NP-MRD: Showing NP-Card for 6-hydroxy-5,10-dimethyl-5,10,19-triazapentacyclo[10.7.1.0²,⁷.0⁹,²⁰.0¹³,¹⁸]icosa-1,3,6,9(20),12,14,16,18-octaene-8,11-dione (NP0289869)

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Record Information

Version

2.0

Created at

2022-09-09 20:15:58 UTC

Updated at

2022-09-09 20:15:58 UTC

NP-MRD ID

NP0289869

Secondary Accession Numbers

None

Natural Product Identification

Common Name

6-hydroxy-5,10-dimethyl-5,10,19-triazapentacyclo[10.7.1.0²,⁷.0⁹,²⁰.0¹³,¹⁸]icosa-1,3,6,9(20),12,14,16,18-octaene-8,11-dione

Description

Alpkinidine belongs to the class of organic compounds known as phenanthrolines. These are aromatic polycyclic compounds containing the phenanthroline skeleton, which is a derivative of phenanthrene, and consists of two pyridine rings non-linearly joined by a benzene ring. 6-hydroxy-5,10-dimethyl-5,10,19-triazapentacyclo[10.7.1.0²,⁷.0⁹,²⁰.0¹³,¹⁸]icosa-1,3,6,9(20),12,14,16,18-octaene-8,11-dione is found in Neopetrosia carbonaria. 6-hydroxy-5,10-dimethyl-5,10,19-triazapentacyclo[10.7.1.0²,⁷.0⁹,²⁰.0¹³,¹⁸]icosa-1,3,6,9(20),12,14,16,18-octaene-8,11-dione was first documented in 2002 (PMID: 12492342). Based on a literature review a small amount of articles have been published on Alpkinidine (PMID: 23350352) (PMID: 35722017) (PMID: 35721899).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309092222152D          

 25 29  0  0  0  0            999 V2000
   -1.9140   -2.0252    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0920   -2.0956    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6201   -1.4189    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2019   -1.4893    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5520   -2.2364    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0800   -2.9130    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7420   -2.8427    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2139   -3.5193    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4301   -3.6601    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0419   -4.3368    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2521   -3.7305    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7240   -3.0538    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3739   -2.3067    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1392   -1.6865    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.9286   -1.9262    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5310   -1.3625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3204   -1.6022    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5074   -2.4057    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9051   -2.9695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1157   -2.7297    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5134   -3.2935    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5293   -4.1184    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2060   -4.5903    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7498   -4.3884    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.5100   -5.1778    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  2  7  1  0  0  0  0
  7  8  1  0  0  0  0
  6  9  1  0  0  0  0
  9 10  2  0  0  0  0
  9 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
  5 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
 15 20  1  0  0  0  0
 20 21  2  0  0  0  0
 12 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 22 24  1  0  0  0  0
 11 24  1  0  0  0  0
 24 25  1  0  0  0  0
M  END

     RDKit          3D

 38 42  0  0  0  0  0  0  0  0999 V2000
   -5.3800   -1.0641   -0.1022 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9182   -0.9744   -0.0994 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1993   -2.0931   -0.2148 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8208   -2.0562   -0.2169 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2048   -0.8390   -0.0974 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9293    0.3438    0.0244 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2948    0.2085    0.0167 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0843    1.3562    0.1352 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3414    1.5891    0.1469 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9954    2.6513    0.2563 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0494    1.6514    0.1472 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7677    0.4818    0.0268 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1783   -0.7552   -0.0949 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9980   -1.8184   -0.2051 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.3378   -1.6441   -0.1933 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2035   -2.7299   -0.3059 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5760   -2.5996   -0.2987 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0929   -1.3268   -0.1731 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2944   -0.2094   -0.0576 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9245   -0.3966   -0.0706 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1114    0.7093    0.0439 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2389    2.0736    0.1803 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3399    2.6586    0.2343 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9836    2.6230    0.2408 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.6928    4.0248    0.3827 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6651   -1.8331   -0.8594 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6971   -1.4025    0.8886 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8441   -0.1194   -0.4262 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7314   -3.0346   -0.3070 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2253   -2.9332   -0.3075 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1540    1.8062    1.0333 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7557   -3.6971   -0.4011 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2152   -3.4770   -0.3895 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.1685   -1.1832   -0.1633 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6714    0.7833    0.0404 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5726    4.6275    0.0683 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4523    4.3149    1.4339 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1395    4.2837   -0.3162 H   0  0  0  0  0  0  0  0  0  0  0  0
 25 24  1  0
 24 22  1  0
 22 23  2  0
 22 21  1  0
 21 20  2  0
 20 19  1  0
 19 18  2  0
 18 17  1  0
 17 16  2  0
 16 15  1  0
 15 14  2  0
 14 13  1  0
 13  5  2  0
  5  4  1  0
  4  3  2  0
  3  2  1  0
  2  1  1  0
  2  7  1  0
  7  8  1  0
  7  6  2  0
  6  9  1  0
  9 10  2  0
  9 11  1  0
 11 12  2  0
 11 24  1  0
 12 21  1  0
 15 20  1  0
 12 13  1  0
  6  5  1  0
 25 36  1  0
 25 37  1  0
 25 38  1  0
 19 35  1  0
 18 34  1  0
 17 33  1  0
 16 32  1  0
  4 30  1  0
  3 29  1  0
  1 26  1  0
  1 27  1  0
  1 28  1  0
  8 31  1  0
M  END


