NP-MRD: Showing NP-Card for 5-hydroxy-2-[(1e)-2-phenylethenyl]chromen-4-one (NP0291754)

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Record Information

Version

1.0

Created at

2022-09-09 22:57:45 UTC

Updated at

2022-09-09 22:57:46 UTC

NP-MRD ID

NP0291754

Secondary Accession Numbers

None

Natural Product Identification

Common Name

5-hydroxy-2-[(1e)-2-phenylethenyl]chromen-4-one

Description

(E)-5-hydroxy-2-styrylchromone belongs to the class of organic compounds known as chromones. Chromones are compounds containing a benzopyran-4-one moiety. 5-hydroxy-2-[(1e)-2-phenylethenyl]chromen-4-one is found in Imperata cylindrica. It was first documented in 2010 (PMID: 20554208). Based on a literature review very few articles have been published on (e)-5-hydroxy-2-styrylchromone.

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 32 34  0  0  0  0  0  0  0  0999 V2000
   -3.1319    0.9769    2.0891 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5838    0.5914    1.0416 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1873    0.5126    0.9760 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5421    0.0991   -0.1409 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9019    0.0052   -0.2444 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7598    0.3024    0.7111 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1996    0.2110    0.6142 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9496    0.5643    1.7193 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3214    0.4832    1.6440 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9897    0.0645    0.5149 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1976   -0.2788   -0.5661 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8144   -0.2070   -0.5193 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2699   -0.2300   -1.1734 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5990   -0.1737   -1.1649 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2739   -0.5428   -2.3065 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6358   -0.4926   -2.3193 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3406   -0.0809   -1.2145 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6990    0.3079   -0.0199 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4390    0.7105    1.0544 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3143    0.2402   -0.0550 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6755    0.8073    1.8844 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3506   -0.3399   -1.1870 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2851    0.6460    1.6464 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4851    0.9049    2.6469 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9251    0.7627    2.5196 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0692    0.0082    0.4776 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6844   -0.6123   -1.4709 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3058   -0.5012   -1.4258 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6783   -0.8642   -3.1638 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1591   -0.7906   -3.2386 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4150   -0.0579   -1.2725 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2950    1.0132    1.9433 H   0  0  0  0  0  0  0  0  0  0  0  0
 19 18  1  0
 18 20  2  0
 20  2  1  0
  2  1  2  0
  2  3  1  0
  3  4  2  0
  4 13  1  0
 13 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  2  0
  4  5  1  0
  5  6  2  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  2  0
 17 18  1  0
 12  7  1  0
 14 20  1  0
 19 32  1  0
  3 21  1  0
 15 29  1  0
 16 30  1  0
 17 31  1  0
  5 22  1  0
  6 23  1  0
  8 24  1  0
  9 25  1  0
 10 26  1  0
 11 27  1  0
 12 28  1  0
M  END


  Mrv1652309102200572D          

 20 22  0  0  0  0            999 V2000
    1.4289   -2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8579    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8579    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
  7 12  1  0  0  0  0
  4 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 18 20  2  0  0  0  0
  2 20  1  0  0  0  0
 14 20  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0291754

> <DATABASE_NAME>
NP-MRD

> <SMILES>
OC1=C2C(=O)C=C(OC2=CC=C1)\C=C\C1=CC=CC=C1

> <INCHI_IDENTIFIER>
InChI=1S/C17H12O3/c18-14-7-4-8-16-17(14)15(19)11-13(20-16)10-9-12-5-2-1-3-6-12/h1-11,18H/b10-9+

> <INCHI_KEY>
TVYPHWROTJAZCQ-MDZDMXLPSA-N

> <FORMULA>
C17H12O3

> <MOLECULAR_WEIGHT>
264.28

> <EXACT_MASS>
264.078644246

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
32

> <JCHEM_AVERAGE_POLARIZABILITY>
28.28731304767236

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
5-hydroxy-2-[(E)-2-phenylethenyl]-4H-chromen-4-one

