NP-MRD: Showing NP-Card for n-{2-[(2e,6e)-3,7-dimethyl-9-(1,2,6-trimethylcyclohex-2-en-1-yl)nona-2,6-diene-1-sulfonyl]ethyl}guanidine (NP0293419)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

2.0

Created at

2022-09-10 01:24:53 UTC

Updated at

2022-09-10 01:24:53 UTC

NP-MRD ID

NP0293419

Secondary Accession Numbers

None

Natural Product Identification

Common Name

n-{2-[(2e,6e)-3,7-dimethyl-9-(1,2,6-trimethylcyclohex-2-en-1-yl)nona-2,6-diene-1-sulfonyl]ethyl}guanidine

Description

(-)-Agelasidine C belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units. n-{2-[(2e,6e)-3,7-dimethyl-9-(1,2,6-trimethylcyclohex-2-en-1-yl)nona-2,6-diene-1-sulfonyl]ethyl}guanidine is found in Agelas clathrodes. n-{2-[(2e,6e)-3,7-dimethyl-9-(1,2,6-trimethylcyclohex-2-en-1-yl)nona-2,6-diene-1-sulfonyl]ethyl}guanidine was first documented in 2012 (PMID: 24653665). Based on a literature review a small amount of articles have been published on (-)-Agelasidine C.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309102203242D          

 29 29  0  0  0  0            999 V2000
    2.1434    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3272    1.9659    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1018    1.9659    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9263    1.9947    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3136    2.7232    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8764    3.4228    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1381    2.7519    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5254    3.4804    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3499    3.5092    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7372    4.2376    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3000    4.9372    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5617    4.2664    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9490    4.9948    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5118    5.6945    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    6.2115    6.1317    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8122    5.2573    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0747    6.3941    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4620    7.1225    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0248    7.8222    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.4121    8.5506    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9749    9.2502    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.2366    8.5794    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  6  8  1  0  0  0  0
  2  8  1  0  0  0  0
  8  9  1  0  0  0  0
  8 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 12 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 17 19  2  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 21 23  2  0  0  0  0
 21 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  2  0  0  0  0
 27 29  1  0  0  0  0
M  END