  Mrv1652309092222152D          

 25 29  0  0  0  0            999 V2000
   -1.9140   -2.0252    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0920   -2.0956    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6201   -1.4189    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2019   -1.4893    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5520   -2.2364    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0800   -2.9130    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7420   -2.8427    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2139   -3.5193    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4301   -3.6601    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0419   -4.3368    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2521   -3.7305    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7240   -3.0538    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3739   -2.3067    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1392   -1.6865    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.9286   -1.9262    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5310   -1.3625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3204   -1.6022    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5074   -2.4057    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9051   -2.9695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1157   -2.7297    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5134   -3.2935    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5293   -4.1184    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2060   -4.5903    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7498   -4.3884    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.5100   -5.1778    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  2  7  1  0  0  0  0
  7  8  1  0  0  0  0
  6  9  1  0  0  0  0
  9 10  2  0  0  0  0
  9 11  1  0  0  0  0
 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
  5 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 17 18  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
 15 20  1  0  0  0  0
 20 21  2  0  0  0  0
 12 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  2  0  0  0  0
 22 24  1  0  0  0  0
 11 24  1  0  0  0  0
 24 25  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0289869

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CN1C(=O)C2=C3C=CC=CC3=NC3=C4C=CN(C)C(O)=C4C(=O)C1=C23

> <INCHI_IDENTIFIER>
InChI=1S/C19H13N3O3/c1-21-8-7-10-13(18(21)24)17(23)16-14-12(19(25)22(16)2)9-5-3-4-6-11(9)20-15(10)14/h3-8,24H,1-2H3

> <INCHI_KEY>
FNAXJBORRPAWON-UHFFFAOYSA-N

> <FORMULA>
C19H13N3O3

> <MOLECULAR_WEIGHT>
331.331

> <EXACT_MASS>
331.095691291

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
38

> <JCHEM_AVERAGE_POLARIZABILITY>
34.659972397322676

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
6-hydroxy-5,10-dimethyl-5,10,19-triazapentacyclo[10.7.1.0^{2,7}.0^{9,20}.0^{13,18}]icosa-1,3,6,9(20),12,14,16,18-octaene-8,11-dione

> <JCHEM_LOGP>
0.3961501066666668

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
7.9427461570590205

> <JCHEM_PKA_STRONGEST_BASIC>
1.548457068232337

> <JCHEM_POLAR_SURFACE_AREA>
73.21

> <JCHEM_REFRACTIVITY>
108.1539

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
6-hydroxy-5,10-dimethyl-5,10,19-triazapentacyclo[10.7.1.0^{2,7}.0^{9,20}.0^{13,18}]icosa-1,3,6,9(20),12,14,16,18-octaene-8,11-dione

