NP-MRD: Showing NP-Card for acid, cholic (NP0298669)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

2.0

Created at

2022-09-10 10:04:35 UTC

Updated at

2022-09-10 10:04:35 UTC

NP-MRD ID

NP0298669

Secondary Accession Numbers

None

Natural Product Identification

Common Name

acid, cholic

Description

acid, cholic is found in Petromyzon marinus. acid, cholic was first documented in 2000 (PMID: 11041240).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652305221920172D          

 29 32  0  0  0  0            999 V2000
    0.7294   -0.4466    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9055    0.6018    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3895    0.1997    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3987    0.4304    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6955    1.7614    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3784    2.2244    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9051   -0.2209    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5297    0.8922    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7176    0.7470    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2782    2.2989    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9343    2.7844    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0934    0.4566    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4185    0.3176    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4661    2.1537    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8100    1.6682    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9249    0.9689    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0297    1.7180    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3737    1.2325    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1221    2.6391    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2812    0.3114    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7223   -0.1081    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8418    1.8632    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1858    1.3777    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7494    0.9421    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6221    1.8134    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5903    3.2699    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0009   -0.4646    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2287   -0.7594    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0332    0.6561    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  6  5  1  0  0  0  0
  7  4  1  0  0  0  0
  9  8  1  0  0  0  0
 13  1  1  0  0  0  0
 13  4  1  0  0  0  0
 14 10  1  0  0  0  0
 14 11  1  0  0  0  0
 15  8  1  0  0  0  0
 15 10  1  0  0  0  0
 16  5  1  0  0  0  0
 16 13  1  0  0  0  0
 17  6  1  0  0  0  0
 18 12  1  0  0  0  0
 19 11  1  0  0  0  0
 20 12  1  0  0  0  0
 21  7  1  0  0  0  0
 22 17  1  0  0  0  0
 22 18  1  0  0  0  0
 22 19  1  0  0  0  0
 23  2  1  0  0  0  0
 23  9  1  0  0  0  0
 23 14  1  0  0  0  0
 23 18  1  0  0  0  0
 24  3  1  0  0  0  0
 24 16  1  0  0  0  0
 24 17  1  0  0  0  0
 24 20  1  0  0  0  0
 25 15  1  0  0  0  0
 26 19  1  0  0  0  0
 27 20  1  0  0  0  0
 28 21  2  0  0  0  0
 29 21  1  0  0  0  0
M  END