     RDKit          3D

 70 70  0  0  0  0  0  0  0  0999 V2000
    9.7696    1.5154   -0.9909 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.3876    0.6247   -0.6658 N   0  0  0  0  0  0  0  0  0  0  0  0
    8.3951    0.6402    0.1965 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9618   -0.6551    0.5983 N   0  0  0  0  0  0  0  0  0  0  0  0
    7.8613    1.8527    0.6707 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.5158    2.2497    0.8787 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6415    2.4886   -0.2879 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3555    1.0755   -1.2921 S   0  0  0  0  0  6  0  0  0  0  0  0
    6.5972    0.5460   -1.9230 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.4605    1.4684   -2.4838 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.5769   -0.2535   -0.4048 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2489    0.1324    0.1491 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1596   -0.5281   -0.2433 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3455   -1.6343   -1.2318 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7832   -0.2106    0.2605 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2605   -1.4495    0.9114 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1082   -1.2942    1.4730 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1511   -1.9997    1.0508 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9207   -2.9854   -0.0413 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5141   -1.8386    1.6178 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5762   -1.4386    0.6980 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4952   -0.1419   -0.0361 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.4229   -0.1918   -1.1207 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7889   -0.0902   -0.8214 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1926   -1.3360   -1.5903 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5984    0.9388   -0.8960 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3709    2.2503   -0.2090 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8779    2.2976    0.0051 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4314    1.0638    0.8087 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.1153    1.4570    1.3857 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7657   -1.4334   -0.0559 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8487   -0.7773    1.6469 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.6077    2.5837    0.9068 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4860    3.1980    1.5129 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0419    1.4600    1.5576 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6421    2.9332    0.0146 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1115    3.2984   -0.9223 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2206   -0.5053    0.4611 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5303   -1.1208   -1.0596 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1568    0.9392    0.8638 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3549   -2.0182   -1.5366 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9670   -2.4496   -0.8471 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7965   -1.1589   -2.1491 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8916    0.6119    1.0079 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1777    0.1243   -0.6023 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9396   -1.6997    1.7546 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3385   -2.2860    0.2075 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2912   -0.5817    2.2697 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3315   -3.8581    0.2937 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4835   -2.4604   -0.8939 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8992   -3.4114   -0.4052 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4992   -1.2997    2.5931 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7830   -2.8961    1.9413 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5418   -1.4851    1.2167 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6392   -2.2421   -0.0981 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4141   -0.0072   -0.7656 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6418    0.5611   -1.9248 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5224   -1.1788   -1.6466 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0456   -1.1397   -2.2313 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5223   -2.0810   -0.8308 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3788   -1.6935   -2.2486 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5169    0.8262   -1.5125 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6628    3.1055   -0.8148 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8565    2.2552    0.8097 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6395    3.1748    0.6408 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3776    2.3247   -0.9829 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2221    0.9579    1.5994 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0572    1.0359    2.4251 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2409    1.2645    0.7753 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0666    2.5758    1.5790 H   0  0  0  0  0  0  0  0  0  0  0  0
 30 29  1  0
 29 28  1  0
 28 27  1  0
 27 26  1  0
 26 24  2  0
 24 25  1  0
 24 22  1  0
 22 23  1  6
 22 21  1  0
 21 20  1  0
 20 18  1  0
 18 19  1  0
 18 17  2  0
 17 16  1  0
 16 15  1  0
 15 13  1  0
 13 14  1  0
 13 12  2  0
 12 11  1  0
 11  8  1  0
  8  9  2  0
  8 10  2  0
  8  7  1  0
  7  6  1  0
  6  5  1  0
  5  3  1  0
  3  4  1  0
  3  2  2  0
 22 29  1  0
 30 68  1  0
 30 69  1  0
 30 70  1  0
 29 67  1  1
 28 65  1  0
 28 66  1  0
 27 63  1  0
 27 64  1  0
 26 62  1  0
 25 59  1  0
 25 60  1  0
 25 61  1  0
 23 56  1  0
 23 57  1  0
 23 58  1  0
 21 54  1  0
 21 55  1  0
 20 52  1  0
 20 53  1  0
 19 49  1  0
 19 50  1  0
 19 51  1  0
 17 48  1  0
 16 46  1  0
 16 47  1  0
 15 44  1  0
 15 45  1  0
 14 41  1  0
 14 42  1  0
 14 43  1  0
 12 40  1  0
 11 38  1  0
 11 39  1  0
  7 36  1  0
  7 37  1  0
  6 34  1  0
  6 35  1  0
  5 33  1  0
  4 31  1  0
  4 32  1  0
  2  1  1  0
M  END


  Mrv1652309102203242D          

 29 29  0  0  0  0            999 V2000
    2.1434    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3272    1.9659    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1018    1.9659    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9263    1.9947    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3136    2.7232    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8764    3.4228    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1381    2.7519    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5254    3.4804    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3499    3.5092    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7372    4.2376    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3000    4.9372    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5617    4.2664    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9490    4.9948    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5118    5.6945    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    6.2115    6.1317    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8122    5.2573    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0747    6.3941    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4620    7.1225    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0248    7.8222    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.4121    8.5506    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9749    9.2502    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.2366    8.5794    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  6  8  1  0  0  0  0
  2  8  1  0  0  0  0
  8  9  1  0  0  0  0
  8 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 12 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 17 19  2  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 21 23  2  0  0  0  0
 21 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  2  0  0  0  0
 27 29  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0293419

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC1CCC=C(C)C1(C)CC\C(C)=C\CC\C(C)=C\CS(=O)(=O)CCNC(N)=N

> <INCHI_IDENTIFIER>
InChI=1S/C23H41N3O2S/c1-18(12-14-23(5)20(3)10-7-11-21(23)4)8-6-9-19(2)13-16-29(27,28)17-15-26-22(24)25/h8,10,13,21H,6-7,9,11-12,14-17H2,1-5H3,(H4,24,25,26)/b18-8+,19-13+