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 09-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   09-SEP-22         0                                  
HETATM    1  C   UNK     0      -3.573  -3.780   0.000  0.00  0.00           C+0
HETATM    2  N   UNK     0      -2.038  -3.912   0.000  0.00  0.00           N+0
HETATM    3  C   UNK     0      -1.158  -2.649   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       0.377  -2.780   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       1.030  -4.175   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       0.149  -5.438   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -1.385  -5.306   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0      -2.266  -6.569   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0       0.803  -6.832   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0      -0.078  -8.095   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0       2.337  -6.964   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       3.218  -5.700   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       2.565  -4.306   0.000  0.00  0.00           C+0
HETATM   14  N   UNK     0       3.993  -3.148   0.000  0.00  0.00           N+0
HETATM   15  C   UNK     0       5.467  -3.596   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       6.591  -2.543   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       8.065  -2.991   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       8.414  -4.491   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       7.290  -5.543   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       5.816  -5.096   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       4.692  -6.148   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       4.721  -7.688   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0       5.985  -8.569   0.000  0.00  0.00           O+0
HETATM   24  N   UNK     0       3.266  -8.192   0.000  0.00  0.00           N+0
HETATM   25  C   UNK     0       2.819  -9.665   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3    7                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6   13                                                  
CONECT    6    5    7    9                                                  
CONECT    7    6    2    8                                                  
CONECT    8    7                                                            
CONECT    9    6   10   11                                                  
CONECT   10    9                                                            
CONECT   11    9   12   24                                                  
CONECT   12   11   13   21                                                  
CONECT   13   12    5   14                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16   20                                                  
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   15   21                                                  
CONECT   21   20   12   22                                                  
CONECT   22   21   23   24                                                  
CONECT   23   22                                                            
CONECT   24   22   11   25                                                  
CONECT   25   24                                                            
MASTER        0    0    0    0    0    0    0    0   25    0   58    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₉H₁₃N₃O₃

Average Mass

331.3310 Da

Monoisotopic Mass

331.09569 Da

IUPAC Name

6-hydroxy-5,10-dimethyl-5,10,19-triazapentacyclo[10.7.1.0^{2,7}.0^{9,20}.0^{13,18}]icosa-1,3,6,9(20),12,14,16,18-octaene-8,11-dione

Traditional Name

6-hydroxy-5,10-dimethyl-5,10,19-triazapentacyclo[10.7.1.0^{2,7}.0^{9,20}.0^{13,18}]icosa-1,3,6,9(20),12,14,16,18-octaene-8,11-dione

CAS Registry Number

Not Available

SMILES

CN1C(=O)C2=C3C=CC=CC3=NC3=C4C=CN(C)C(O)=C4C(=O)C1=C23

InChI Identifier

InChI=1S/C19H13N3O3/c1-21-8-7-10-13(18(21)24)17(23)16-14-12(19(25)22(16)2)9-5-3-4-6-11(9)20-15(10)14/h3-8,24H,1-2H3

InChI Key

FNAXJBORRPAWON-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Neopetrosia carbonaria	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as phenanthrolines. These are aromatic polycyclic compounds containing the phenanthroline skeleton, which is a derivative of phenanthrene, and consists of two pyridine rings non-linearly joined by a benzene ring.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Phenanthrolines

Sub Class

Not Available

Direct Parent

Phenanthrolines

Alternative Parents

Substituents

1,8-phenanthroline
Benzoquinoline
Acridine
Quinoline
Isoquinoline
Pyridine carboxylic acid or derivatives
Indole or derivatives
Hydroxypyridine
Benzenoid
Pyridine
Heteroaromatic compound
Vinylogous amide
Vinylogous acid
Tertiary carboxylic acid amide
Lactam
Carboxamide group
Azacycle
Carboxylic acid derivative
Organic nitrogen compound
Organic oxygen compound
Organopnictogen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Organonitrogen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	0.4	ChemAxon
pKa (Strongest Acidic)	7.94	ChemAxon
pKa (Strongest Basic)	1.55	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	73.21 Å²	ChemAxon
Rotatable Bond Count	0	ChemAxon
Refractivity	108.15 m³·mol⁻¹	ChemAxon
Polarizability	34.66 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

