NP-MRD: Showing NP-Card for 1-(10,11-dihydroxy-4,6,12,17,17-pentamethyl-18-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-9-oxahexacyclo[11.9.0.0¹,²¹.0⁴,¹².0⁵,¹⁰.0¹⁶,²¹]docosan-8-yl)-2-hydroxy-2-methylpropyl acetate (NP0298731)

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Record Information

Version

2.0

Created at

2022-09-10 10:10:23 UTC

Updated at

2022-09-10 10:10:23 UTC

NP-MRD ID

NP0298731

Secondary Accession Numbers

None

Natural Product Identification

Common Name

1-(10,11-dihydroxy-4,6,12,17,17-pentamethyl-18-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-9-oxahexacyclo[11.9.0.0¹,²¹.0⁴,¹².0⁵,¹⁰.0¹⁶,²¹]docosan-8-yl)-2-hydroxy-2-methylpropyl acetate

Description

1-(10,11-Dihydroxy-4,6,12,17,17-pentamethyl-18-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-9-oxahexacyclo[11.9.0.0¹,²¹.0⁴,¹².0⁵,¹⁰.0¹⁶,²¹]Docosan-8-yl)-2-hydroxy-2-methylpropyl acetate belongs to the class of organic compounds known as cucurbitacin glycosides. These are polycyclic compounds containing a carbohydrate derivative glycosidically linked to a curcubitane nucleus. 1-(10,11-dihydroxy-4,6,12,17,17-pentamethyl-18-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-9-oxahexacyclo[11.9.0.0¹,²¹.0⁴,¹².0⁵,¹⁰.0¹⁶,²¹]docosan-8-yl)-2-hydroxy-2-methylpropyl acetate is found in Actaea simplex. 1-(10,11-Dihydroxy-4,6,12,17,17-pentamethyl-18-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-9-oxahexacyclo[11.9.0.0¹,²¹.0⁴,¹².0⁵,¹⁰.0¹⁶,²¹]Docosan-8-yl)-2-hydroxy-2-methylpropyl acetate is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004181503032D          

 50 56  0  0  0  0            999 V2000
    5.9742    3.2642    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1451    2.4571    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9295    2.2016    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1004    1.3945    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4869    0.8429    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7024    1.0984    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7881    0.2779    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9877    0.6865    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9008   -0.1339    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.3750    1.2390    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1194    0.4546    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5544    1.1534    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2183    0.4000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3978    0.3144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9133    0.9822    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0928    0.8966    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3196    0.1034    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3510    0.5355    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6084    1.5644    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9445    2.3178    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7651    2.4034    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2495    1.7356    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5856    2.4890    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0700    1.8212    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4062    2.5746    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2267    2.6602    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7111    1.9924    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1242    2.7066    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5315    1.9055    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2122    1.4788    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6966    2.1466    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5171    2.0610    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0015    2.7288    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8221    2.6432    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3065    3.3110    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6654    3.4822    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1498    4.1500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8448    3.5678    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5087    4.3213    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3604    2.9000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4601    2.9856    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8848    1.1389    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.4983    1.6905    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.2828    1.4349    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.8963    1.9865    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.4537    0.6278    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0557    0.3318    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2266   -0.4753    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8628    0.5027    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2486    0.1609    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  6  8  1  0  0  0  0
  8  9  1  0  0  0  0
  8 10  1  0  0  0  0
 10 11  1  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 16 18  1  0  0  0  0
 16 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 15 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 12 24  1  0  0  0  0
 22 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 10 27  1  0  0  0  0
 27 28  1  0  0  0  0
 27 29  1  0  0  0  0
  2 29  1  0  0  0  0
  6 29  1  0  0  0  0
 19 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 34 35  1  0  0  0  0
 33 36  1  0  0  0  0
 36 37  1  0  0  0  0
 36 38  1  0  0  0  0
 38 39  1  0  0  0  0
 38 40  1  0  0  0  0
 31 40  1  0  0  0  0
 40 41  1  0  0  0  0
  4 42  1  0  0  0  0
 42 43  1  0  0  0  0
 43 44  1  0  0  0  0
 44 45  2  0  0  0  0
 44 46  1  0  0  0  0
 42 47  1  0  0  0  0
 47 48  1  0  0  0  0
 47 49  1  0  0  0  0
 47 50  1  0  0  0  0
M  END