     RDKit          3D

 69 72  0  0  0  0  0  0  0  0999 V2000
    4.7012    1.9190   -0.2291 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7688    0.9098   -1.0078 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.6892   -0.1710   -1.4069 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4585   -0.9160   -0.3896 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7546   -1.6794    0.6291 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8217   -1.3568    1.8365 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0003   -2.7778    0.2744 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6581    0.5806   -0.1268 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.9390    1.8904    0.3223 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1010    2.2238   -0.8788 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4160    0.8472   -1.0854 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.8598    0.8895   -0.3384 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.9713    1.4988   -1.1690 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.7027    2.7861   -1.5988 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2849    1.5069   -0.4612 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2163    0.7255    0.8486 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.4917    0.7880    1.6108 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1412   -0.4710    2.0070 C   0  0  1  0  0  0  0  0  0  0  0  0
   -6.3194   -0.6995    1.2469 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3014   -1.6884    2.0323 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8465   -1.5064    1.7316 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6896   -0.6387    0.5233 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.4981   -1.3090   -0.5903 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2914   -0.4984    0.0216 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2586   -0.9763    1.0201 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0719   -1.1514    0.3519 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.0232   -2.4262   -0.2761 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4540   -0.1523   -0.6826 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.7412   -0.9289   -1.9639 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6947    1.8906   -0.7193 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6908    1.6902    0.8322 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3271    2.9495   -0.3896 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4552    1.5545   -1.8893 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5204    0.3601   -2.0373 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2725   -0.9419   -2.0964 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0599   -1.6934   -0.9798 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2979   -0.2996    0.0536 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9275   -3.5944    0.8543 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0079    0.1780    0.8370 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6284    2.6444    0.6616 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2847    1.5801    1.1532 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6539    2.4946   -1.7761 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3657    2.9879   -0.5602 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1725    0.8064   -2.1826 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6619    1.5205    0.5816 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0088    0.8714   -2.1089 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8245    2.9277   -2.5551 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5919    2.5535   -0.1671 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0726    1.1429   -1.1295 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4438    1.2361    1.4582 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2230    1.3635    0.9622 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4012    1.4744    2.5082 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5644   -0.3565    3.0550 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2339   -1.5178    0.7024 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3436   -2.2441    3.0178 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7349   -2.4418    1.3093 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3560   -1.1081    2.6357 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4662   -2.5482    1.4969 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9400   -1.2696   -1.5604 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4576   -0.8278   -0.7672 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6044   -2.4102   -0.3841 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1178   -1.1322   -0.8976 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5593   -1.9034    1.5017 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1755   -0.1941    1.7989 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8651   -1.2741    1.1181 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6552   -3.0967    0.3682 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2064   -0.3728   -2.7539 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7257   -1.2336   -2.4123 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2438   -1.8857   -1.7915 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  7  1  0
  5  6  2  0
  2  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 13 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 18 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  1  6
 22 24  1  0
 24 25  1  0
 25 26  1  0
 26 27  1  0
 26 28  1  0
 28 29  1  6
 28  8  1  0
 28 11  1  0
 24 12  1  0
 22 16  1  0
  1 30  1  0
  1 31  1  0
  1 32  1  0
  2 33  1  6
  3 34  1  0
  3 35  1  0
  4 36  1  0
  4 37  1  0
  7 38  1  0
  8 39  1  1
  9 40  1  0
  9 41  1  0
 10 42  1  0
 10 43  1  0
 11 44  1  6
 12 45  1  1
 13 46  1  6
 14 47  1  0
 15 48  1  0
 15 49  1  0
 16 50  1  1
 17 51  1  0
 17 52  1  0
 18 53  1  1
 19 54  1  0
 20 55  1  0
 20 56  1  0
 21 57  1  0
 21 58  1  0
 23 59  1  0
 23 60  1  0
 23 61  1  0
 24 62  1  6
 25 63  1  0
 25 64  1  0
 26 65  1  1
 27 66  1  0
 29 67  1  0
 29 68  1  0
 29 69  1  0
M  END


  Mrv1652305221920172D          

 29 32  0  0  0  0            999 V2000
    0.7294   -0.4466    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9055    0.6018    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3895    0.1997    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3987    0.4304    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6955    1.7614    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3784    2.2244    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9051   -0.2209    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5297    0.8922    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7176    0.7470    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2782    2.2989    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9343    2.7844    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0934    0.4566    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4185    0.3176    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4661    2.1537    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8100    1.6682    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9249    0.9689    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0297    1.7180    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3737    1.2325    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1221    2.6391    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2812    0.3114    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7223   -0.1081    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8418    1.8632    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1858    1.3777    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7494    0.9421    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6221    1.8134    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5903    3.2699    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0009   -0.4646    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2287   -0.7594    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0332    0.6561    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  6  5  1  0  0  0  0
  7  4  1  0  0  0  0
  9  8  1  0  0  0  0
 13  1  1  0  0  0  0
 13  4  1  0  0  0  0
 14 10  1  0  0  0  0
 14 11  1  0  0  0  0
 15  8  1  0  0  0  0
 15 10  1  0  0  0  0
 16  5  1  0  0  0  0
 16 13  1  0  0  0  0
 17  6  1  0  0  0  0
 18 12  1  0  0  0  0
 19 11  1  0  0  0  0
 20 12  1  0  0  0  0
 21  7  1  0  0  0  0
 22 17  1  0  0  0  0
 22 18  1  0  0  0  0
 22 19  1  0  0  0  0
 23  2  1  0  0  0  0
 23  9  1  0  0  0  0
 23 14  1  0  0  0  0
 23 18  1  0  0  0  0
 24  3  1  0  0  0  0
 24 16  1  0  0  0  0
 24 17  1  0  0  0  0
 24 20  1  0  0  0  0
 25 15  1  0  0  0  0
 26 19  1  0  0  0  0
 27 20  1  0  0  0  0
 28 21  2  0  0  0  0
 29 21  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0298669