135504679

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Valeriote FA, Tenney K, Media J, Pietraszkiewicz H, Edelstein M, Johnson TA, Amagata T, Crews P: Discovery and development of anticancer agents from marine sponges: perspectives based on a chemistry-experimental therapeutics collaborative program. J Exp Ther Oncol. 2012;10(2):119-34. [PubMed:23350352 ]
Thale Z, Johnson T, Tenney K, Wenzel PJ, Lobkovsky E, Clardy J, Media J, Pietraszkiewicz H, Valeriote FA, Crews P: Structures and cytotoxic properties of sponge-derived bisannulated acridines. J Org Chem. 2002 Dec 27;67(26):9384-91. doi: 10.1021/jo026459o. [PubMed:12492342 ]
Buccini M, Dhoro F, Tham L, Skelton BW, Williams CM, Piggott MJ: Toward the Total Synthesis of Alpkinidine: Michael Addition to Isoquinolinetrione CE Ring-System Synthons. ACS Omega. 2022 Jun 1;7(23):19093-19105. doi: 10.1021/acsomega.2c02117. eCollection 2022 Jun 14. [PubMed:35722017 ]
Buccini M, Tham L, Dhoro F, Skelton BW, Williams CM, Piggott MJ: Toward the Total Synthesis of Alpkinidine: Synthesis of Haloquinone CE Ring System Synthons and Attempted Nucleophilic Bisannulation. ACS Omega. 2022 Jun 1;7(23):19080-19092. doi: 10.1021/acsomega.2c02116. eCollection 2022 Jun 14. [PubMed:35721899 ]
LOTUS database [Link]

Showing NP-Card for 6-hydroxy-5,10-dimethyl-5,10,19-triazapentacyclo[10.7.1.0²,⁷.0⁹,²⁰.0¹³,¹⁸]icosa-1,3,6,9(20),12,14,16,18-octaene-8,11-dione (NP0289869)

MOL for NP0289869 (6-hydroxy-5,10-dimethyl-5,10,19-triazapentacyclo[10.7.1.0²,⁷.0⁹,²⁰.0¹³,¹⁸]icosa-1,3,6,9(20),12,14,16,18-octaene-8,11-dione)

3D MOL for NP0289869 (6-hydroxy-5,10-dimethyl-5,10,19-triazapentacyclo[10.7.1.0²,⁷.0⁹,²⁰.0¹³,¹⁸]icosa-1,3,6,9(20),12,14,16,18-octaene-8,11-dione)

3D SDF for NP0289869 (6-hydroxy-5,10-dimethyl-5,10,19-triazapentacyclo[10.7.1.0²,⁷.0⁹,²⁰.0¹³,¹⁸]icosa-1,3,6,9(20),12,14,16,18-octaene-8,11-dione)

3D-SDF for NP0289869 (6-hydroxy-5,10-dimethyl-5,10,19-triazapentacyclo[10.7.1.0²,⁷.0⁹,²⁰.0¹³,¹⁸]icosa-1,3,6,9(20),12,14,16,18-octaene-8,11-dione)

PDB for NP0289869 (6-hydroxy-5,10-dimethyl-5,10,19-triazapentacyclo[10.7.1.0²,⁷.0⁹,²⁰.0¹³,¹⁸]icosa-1,3,6,9(20),12,14,16,18-octaene-8,11-dione)

3D PDB for NP0289869 (6-hydroxy-5,10-dimethyl-5,10,19-triazapentacyclo[10.7.1.0²,⁷.0⁹,²⁰.0¹³,¹⁸]icosa-1,3,6,9(20),12,14,16,18-octaene-8,11-dione)

SMILES for NP0289869 (6-hydroxy-5,10-dimethyl-5,10,19-triazapentacyclo[10.7.1.0²,⁷.0⁹,²⁰.0¹³,¹⁸]icosa-1,3,6,9(20),12,14,16,18-octaene-8,11-dione)

INCHI for NP0289869 (6-hydroxy-5,10-dimethyl-5,10,19-triazapentacyclo[10.7.1.0²,⁷.0⁹,²⁰.0¹³,¹⁸]icosa-1,3,6,9(20),12,14,16,18-octaene-8,11-dione)

Structure for NP0289869 (6-hydroxy-5,10-dimethyl-5,10,19-triazapentacyclo[10.7.1.0²,⁷.0⁹,²⁰.0¹³,¹⁸]icosa-1,3,6,9(20),12,14,16,18-octaene-8,11-dione)

3D Structure for NP0289869 (6-hydroxy-5,10-dimethyl-5,10,19-triazapentacyclo[10.7.1.0²,⁷.0⁹,²⁰.0¹³,¹⁸]icosa-1,3,6,9(20),12,14,16,18-octaene-8,11-dione)