     RDKit          3D

112118  0  0  0  0  0  0  0  0999 V2000
   -6.8645    3.3879   -3.3954 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2544    2.2540   -2.5174 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0631    1.3880   -2.9233 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7726    2.0812   -1.2431 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1058    1.0329   -0.3737 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.9571    0.1240   -0.0553 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.5781   -0.7098   -1.2792 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5598   -1.7690   -0.8106 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.3195   -2.7812   -0.0541 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5117   -1.0131   -0.1315 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.9884   -0.1703    1.0316 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.4046   -0.8806    2.1160 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8969    0.7390    0.5422 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6582    0.4851    1.4021 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7476    0.9080    2.7056 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6518   -0.6650    1.2299 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.3496   -1.1454    2.6376 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4188   -0.0356    0.6380 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.2196    0.8006    1.7274 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5000    1.4536    1.1836 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4502    0.3432    0.9017 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.8030    0.7989    0.3863 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2866    1.9934    1.1555 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7295    1.2011   -1.0746 C   0  0  0  0  0  0  0  0  0  0  0  0
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    5.9845   -0.0128   -0.0224 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.0819   -0.3395    0.7326 C   0  0  1  0  0  0  0  0  0  0  0  0
    7.8219   -1.3738    0.1055 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.5175   -0.9221   -0.9803 C   0  0  2  0  0  0  0  0  0  0  0  0
   10.0200   -1.1693   -0.8503 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.6872   -0.6947   -1.9760 O   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.4606   -2.0934   -0.8392 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3111   -1.6985    0.3779 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.5386   -2.9556    1.1496 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8962    1.4655    0.8245 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1958    0.2361    1.6568 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.2383    1.9725    0.3151 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -0.0330   -3.0090    0.5361 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9056   -3.0256   -1.2449 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4476   -1.2573   -1.5414 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6310   -3.1548    1.7942 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3913   -2.9622    1.8225 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5378   -3.8370    0.4421 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4264    0.0704    2.4394 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.1575    0.3987    2.2062 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.3655   -0.6641    1.0280 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.0130    1.9193    1.1179 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.1668    2.9462   -0.1695 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.5649    1.2351   -0.4572 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8483    1.9397    2.4063 H   0  0  0  0  0  0  0  0  0  0  0  0
  9  8  1  0
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  6 13  1  0
 13 11  1  0
 11 12  1  1
 11 14  1  0
 14 15  1  0
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 16 17  1  1
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 18 19  1  0
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 20 21  1  0
 21 40  1  0
 40 41  1  6
 42 41  1  6
 42 43  1  0
 43 44  1  0
 44 45  1  0
 45 46  1  1
 45 10  1  0
 40 39  1  0
 39 38  1  0
 38 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  1  0
 28 29  1  0
 29 30  1  0
 30 31  1  0
 29 32  1  0
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 34 35  1  0
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 36 37  1  0
 25 22  1  0
 22 23  1  0
 22 24  1  0
  6  5  1  0
  5  4  1  0
  4  2  1  0
  2  1  1  0
  2  3  2  0
  5 47  1  0
 47 48  1  0
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 47 50  1  0
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 36 27  1  0
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 42 18  1  0
 22 21  1  0
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  9 59  1  0
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  8 58  1  6
  7 56  1  0
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  6 55  1  1
 12 63  1  0
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 17 66  1  0
 17 67  1  0
 17 68  1  0
 18 69  1  6
 19 70  1  0
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 20 72  1  0
 20 73  1  0
 21 74  1  1
 41 97  1  0
 41 98  1  0
 43 99  1  0
 43100  1  0
 44101  1  0
 44102  1  0
 46103  1  0
 46104  1  0
 46105  1  0
 10 62  1  6
 39 95  1  0
 39 96  1  0
 38 93  1  0
 38 94  1  0
 25 81  1  1
 27 82  1  1
 29 83  1  6
 30 84  1  0
 30 85  1  0
 31 86  1  0
 32 87  1  6
 33 88  1  0
 34 89  1  6
 35 90  1  0
 36 91  1  1
 37 92  1  0
 23 75  1  0
 23 76  1  0
 23 77  1  0
 24 78  1  0
 24 79  1  0
 24 80  1  0
  5 54  1  6
  1 51  1  0
  1 52  1  0
  1 53  1  0
 48106  1  0
 48107  1  0
 48108  1  0
 49109  1  0
 49110  1  0
 49111  1  0
 50112  1  0
M  END