> <INCHI_KEY>
ZKAIIIOGWKNEAA-OKFWMGGISA-N

> <FORMULA>
C23H41N3O2S

> <MOLECULAR_WEIGHT>
423.66

> <EXACT_MASS>
423.291948746

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
70

> <JCHEM_AVERAGE_POLARIZABILITY>
49.41872909847298

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
N-{2-[(2E,6E)-3,7-dimethyl-9-(1,2,6-trimethylcyclohex-2-en-1-yl)nona-2,6-diene-1-sulfonyl]ethyl}guanidine

> <JCHEM_LOGP>
3.852823512333332

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA_STRONGEST_ACIDIC>
16.30154600732234

> <JCHEM_PKA_STRONGEST_BASIC>
11.912740867584423

> <JCHEM_POLAR_SURFACE_AREA>
96.04

> <JCHEM_REFRACTIVITY>
136.3133

> <JCHEM_ROTATABLE_BOND_COUNT>
11

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
N-{2-[(2E,6E)-3,7-dimethyl-9-(1,2,6-trimethylcyclohex-2-en-1-yl)nona-2,6-diene-1-sulfonyl]ethyl}guanidine

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 10-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   10-SEP-22         0                                  
HETATM    1  C   UNK     0       4.001   2.310   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       2.667   1.540   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       2.667  -0.000   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       0.000  -0.000   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       0.000   1.540   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -1.334   2.310   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       1.334   2.310   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       0.611   3.670   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       2.057   3.670   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       3.596   3.723   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       4.319   5.083   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       3.503   6.389   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       5.858   5.137   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       6.581   6.497   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       8.120   6.550   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       8.843   7.910   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       8.027   9.216   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      10.382   7.964   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      11.105   9.324   0.000  0.00  0.00           C+0
HETATM   21  S   UNK     0      10.289  10.630   0.000  0.00  0.00           S+0
HETATM   22  O   UNK     0      11.595  11.446   0.000  0.00  0.00           O+0
HETATM   23  O   UNK     0       8.983   9.814   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0       9.473  11.936   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      10.196  13.295   0.000  0.00  0.00           C+0
HETATM   26  N   UNK     0       9.380  14.601   0.000  0.00  0.00           N+0
HETATM   27  C   UNK     0      10.103  15.961   0.000  0.00  0.00           C+0
HETATM   28  N   UNK     0       9.287  17.267   0.000  0.00  0.00           N+0
HETATM   29  N   UNK     0      11.642  16.015   0.000  0.00  0.00           N+0
CONECT    1    2                                                            
CONECT    2    1    3    8                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7    8                                                  
CONECT    7    6                                                            
CONECT    8    6    2    9   10                                             
CONECT    9    8                                                            
CONECT   10    8   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13   14                                                  
CONECT   13   12                                                            
CONECT   14   12   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18   19                                                  
CONECT   18   17                                                            
CONECT   19   17   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22   23   24                                             
CONECT   22   21                                                            
CONECT   23   21                                                            
CONECT   24   21   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25   27                                                       
CONECT   27   26   28   29                                                  
CONECT   28   27                                                            
CONECT   29   27                                                            
MASTER        0    0    0    0    0    0    0    0   29    0   58    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₃H₄₁N₃O₂S

Average Mass

423.6600 Da

Monoisotopic Mass

423.29195 Da

IUPAC Name

N-{2-[(2E,6E)-3,7-dimethyl-9-(1,2,6-trimethylcyclohex-2-en-1-yl)nona-2,6-diene-1-sulfonyl]ethyl}guanidine

Traditional Name

N-{2-[(2E,6E)-3,7-dimethyl-9-(1,2,6-trimethylcyclohex-2-en-1-yl)nona-2,6-diene-1-sulfonyl]ethyl}guanidine

CAS Registry Number

Not Available

SMILES

CC1CCC=C(C)C1(C)CC\C(C)=C\CC\C(C)=C\CS(=O)(=O)CCNC(N)=N

InChI Identifier

InChI=1S/C23H41N3O2S/c1-18(12-14-23(5)20(3)10-7-11-21(23)4)8-6-9-19(2)13-16-29(27,28)17-15-26-22(24)25/h8,10,13,21H,6-7,9,11-12,14-17H2,1-5H3,(H4,24,25,26)/b18-8+,19-13+