> <JCHEM_LOGP>
4.195568783666666

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
15.896073480357565

> <JCHEM_PKA_STRONGEST_ACIDIC>
7.449128520311505

> <JCHEM_PKA_STRONGEST_BASIC>
-5.35714570006201

> <JCHEM_POLAR_SURFACE_AREA>
46.53

> <JCHEM_REFRACTIVITY>
79.2707

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
5-hydroxy-2-[(E)-2-phenylethenyl]chromen-4-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 10-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   10-SEP-22         0                                  
HETATM    1  O   UNK     0       2.667  -4.620   0.000  0.00  0.00           O+0
HETATM    2  C   UNK     0       2.667  -3.080   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       1.334  -2.310   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       0.000   0.000   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -1.334  -0.770   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -2.667   0.000   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -4.001  -0.770   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -5.335   0.000   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -5.335   1.540   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -4.001   2.310   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      -2.667   1.540   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0       2.667   0.000   0.000  0.00  0.00           O+0
HETATM   14  C   UNK     0       4.001  -0.770   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       5.335   0.000   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       6.668  -0.770   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       6.668  -2.310   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       5.335  -3.080   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0       5.335  -4.620   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0       4.001  -2.310   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   20                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5   13                                                  
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8   12                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11    7                                                       
CONECT   13    4   14                                                       
CONECT   14   13   15   20                                                  
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18    2   14                                                  
MASTER        0    0    0    0    0    0    0    0   20    0   44    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₇H₁₂O₃

Average Mass

264.2800 Da

Monoisotopic Mass

264.07864 Da

IUPAC Name

5-hydroxy-2-[(E)-2-phenylethenyl]-4H-chromen-4-one

Traditional Name

5-hydroxy-2-[(E)-2-phenylethenyl]chromen-4-one

CAS Registry Number

Not Available

SMILES

OC1=C2C(=O)C=C(OC2=CC=C1)\C=C\C1=CC=CC=C1

InChI Identifier

InChI=1S/C17H12O3/c18-14-7-4-8-16-17(14)15(19)11-13(20-16)10-9-12-5-2-1-3-6-12/h1-11,18H/b10-9+

InChI Key

TVYPHWROTJAZCQ-MDZDMXLPSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Imperata cylindrica	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as chromones. Chromones are compounds containing a benzopyran-4-one moiety.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Benzopyrans

Sub Class

1-benzopyrans

Direct Parent

Chromones

Alternative Parents

Substituents

Chromone
Styrene
1-hydroxy-4-unsubstituted benzenoid
1-hydroxy-2-unsubstituted benzenoid
Phenol
Pyranone
Monocyclic benzene moiety
Pyran
Benzenoid
Heteroaromatic compound
Vinylogous acid
Oxacycle
Hydrocarbon derivative
Organic oxide
Organooxygen compound
Organic oxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	4.2	ChemAxon
pKa (Strongest Acidic)	7.45	ChemAxon
pKa (Strongest Basic)	-5.4	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	46.53 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	79.27 m³·mol⁻¹	ChemAxon
Polarizability	28.29 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

4978967

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

6477677

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Rocha-Pereira J, Cunha R, Pinto DC, Silva AM, Nascimento MS: (E)-2-styrylchromones as potential anti-norovirus agents. Bioorg Med Chem. 2010 Jun 15;18(12):4195-201. doi: 10.1016/j.bmc.2010.05.006. Epub 2010 May 7. [PubMed:20554208 ]
LOTUS database [Link]

Showing NP-Card for 5-hydroxy-2-[(1e)-2-phenylethenyl]chromen-4-one (NP0291754)

MOL for NP0291754 (5-hydroxy-2-[(1e)-2-phenylethenyl]chromen-4-one)

3D MOL for NP0291754 (5-hydroxy-2-[(1e)-2-phenylethenyl]chromen-4-one)

3D SDF for NP0291754 (5-hydroxy-2-[(1e)-2-phenylethenyl]chromen-4-one)

3D-SDF for NP0291754 (5-hydroxy-2-[(1e)-2-phenylethenyl]chromen-4-one)

PDB for NP0291754 (5-hydroxy-2-[(1e)-2-phenylethenyl]chromen-4-one)

3D PDB for NP0291754 (5-hydroxy-2-[(1e)-2-phenylethenyl]chromen-4-one)

SMILES for NP0291754 (5-hydroxy-2-[(1e)-2-phenylethenyl]chromen-4-one)

INCHI for NP0291754 (5-hydroxy-2-[(1e)-2-phenylethenyl]chromen-4-one)

Structure for NP0291754 (5-hydroxy-2-[(1e)-2-phenylethenyl]chromen-4-one)

3D Structure for NP0291754 (5-hydroxy-2-[(1e)-2-phenylethenyl]chromen-4-one)