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Record Information
Version1.0
Created at2022-09-09 22:57:21 UTC
Updated at2022-09-09 22:57:22 UTC
NP-MRD IDNP0291749
Secondary Accession NumbersNone
Natural Product Identification
Common Name(1s,2s,4r,7e,9s,11s)-9-hydroxy-4,8-dimethyl-12-methylidene-3,14-dioxatricyclo[9.3.0.0²,⁴]tetradec-7-en-13-one
Description9Beta-hydroxyparthenolide belongs to the class of organic compounds known as germacranolides and derivatives. These are sesquiterpene lactones with a structure based on the germacranolide skeleton, characterized by a gamma lactone fused to a 1,7-dimethylcyclodec-1-ene moiety. (1s,2s,4r,7e,9s,11s)-9-hydroxy-4,8-dimethyl-12-methylidene-3,14-dioxatricyclo[9.3.0.0²,⁴]tetradec-7-en-13-one is found in Anthemis cupaniana and Anvillea garcinii. It was first documented in 2014 (PMID: 24998377). Based on a literature review a significant number of articles have been published on 9beta-hydroxyparthenolide (PMID: 34199475) (PMID: 32283756) (PMID: 27919107) (PMID: 25647341).
Structure
Thumb
Synonyms
ValueSource
9b-HydroxyparthenolideGenerator
9Β-hydroxyparthenolideGenerator
9-HydroxyparthenolideMeSH
9alpha-HydroxyparthenolideMeSH
Chemical FormulaC15H20O4
Average Mass264.3210 Da
Monoisotopic Mass264.13616 Da
IUPAC Name(1S,2S,4R,7E,9S,11S)-9-hydroxy-4,8-dimethyl-12-methylidene-3,14-dioxatricyclo[9.3.0.0^{2,4}]tetradec-7-en-13-one
Traditional Name(1S,2S,4R,7E,9S,11S)-9-hydroxy-4,8-dimethyl-12-methylidene-3,14-dioxatricyclo[9.3.0.0^{2,4}]tetradec-7-en-13-one
CAS Registry NumberNot Available
SMILES
C\C1=C/CC[C@@]2(C)O[C@H]2[C@H]2OC(=O)C(=C)[C@@H]2C[C@@H]1O
InChI Identifier
InChI=1S/C15H20O4/c1-8-5-4-6-15(3)13(19-15)12-10(7-11(8)16)9(2)14(17)18-12/h5,10-13,16H,2,4,6-7H2,1,3H3/b8-5+/t10-,11-,12-,13-,15+/m0/s1
InChI KeyRZUCCKARTVHQBW-MPFAERRBSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Anthemis cupanianaLOTUS Database
Anvillea garciniiLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as germacranolides and derivatives. These are sesquiterpene lactones with a structure based on the germacranolide skeleton, characterized by a gamma lactone fused to a 1,7-dimethylcyclodec-1-ene moiety.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTerpene lactones
Direct ParentGermacranolides and derivatives
Alternative Parents
Substituents
  • Germacranolide
  • Germacrane sesquiterpenoid
  • Sesquiterpenoid
  • Gamma butyrolactone
  • Alpha,beta-unsaturated carboxylic ester
  • Enoate ester
  • Oxolane
  • Carboxylic acid ester
  • Lactone
  • Secondary alcohol
  • Carboxylic acid derivative
  • Dialkyl ether
  • Oxirane
  • Ether
  • Oxacycle
  • Organoheterocyclic compound
  • Monocarboxylic acid or derivatives
  • Alcohol
  • Organic oxide
  • Hydrocarbon derivative
  • Organic oxygen compound
  • Carbonyl group
  • Organooxygen compound
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.84ChemAxon
pKa (Strongest Acidic)14.6ChemAxon
pKa (Strongest Basic)-3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area59.06 ŲChemAxon
Rotatable Bond Count0ChemAxon
Refractivity70.07 m³·mol⁻¹ChemAxon
Polarizability27.69 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00045198
Chemspider ID16737368
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound14466188
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Aati HY, Perveen S, Orfali R, Al-Taweel AM, Peng J, Tabassum S, Abdel-Kader MS, Yusufoglu HS, Taglialatela-Scafati O: Phytochemical Analysis of Anvillea garcinii Leaves: Identification of Garcinamines F-H and Their Antiproliferative Activities. Plants (Basel). 2021 Jun 2;10(6). pii: plants10061130. doi: 10.3390/plants10061130. [PubMed:34199475 ]
  2. Perveen S, Alqahtani J, Orfali R, Aati HY, Al-Taweel AM, Ibrahim TA, Khan A, Yusufoglu HS, Abdel-Kader MS, Taglialatela-Scafati O: Antibacterial and Antifungal Sesquiterpenoids from Aerial Parts of Anvillea garcinii. Molecules. 2020 Apr 9;25(7). pii: molecules25071730. doi: 10.3390/molecules25071730. [PubMed:32283756 ]
  3. El Bouakher A, Jismy B, Allouchi H, Duverger E, Barkaoui L, El Hakmaoui A, Daniellou R, Guillaumet G, Akssira M: Synthetic Modification of 9alpha- and 9beta-Hydroxyparthenolide by Heck or Acylation Reactions and Evaluation of Cytotoxic Activities. Planta Med. 2017 May;83(7):661-671. doi: 10.1055/s-0042-119864. Epub 2016 Dec 5. [PubMed:27919107 ]
  4. Destandau E, Boukhris MA, Zubrzycki S, Akssira M, Rhaffari LE, Elfakir C: Centrifugal partition chromatography elution gradient for isolation of sesquiterpene lactones and flavonoids from Anvillea radiata. J Chromatogr B Analyt Technol Biomed Life Sci. 2015 Mar 15;985:29-37. doi: 10.1016/j.jchromb.2015.01.019. Epub 2015 Jan 21. [PubMed:25647341 ]
  5. Moumou M, El Bouakher A, Allouchi H, El Hakmaoui A, Benharref A, Mathieu V, Guillaumet G, Akssira M: Synthesis and biological evaluation of 9alpha- and 9beta-hydroxyamino-parthenolides as novel anticancer agents. Bioorg Med Chem Lett. 2014 Aug 15;24(16):4014-8. doi: 10.1016/j.bmcl.2014.06.019. Epub 2014 Jun 14. [PubMed:24998377 ]
  6. LOTUS database [Link]