InChI Key

ZKAIIIOGWKNEAA-OKFWMGGISA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Agelas clathrodes	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Diterpenoids

Direct Parent

Diterpenoids

Alternative Parents

Substituents

Diterpenoid
Sulfonyl
Sulfone
Guanidine
Organic 1,3-dipolar compound
Propargyl-type 1,3-dipolar organic compound
Carboximidamide
Organic nitrogen compound
Organic oxygen compound
Organopnictogen compound
Organic oxide
Hydrocarbon derivative
Organosulfur compound
Organonitrogen compound
Aliphatic homomonocyclic compound

Molecular Framework

Aliphatic homomonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.85	ChemAxon
pKa (Strongest Acidic)	16.3	ChemAxon
pKa (Strongest Basic)	11.91	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	96.04 Å²	ChemAxon
Rotatable Bond Count	11	ChemAxon
Refractivity	136.31 m³·mol⁻¹	ChemAxon
Polarizability	49.42 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

4578397

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

5467446

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Stout EP, Yu LC, Molinski TF: Antifungal Diterpene Alkaloids from the Caribbean Sponge Agelas citrina: Unified Configurational Assignments of Agelasidines and Agelasines. European J Org Chem. 2012 Sep;2012(27):5131-5135. doi: 10.1002/ejoc.201200572. [PubMed:24653665 ]
LOTUS database [Link]

Showing NP-Card for n-{2-[(2e,6e)-3,7-dimethyl-9-(1,2,6-trimethylcyclohex-2-en-1-yl)nona-2,6-diene-1-sulfonyl]ethyl}guanidine (NP0293419)

MOL for NP0293419 (n-{2-[(2e,6e)-3,7-dimethyl-9-(1,2,6-trimethylcyclohex-2-en-1-yl)nona-2,6-diene-1-sulfonyl]ethyl}guanidine)

3D MOL for NP0293419 (n-{2-[(2e,6e)-3,7-dimethyl-9-(1,2,6-trimethylcyclohex-2-en-1-yl)nona-2,6-diene-1-sulfonyl]ethyl}guanidine)

3D SDF for NP0293419 (n-{2-[(2e,6e)-3,7-dimethyl-9-(1,2,6-trimethylcyclohex-2-en-1-yl)nona-2,6-diene-1-sulfonyl]ethyl}guanidine)

3D-SDF for NP0293419 (n-{2-[(2e,6e)-3,7-dimethyl-9-(1,2,6-trimethylcyclohex-2-en-1-yl)nona-2,6-diene-1-sulfonyl]ethyl}guanidine)

PDB for NP0293419 (n-{2-[(2e,6e)-3,7-dimethyl-9-(1,2,6-trimethylcyclohex-2-en-1-yl)nona-2,6-diene-1-sulfonyl]ethyl}guanidine)

3D PDB for NP0293419 (n-{2-[(2e,6e)-3,7-dimethyl-9-(1,2,6-trimethylcyclohex-2-en-1-yl)nona-2,6-diene-1-sulfonyl]ethyl}guanidine)

SMILES for NP0293419 (n-{2-[(2e,6e)-3,7-dimethyl-9-(1,2,6-trimethylcyclohex-2-en-1-yl)nona-2,6-diene-1-sulfonyl]ethyl}guanidine)

INCHI for NP0293419 (n-{2-[(2e,6e)-3,7-dimethyl-9-(1,2,6-trimethylcyclohex-2-en-1-yl)nona-2,6-diene-1-sulfonyl]ethyl}guanidine)

Structure for NP0293419 (n-{2-[(2e,6e)-3,7-dimethyl-9-(1,2,6-trimethylcyclohex-2-en-1-yl)nona-2,6-diene-1-sulfonyl]ethyl}guanidine)

3D Structure for NP0293419 (n-{2-[(2e,6e)-3,7-dimethyl-9-(1,2,6-trimethylcyclohex-2-en-1-yl)nona-2,6-diene-1-sulfonyl]ethyl}guanidine)