  Mrv1533004181503032D          

 50 56  0  0  0  0            999 V2000
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    6.1451    2.4571    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9295    2.2016    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1004    1.3945    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4869    0.8429    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7024    1.0984    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7881    0.2779    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9877    0.6865    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9008   -0.1339    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.3750    1.2390    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1194    0.4546    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5544    1.1534    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2183    0.4000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3978    0.3144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9133    0.9822    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    0.3510    0.5355    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    0.9445    2.3178    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7651    2.4034    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2495    1.7356    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5856    2.4890    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0700    1.8212    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4062    2.5746    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2267    2.6602    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7111    1.9924    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1242    2.7066    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5315    1.9055    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2122    1.4788    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6966    2.1466    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5171    2.0610    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0015    2.7288    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8221    2.6432    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3065    3.3110    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6654    3.4822    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1498    4.1500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8448    3.5678    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5087    4.3213    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3604    2.9000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4601    2.9856    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8848    1.1389    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.4983    1.6905    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.2828    1.4349    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.8963    1.9865    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.4537    0.6278    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0557    0.3318    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2266   -0.4753    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8628    0.5027    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2486    0.1609    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  6  8  1  0  0  0  0
  8  9  1  0  0  0  0
  8 10  1  0  0  0  0
 10 11  1  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 16 18  1  0  0  0  0
 16 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 15 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 12 24  1  0  0  0  0
 22 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 10 27  1  0  0  0  0
 27 28  1  0  0  0  0
 27 29  1  0  0  0  0
  2 29  1  0  0  0  0
  6 29  1  0  0  0  0
 19 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 34 35  1  0  0  0  0
 33 36  1  0  0  0  0
 36 37  1  0  0  0  0
 36 38  1  0  0  0  0
 38 39  1  0  0  0  0
 38 40  1  0  0  0  0
 31 40  1  0  0  0  0
 40 41  1  0  0  0  0
  4 42  1  0  0  0  0
 42 43  1  0  0  0  0
 43 44  1  0  0  0  0
 44 45  2  0  0  0  0
 44 46  1  0  0  0  0
 42 47  1  0  0  0  0
 47 48  1  0  0  0  0
 47 49  1  0  0  0  0
 47 50  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0298731

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC1CC(OC2(O)C(O)C3(C)C4CCC5C6(CC46CCC3(C)C12)CCC(OC1OC(CO)C(O)C(O)C1O)C5(C)C)C(OC(C)=O)C(C)(C)O

> <INCHI_IDENTIFIER>
InChI=1S/C38H62O12/c1-18-15-20(29(33(5,6)45)47-19(2)40)50-38(46)28(18)34(7)13-14-37-17-36(37)12-11-24(49-30-27(43)26(42)25(41)21(16-39)48-30)32(3,4)22(36)9-10-23(37)35(34,8)31(38)44/h18,20-31,39,41-46H,9-17H2,1-8H3

> <INCHI_KEY>
DKNSWSKRPAEDMY-UHFFFAOYSA-N

> <FORMULA>
C38H62O12

> <MOLECULAR_WEIGHT>
710.902

> <EXACT_MASS>
710.424127436

> <JCHEM_ACCEPTOR_COUNT>
11

> <JCHEM_ATOM_COUNT>
112

> <JCHEM_AVERAGE_POLARIZABILITY>
79.28862483585124

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
7

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
1-(10,11-dihydroxy-4,6,12,17,17-pentamethyl-18-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-9-oxahexacyclo[11.9.0.0¹,²¹.0⁴,¹².0⁵,¹⁰.0¹⁶,²¹]docosan-8-yl)-2-hydroxy-2-methylpropyl acetate