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(CCC(O)=O)C1CCC2C3C(O)CC4CC(O)CCC4(C)C3CC(O)C12C

> <INCHI_IDENTIFIER>
InChI=1S/C24H40O5/c1-13(4-7-21(28)29)16-5-6-17-22-18(12-20(27)24(16,17)3)23(2)9-8-15(25)10-14(23)11-19(22)26/h13-20,22,25-27H,4-12H2,1-3H3,(H,28,29)

> <INCHI_KEY>
BHQCQFFYRZLCQQ-UHFFFAOYSA-N

> <FORMULA>
C24H40O5

> <MOLECULAR_WEIGHT>
408.5714

> <EXACT_MASS>
408.28757439

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
69

> <JCHEM_AVERAGE_POLARIZABILITY>
47.34213526233842

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
4

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
4-{5,9,16-trihydroxy-2,15-dimethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-14-yl}pentanoic acid

> <ALOGPS_LOGP>
2.26

> <JCHEM_LOGP>
2.482494456666666

> <ALOGPS_LOGS>
-3.74

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
18.2963399055959

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.475012423758966

> <JCHEM_PKA_STRONGEST_BASIC>
-0.15944265438213734

> <JCHEM_POLAR_SURFACE_AREA>
97.99

> <JCHEM_REFRACTIVITY>
110.78929999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
4

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
7.38e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
4-{5,9,16-trihydroxy-2,15-dimethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-14-yl}pentanoic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 22-MAY-19   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   22-MAY-19         0                                  
HETATM    1  C   UNK     0       1.362  -0.834   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       7.290   1.123   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       2.594   0.373   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -0.744   0.803   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       1.298   3.288   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       2.573   4.152   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -1.690  -0.412   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      10.322   1.666   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       8.806   1.394   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       9.853   4.291   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       7.344   5.197   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       5.774   0.852   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       0.781   0.593   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       8.337   4.020   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      10.845   3.114   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       1.726   1.809   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       3.789   3.207   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       6.297   2.301   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       5.828   4.926   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       4.258   0.581   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      -3.215  -0.202   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       5.305   3.478   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       7.813   2.572   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       3.266   1.759   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0      12.361   3.385   0.000  0.00  0.00           O+0
HETATM   26  O   UNK     0       4.835   6.104   0.000  0.00  0.00           O+0
HETATM   27  O   UNK     0       3.735  -0.867   0.000  0.00  0.00           O+0
HETATM   28  O   UNK     0      -4.160  -1.418   0.000  0.00  0.00           O+0
HETATM   29  O   UNK     0      -3.795   1.225   0.000  0.00  0.00           O+0
CONECT    1   13                                                            
CONECT    2   23                                                            
CONECT    3   24                                                            
CONECT    4    7   13                                                       
CONECT    5    6   16                                                       
CONECT    6    5   17                                                       
CONECT    7    4   21                                                       
CONECT    8    9   15                                                       
CONECT    9    8   23                                                       
CONECT   10   14   15                                                       
CONECT   11   14   19                                                       
CONECT   12   18   20                                                       
CONECT   13    1    4   16                                                  
CONECT   14   10   11   23                                                  
CONECT   15    8   10   25                                                  
CONECT   16    5   13   24                                                  
CONECT   17    6   22   24                                                  
CONECT   18   12   22   23                                                  
CONECT   19   11   22   26                                                  
CONECT   20   12   24   27                                                  
CONECT   21    7   28   29                                                  
CONECT   22   17   18   19                                                  
CONECT   23    2    9   14   18                                             
CONECT   24    3   16   17   20                                             
CONECT   25   15                                                            
CONECT   26   19                                                            
CONECT   27   20                                                            
CONECT   28   21                                                            
CONECT   29   21                                                            
MASTER        0    0    0    0    0    0    0    0   29    0   64    0
END

