylamino)-4-methylpentanimidic acid)

SMILES for NP0298762 ((2s)-n-[(3s,4s,7s,10z)-7-[(2r)-butan-2-yl]-5,8-dihydroxy-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(dimethylamino)-4-methylpentanimidic acid)

INCHI for NP0298762 ((2s)-n-[(3s,4s,7s,10z)-7-[(2r)-butan-2-yl]-5,8-dihydroxy-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(dimethylamino)-4-methylpentanimidic acid)

Structure for NP0298762 ((2s)-n-[(3s,4s,7s,10z)-7-[(2r)-butan-2-yl]-5,8-dihydroxy-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(dimethylamino)-4-methylpentanimidic acid)

3D Structure for NP0298762 ((2s)-n-[(3s,4s,7s,10z)-7-[(2r)-butan-2-yl]-5,8-dihydroxy-3-isopropyl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(dimethylamino)-4-methylpentanimidic acid)