> <ALOGPS_LOGP>
1.99

> <JCHEM_LOGP>
1.6325175799999987

> <ALOGPS_LOGS>
-4.10

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
7

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
12.210442966714453

> <JCHEM_PKA_STRONGEST_ACIDIC>
10.88045937014553

> <JCHEM_PKA_STRONGEST_BASIC>
-2.9810835440417778

> <JCHEM_POLAR_SURFACE_AREA>
195.59999999999997

> <JCHEM_REFRACTIVITY>
178.11950000000004

> <JCHEM_ROTATABLE_BOND_COUNT>
7

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
5.60e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
1-(10,11-dihydroxy-4,6,12,17,17-pentamethyl-18-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-9-oxahexacyclo[11.9.0.0¹,²¹.0⁴,¹².0⁵,¹⁰.0¹⁶,²¹]docosan-8-yl)-2-hydroxy-2-methylpropyl acetate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 18-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   18-APR-15         0                                  
HETATM    1  C   UNK     0      11.152   6.093   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      11.471   4.587   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      12.935   4.110   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      13.254   2.603   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0      12.109   1.573   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0      10.645   2.050   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0      10.804   0.519   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0       9.310   1.281   0.000  0.00  0.00           C+0
HETATM    9  O   UNK     0       9.148  -0.250   0.000  0.00  0.00           O+0
HETATM   10  C   UNK     0       8.167   2.313   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       7.690   0.849   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       6.635   2.153   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       6.008   0.747   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       4.476   0.587   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       3.572   1.833   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       2.040   1.674   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       2.463   0.193   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       0.655   1.000   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       1.136   2.920   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       1.763   4.327   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       3.295   4.486   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       4.199   3.240   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       4.827   4.646   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       5.731   3.400   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       6.358   4.806   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       7.890   4.966   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       8.794   3.719   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       9.565   5.052   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      10.326   3.557   0.000  0.00  0.00           C+0
HETATM   30  O   UNK     0      -0.396   2.760   0.000  0.00  0.00           O+0
HETATM   31  C   UNK     0      -1.300   4.007   0.000  0.00  0.00           C+0
HETATM   32  O   UNK     0      -2.832   3.847   0.000  0.00  0.00           O+0
HETATM   33  C   UNK     0      -3.736   5.094   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0      -5.268   4.934   0.000  0.00  0.00           C+0
HETATM   35  O   UNK     0      -6.172   6.181   0.000  0.00  0.00           O+0
HETATM   36  C   UNK     0      -3.109   6.500   0.000  0.00  0.00           C+0
HETATM   37  O   UNK     0      -4.013   7.747   0.000  0.00  0.00           O+0
HETATM   38  C   UNK     0      -1.577   6.660   0.000  0.00  0.00           C+0
HETATM   39  O   UNK     0      -0.950   8.066   0.000  0.00  0.00           O+0
HETATM   40  C   UNK     0      -0.673   5.413   0.000  0.00  0.00           C+0
HETATM   41  O   UNK     0       0.859   5.573   0.000  0.00  0.00           O+0
HETATM   42  C   UNK     0      14.718   2.126   0.000  0.00  0.00           C+0
HETATM   43  O   UNK     0      15.864   3.156   0.000  0.00  0.00           O+0
HETATM   44  C   UNK     0      17.328   2.679   0.000  0.00  0.00           C+0
HETATM   45  O   UNK     0      18.473   3.708   0.000  0.00  0.00           O+0
HETATM   46  C   UNK     0      17.647   1.172   0.000  0.00  0.00           C+0
HETATM   47  C   UNK     0      15.037   0.619   0.000  0.00  0.00           C+0
HETATM   48  C   UNK     0      15.356  -0.887   0.000  0.00  0.00           C+0
HETATM   49  C   UNK     0      16.544   0.938   0.000  0.00  0.00           C+0
HETATM   50  O   UNK     0      13.531   0.300   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3   29                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5   42                                                  
CONECT    5    4    6                                                       
CONECT    6    5    7    8   29                                             
CONECT    7    6                                                            
CONECT    8    6    9   10                                                  
CONECT    9    8                                                            
CONECT   10    8   11   12   27                                             
CONECT   11   10                                                            
CONECT   12   10   13   24                                                  
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16   22                                                  
CONECT   16   15   17   18   19                                             
CONECT   17   16                                                            
CONECT   18   16                                                            
CONECT   19   16   20   30                                                  
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   15   23   24                                             
CONECT   23   22   24                                                       
CONECT   24   23   12   22   25                                             
CONECT   25   24   26                                                       
CONECT   26   25   27                                                       
CONECT   27   26   10   28   29                                             
CONECT   28   27                                                            
CONECT   29   27    2    6                                                  
CONECT   30   19   31                                                       
CONECT   31   30   32   40                                                  
CONECT   32   31   33                                                       
CONECT   33   32   34   36                                                  
CONECT   34   33   35                                                       
CONECT   35   34                                                            
CONECT   36   33   37   38                                                  
CONECT   37   36                                                            
CONECT   38   36   39   40                                                  
CONECT   39   38                                                            
CONECT   40   38   31   41                                                  
CONECT   41   40                                                            
CONECT   42    4   43   47                                                  
CONECT   43   42   44                                                       
CONECT   44   43   45   46                                                  
CONECT   45   44                                                            
CONECT   46   44                                                            
CONECT   47   42   48   49   50                                             
CONECT   48   47                                                            
CONECT   49   47                                                            
CONECT   50   47                                                            
MASTER        0    0    0    0    0    0    0    0   50    0  112    0
END