View in JSmol

Synonyms

Value	Source
7-Epicholic acid	MeSH
Ursocholic acid	MeSH
3 alpha,7 beta,12 alpha-Trihydroxy-5 beta-cholan-24-Oic acid	MeSH

Chemical Formula

C₂₄H₄₀O₅

Average Mass

408.5714 Da

Monoisotopic Mass

408.28757 Da

IUPAC Name

4-{5,9,16-trihydroxy-2,15-dimethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-14-yl}pentanoic acid

Traditional Name

4-{5,9,16-trihydroxy-2,15-dimethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadecan-14-yl}pentanoic acid

CAS Registry Number

Not Available

SMILES

CC(CCC(O)=O)C1CCC2C3C(O)CC4CC(O)CCC4(C)C3CC(O)C12C

InChI Identifier

InChI=1S/C24H40O5/c1-13(4-7-21(28)29)16-5-6-17-22-18(12-20(27)24(16,17)3)23(2)9-8-15(25)10-14(23)11-19(22)26/h13-20,22,25-27H,4-12H2,1-3H3,(H,28,29)

InChI Key

BHQCQFFYRZLCQQ-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Petromyzon marinus	LOTUS Database	35616633

Chemical Taxonomy

Description

This compound belongs to the class of chemical entities known as trihydroxy bile acids, alcohols and derivatives. These are prenol lipids structurally characterized by a bile acid or alcohol which bears three hydroxyl groups.

Kingdom

Chemical entities

Super Class

Organic compounds

Class

Lipids and lipid-like molecules

Sub Class

Steroids and steroid derivatives

Direct Parent

Trihydroxy bile acids, alcohols and derivatives

Alternative Parents

Substituents

Trihydroxy bile acid, alcohol, or derivatives
3-hydroxysteroid
12-hydroxysteroid
7-hydroxysteroid
Hydroxysteroid
Cyclic alcohol
Secondary alcohol
Carboxylic acid derivative
Carboxylic acid
Polyol
Monocarboxylic acid or derivatives
Organic oxide
Alcohol
Organic oxygen compound
Hydrocarbon derivative
Carbonyl group
Organooxygen compound
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.26	ALOGPS
logP	2.48	ChemAxon
logS	-3.7	ALOGPS
pKa (Strongest Acidic)	4.48	ChemAxon
pKa (Strongest Basic)	-0.16	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	4	ChemAxon
Polar Surface Area	97.99 Å²	ChemAxon
Rotatable Bond Count	4	ChemAxon
Refractivity	110.79 m³·mol⁻¹	ChemAxon
Polarizability	47.34 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

FDB011602

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

303

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Kuramoto T, Miyamoto J, Konishi M, Hoshita T, Masul T, Une M: Bile acids in porcine fetal bile. Biol Pharm Bull. 2000 Oct;23(10):1143-6. doi: 10.1248/bpb.23.1143. [PubMed:11041240 ]
LOTUS database [Link]

Showing NP-Card for acid, cholic (NP0298669)

MOL for NP0298669 (acid, cholic)

3D MOL for NP0298669 (acid, cholic)

3D SDF for NP0298669 (acid, cholic)

3D-SDF for NP0298669 (acid, cholic)

PDB for NP0298669 (acid, cholic)

3D PDB for NP0298669 (acid, cholic)

SMILES for NP0298669 (acid, cholic)

INCHI for NP0298669 (acid, cholic)

Structure for NP0298669 (acid, cholic)

3D Structure for NP0298669 (acid, cholic)