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Record Information
Version1.0
Created at2022-09-10 03:52:11 UTC
Updated at2022-09-10 03:52:11 UTC
NP-MRD IDNP0295060
Secondary Accession NumbersNone
Natural Product Identification
Common Name(2s)-2-(dimethylamino)-n-[(3s,4s,10s,13z)-11-hydroxy-3-isopropyl-5-oxo-2-oxa-6,12-diazatricyclo[13.2.2.0⁶,¹⁰]nonadeca-1(17),11,13,15,18-pentaen-4-yl]-4-methylpentanimidic acid
DescriptionAnorldianine belongs to the class of organic compounds known as oligopeptides. These are organic compounds containing a sequence of between three and ten alpha-amino acids joined by peptide bonds. (2s)-2-(dimethylamino)-n-[(3s,4s,10s,13z)-11-hydroxy-3-isopropyl-5-oxo-2-oxa-6,12-diazatricyclo[13.2.2.0⁶,¹⁰]nonadeca-1(17),11,13,15,18-pentaen-4-yl]-4-methylpentanimidic acid is found in Psydrax arnoldiana. It was first documented in 2019 (PMID: 31404786). Based on a literature review a significant number of articles have been published on Anorldianine (PMID: 36115695) (PMID: 36115694) (PMID: 36115693) (PMID: 36115692).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC27H40N4O4
Average Mass484.6410 Da
Monoisotopic Mass484.30496 Da
IUPAC Name(2S)-2-(dimethylamino)-N-[(3S,4S,10S,13Z)-11-hydroxy-5-oxo-3-(propan-2-yl)-2-oxa-6,12-diazatricyclo[13.2.2.0^{6,10}]nonadeca-1(17),11,13,15,18-pentaen-4-yl]-4-methylpentanimidic acid
Traditional Name(2S)-2-(dimethylamino)-N-[(3S,4S,10S,13Z)-11-hydroxy-3-isopropyl-5-oxo-2-oxa-6,12-diazatricyclo[13.2.2.0^{6,10}]nonadeca-1(17),11,13,15,18-pentaen-4-yl]-4-methylpentanimidic acid
CAS Registry NumberNot Available
SMILES
CC(C)C[C@H](N(C)C)C(O)=N[C@H]1[C@@H](OC2=CC=C(C=C2)\C=C/N=C(O)[C@@H]2CCCN2C1=O)C(C)C
InChI Identifier
InChI=1S/C27H40N4O4/c1-17(2)16-22(30(5)6)26(33)29-23-24(18(3)4)35-20-11-9-19(10-12-20)13-14-28-25(32)21-8-7-15-31(21)27(23)34/h9-14,17-18,21-24H,7-8,15-16H2,1-6H3,(H,28,32)(H,29,33)/b14-13-/t21-,22-,23-,24-/m0/s1
InChI KeyMITWCWLZKRSVCI-SBGIFIGLSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Psydrax arnoldianaLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as oligopeptides. These are organic compounds containing a sequence of between three and ten alpha-amino acids joined by peptide bonds.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentOligopeptides
Alternative Parents
Substituents
  • Alpha-oligopeptide
  • Cyclic alpha peptide
  • Leucine or derivatives
  • Macrolactam
  • N-acyl-alpha amino acid or derivatives
  • Alpha-amino acid amide
  • Alpha-amino acid or derivatives
  • Alkyl aryl ether
  • Fatty amide
  • N-acyl-amine
  • Benzenoid
  • Fatty acyl
  • Tertiary carboxylic acid amide
  • Pyrrolidine
  • Tertiary amine
  • Secondary carboxylic acid amide
  • Tertiary aliphatic amine
  • Amino acid or derivatives
  • Lactam
  • Carboxamide group
  • Organoheterocyclic compound
  • Azacycle
  • Oxacycle
  • Ether
  • Amine
  • Hydrocarbon derivative
  • Organic nitrogen compound
  • Carbonyl group
  • Organic oxygen compound
  • Organonitrogen compound
  • Organic oxide
  • Organooxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP0.64ChemAxon
pKa (Strongest Acidic)2.79ChemAxon
pKa (Strongest Basic)8.3ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area97.96 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity136.91 m³·mol⁻¹ChemAxon
Polarizability52.95 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound6442830
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. eBioMedicine: The dynamics of the immune system and gut in the pathophysiology of multiple sclerosis. EBioMedicine. 2022 Sep;83:104273. doi: 10.1016/j.ebiom.2022.104273. [PubMed:36115695 ]
  2. Lundgren S, Keranen M, Wartiovaara-Kautto U, Myllymaki M: Somatic compensation of inherited bone marrow failure. Semin Hematol. 2022 Jul;59(3):167-173. doi: 10.1053/j.seminhematol.2022.07.002. Epub 2022 Aug 3. [PubMed:36115694 ]
  3. Alcedo PE, Gutierrez-Rodrigues F, Patel BA: Somatic mutations in VEXAS Syndrome and Erdheim-Chester disease: Inflammatory myeloid diseases. Semin Hematol. 2022 Jul;59(3):156-166. doi: 10.1053/j.seminhematol.2022.07.003. Epub 2022 Aug 3. [PubMed:36115693 ]
  4. Todisco G, Moura PL, Hellstrom-Lindberg E: Clinical manifestations of clonal hematopoiesis: What has SF3B1-mutant MDS taught us? Semin Hematol. 2022 Jul;59(3):150-155. doi: 10.1053/j.seminhematol.2022.08.002. Epub 2022 Aug 11. [PubMed:36115692 ]
  5. Bitchi MB, Magid AA, Kabran FA, Yao-Kouassi PA, Harakat D, Morjani H, Tonzibo FZ, Voutquenne-Nazabadioko L: Isolation and structure elucidation of cyclopeptide alkaloids from the leaves of Heisteria parvifolia. Phytochemistry. 2019 Nov;167:112081. doi: 10.1016/j.phytochem.2019.112081. Epub 2019 Aug 9. [PubMed:31404786 ]
  6. LOTUS database [Link]