View in JSmol

Synonyms

Value	Source
1-(10,11-Dihydroxy-4,6,12,17,17-pentamethyl-18-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-9-oxahexacyclo[11.9.0.0,.0,.0,.0,]docosan-8-yl)-2-hydroxy-2-methylpropyl acetic acid	Generator
1-(10,11-Dihydroxy-4,6,12,17,17-pentamethyl-18-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-9-oxahexacyclo[11.9.0.0¹,²¹.0⁴,¹².0⁵,¹⁰.0¹⁶,²¹]docosan-8-yl)-2-hydroxy-2-methylpropyl acetic acid	Generator

Chemical Formula

C₃₈H₆₂O₁₂

Average Mass

710.9020 Da

Monoisotopic Mass

710.42413 Da

IUPAC Name

Traditional Name

CAS Registry Number

Not Available

SMILES

CC1CC(OC2(O)C(O)C3(C)C4CCC5C6(CC46CCC3(C)C12)CCC(OC1OC(CO)C(O)C(O)C1O)C5(C)C)C(OC(C)=O)C(C)(C)O

InChI Identifier

InChI=1S/C38H62O12/c1-18-15-20(29(33(5,6)45)47-19(2)40)50-38(46)28(18)34(7)13-14-37-17-36(37)12-11-24(49-30-27(43)26(42)25(41)21(16-39)48-30)32(3,4)22(36)9-10-23(37)35(34,8)31(38)44/h18,20-31,39,41-46H,9-17H2,1-8H3

InChI Key

DKNSWSKRPAEDMY-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Actaea simplex	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as cucurbitacin glycosides. These are polycyclic compounds containing a carbohydrate derivative glycosidically linked to a curcubitane nucleus.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Steroids and steroid derivatives

Sub Class

Steroidal glycosides

Direct Parent

Cucurbitacin glycosides

Alternative Parents

Substituents

Cucurbitacin glycoside skeleton
Triterpene saponin
Triterpene glycoside
Cycloartanol-skeleton
9b,19-cyclo-lanostane-skeleton
Triterpenoid
Cycloartane-skeleton
16-hydroxysteroid
15-hydroxysteroid
Hydroxysteroid
Hexose monosaccharide
Glycosyl compound
O-glycosyl compound
Monosaccharide
Oxane
Cyclic alcohol
Tertiary alcohol
Carboxylic acid ester
Hemiacetal
Secondary alcohol
Polyol
Carboxylic acid derivative
Monocarboxylic acid or derivatives
Oxacycle
Acetal
Organoheterocyclic compound
Carbonyl group
Organic oxygen compound
Organooxygen compound
Hydrocarbon derivative
Organic oxide
Primary alcohol
Alcohol
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.99	ALOGPS
logP	1.63	ChemAxon
logS	-4.1	ALOGPS
pKa (Strongest Acidic)	10.88	ChemAxon
pKa (Strongest Basic)	-3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	11	ChemAxon
Hydrogen Donor Count	7	ChemAxon
Polar Surface Area	195.6 Å²	ChemAxon
Rotatable Bond Count	7	ChemAxon
Refractivity	178.12 m³·mol⁻¹	ChemAxon
Polarizability	79.29 Å³	ChemAxon
Number of Rings	7	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

85229121

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 1-(10,11-dihydroxy-4,6,12,17,17-pentamethyl-18-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-9-oxahexacyclo[11.9.0.0¹,²¹.0⁴,¹².0⁵,¹⁰.0¹⁶,²¹]docosan-8-yl)-2-hydroxy-2-methylpropyl acetate (NP0298731)

MOL for NP0298731 (1-(10,11-dihydroxy-4,6,12,17,17-pentamethyl-18-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-9-oxahexacyclo[11.9.0.0¹,²¹.0⁴,¹².0⁵,¹⁰.0¹⁶,²¹]docosan-8-yl)-2-hydroxy-2-methylpropyl acetate)

3D MOL for NP0298731 (1-(10,11-dihydroxy-4,6,12,17,17-pentamethyl-18-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-9-oxahexacyclo[11.9.0.0¹,²¹.0⁴,¹².0⁵,¹⁰.0¹⁶,²¹]docosan-8-yl)-2-hydroxy-2-methylpropyl acetate)

3D SDF for NP0298731 (1-(10,11-dihydroxy-4,6,12,17,17-pentamethyl-18-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-9-oxahexacyclo[11.9.0.0¹,²¹.0⁴,¹².0⁵,¹⁰.0¹⁶,²¹]docosan-8-yl)-2-hydroxy-2-methylpropyl acetate)

3D-SDF for NP0298731 (1-(10,11-dihydroxy-4,6,12,17,17-pentamethyl-18-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-9-oxahexacyclo[11.9.0.0¹,²¹.0⁴,¹².0⁵,¹⁰.0¹⁶,²¹]docosan-8-yl)-2-hydroxy-2-methylpropyl acetate)

PDB for NP0298731 (1-(10,11-dihydroxy-4,6,12,17,17-pentamethyl-18-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-9-oxahexacyclo[11.9.0.0¹,²¹.0⁴,¹².0⁵,¹⁰.0¹⁶,²¹]docosan-8-yl)-2-hydroxy-2-methylpropyl acetate)

3D PDB for NP0298731 (1-(10,11-dihydroxy-4,6,12,17,17-pentamethyl-18-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-9-oxahexacyclo[11.9.0.0¹,²¹.0⁴,¹².0⁵,¹⁰.0¹⁶,²¹]docosan-8-yl)-2-hydroxy-2-methylpropyl acetate)

SMILES for NP0298731 (1-(10,11-dihydroxy-4,6,12,17,17-pentamethyl-18-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-9-oxahexacyclo[11.9.0.0¹,²¹.0⁴,¹².0⁵,¹⁰.0¹⁶,²¹]docosan-8-yl)-2-hydroxy-2-methylpropyl acetate)

INCHI for NP0298731 (1-(10,11-dihydroxy-4,6,12,17,17-pentamethyl-18-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-9-oxahexacyclo[11.9.0.0¹,²¹.0⁴,¹².0⁵,¹⁰.0¹⁶,²¹]docosan-8-yl)-2-hydroxy-2-methylpropyl acetate)

Structure for NP0298731 (1-(10,11-dihydroxy-4,6,12,17,17-pentamethyl-18-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-9-oxahexacyclo[11.9.0.0¹,²¹.0⁴,¹².0⁵,¹⁰.0¹⁶,²¹]docosan-8-yl)-2-hydroxy-2-methylpropyl acetate)

3D Structure for NP0298731 (1-(10,11-dihydroxy-4,6,12,17,17-pentamethyl-18-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-9-oxahexacyclo[11.9.0.0¹,²¹.0⁴,¹².0⁵,¹⁰.0¹⁶,²¹]docosan-8-yl)-2-hydroxy-2-methylpropyl acetate)