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Record Information
Version2.0
Created at2022-09-09 18:26:14 UTC
Updated at2022-09-09 18:26:14 UTC
NP-MRD IDNP0288650
Secondary Accession NumbersNone
Natural Product Identification
Common Name(2s,4ar,6r,7r,8s,8ar)-2-(3,4-dihydroxyphenyl)-6-(hydroxymethyl)-8-{[(2s,3r,4r,5r,6s)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}-hexahydro-2h-pyrano[2,3-b][1,4]dioxin-7-yl (2e)-3-(3,4-dihydroxyphenyl)prop-2-enoate
DescriptionCrenatoside belongs to the class of organic compounds known as coumaric acids and derivatives. These are aromatic compounds containing Aromatic compounds containing a cinnamic acid moiety (or a derivative thereof) hydroxylated at the C2 (ortho-), C3 (meta-), or C4 (para-) carbon atom of the benzene ring. (2s,4ar,6r,7r,8s,8ar)-2-(3,4-dihydroxyphenyl)-6-(hydroxymethyl)-8-{[(2s,3r,4r,5r,6s)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}-hexahydro-2h-pyrano[2,3-b][1,4]dioxin-7-yl (2e)-3-(3,4-dihydroxyphenyl)prop-2-enoate is found in Globularia trichosantha and Orobanche crenata. (2s,4ar,6r,7r,8s,8ar)-2-(3,4-dihydroxyphenyl)-6-(hydroxymethyl)-8-{[(2s,3r,4r,5r,6s)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}-hexahydro-2h-pyrano[2,3-b][1,4]dioxin-7-yl (2e)-3-(3,4-dihydroxyphenyl)prop-2-enoate was first documented in 2005 (PMID: 16496678). Based on a literature review a significant number of articles have been published on Crenatoside (PMID: 34467725) (PMID: 34311276) (PMID: 33909279) (PMID: 33198532) (PMID: 32767975) (PMID: 21246823).
Structure
Thumb
Synonyms
ValueSource
1',2'-(3,4-Dihydroxyphenyl-alpha,beta-dioxoethanol)-4'-O-caffeoyl-O-rhamnopyranosyl-1-3-O-glucopyranosideMeSH
Chemical FormulaC29H34O15
Average Mass622.5760 Da
Monoisotopic Mass622.18977 Da
IUPAC Name(2S,4aR,6R,7R,8S,8aR)-2-(3,4-dihydroxyphenyl)-6-(hydroxymethyl)-8-{[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}-hexahydro-2H-pyrano[2,3-b][1,4]dioxin-7-yl (2E)-3-(3,4-dihydroxyphenyl)prop-2-enoate
Traditional Name(2S,4aR,6R,7R,8S,8aR)-2-(3,4-dihydroxyphenyl)-6-(hydroxymethyl)-8-{[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy}-hexahydro-2H-pyrano[2,3-b][1,4]dioxin-7-yl (2E)-3-(3,4-dihydroxyphenyl)prop-2-enoate
CAS Registry NumberNot Available
SMILES
C[C@@H]1O[C@@H](O[C@H]2[C@H](OC(=O)\C=C\C3=CC=C(O)C(O)=C3)[C@@H](CO)O[C@H]3OC[C@@H](O[C@H]23)C2=CC=C(O)C(O)=C2)[C@H](O)[C@H](O)[C@H]1O
InChI Identifier
InChI=1S/C29H34O15/c1-12-22(36)23(37)24(38)28(40-12)44-26-25(43-21(35)7-3-13-2-5-15(31)17(33)8-13)19(10-30)42-29-27(26)41-20(11-39-29)14-4-6-16(32)18(34)9-14/h2-9,12,19-20,22-34,36-38H,10-11H2,1H3/b7-3+/t12-,19+,20+,22-,23+,24+,25+,26-,27+,28-,29+/m0/s1
InChI KeyFPOYEEKZOOLVJA-WLLRULDYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Globularia trichosanthaLOTUS Database
Orobanche crenataLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as coumaric acids and derivatives. These are aromatic compounds containing Aromatic compounds containing a cinnamic acid moiety (or a derivative thereof) hydroxylated at the C2 (ortho-), C3 (meta-), or C4 (para-) carbon atom of the benzene ring.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassCinnamic acids and derivatives
Sub ClassHydroxycinnamic acids and derivatives
Direct ParentCoumaric acids and derivatives
Alternative Parents
Substituents
  • Coumaric acid or derivatives
  • Cinnamic acid ester
  • Disaccharide
  • Glycosyl compound
  • O-glycosyl compound
  • Pyranodioxin
  • Catechol
  • Styrene
  • 1-hydroxy-4-unsubstituted benzenoid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Fatty acid ester
  • Phenol
  • Para-dioxane
  • Monocyclic benzene moiety
  • Fatty acyl
  • Oxane
  • Benzenoid
  • Enoate ester
  • Alpha,beta-unsaturated carboxylic ester
  • Secondary alcohol
  • Carboxylic acid ester
  • Acetal
  • Polyol
  • Carboxylic acid derivative
  • Organoheterocyclic compound
  • Dialkyl ether
  • Ether
  • Oxacycle
  • Monocarboxylic acid or derivatives
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Carbonyl group
  • Organooxygen compound
  • Alcohol
  • Primary alcohol
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.06ChemAxon
pKa (Strongest Acidic)8.91ChemAxon
pKa (Strongest Basic)-3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count14ChemAxon
Hydrogen Donor Count8ChemAxon
Polar Surface Area234.29 ŲChemAxon
Rotatable Bond Count8ChemAxon
Refractivity146.1 m³·mol⁻¹ChemAxon
Polarizability61.21 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00002763
Chemspider ID23327073
KEGG Compound IDC10481
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound44593361
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Zhan LL, Huang WM, Bian YT, Li YG, Chen J, Liu J, Shao J: [A new labdane-type diterpenoids from Callicarpa nudiflora]. Zhongguo Zhong Yao Za Zhi. 2021 Aug;46(16):4139-4144. doi: 10.19540/j.cnki.cjcmm.20210429.202. [PubMed:34467725 ]
  2. Piwowarczyk R, Ochmian I, Lachowicz S, Kapusta I, Malinowska K, Ruraz K: Correlational nutritional relationships and interactions between expansive holoparasite Orobanche laxissima and woody hosts on metal-rich soils. Phytochemistry. 2021 Oct;190:112844. doi: 10.1016/j.phytochem.2021.112844. Epub 2021 Jul 23. [PubMed:34311276 ]
  3. Gao W, Zheng S, Hwang E, Yi TH, Wang YS: Effects of phenylethanol glycosides from Orobanche cernua Loefling on UVB-Induced skin photodamage: a comparative study. Photochem Photobiol Sci. 2021 May;20(5):599-614. doi: 10.1007/s43630-021-00038-6. Epub 2021 Apr 28. [PubMed:33909279 ]
  4. Abo-Qotb SMS, Hassanein AMM, Desoukey SY, Wanas AS, Tawfik HM, Orabi MAA: In vivo anti-inflammatory and hepatoprotective activities of Orobanche crenata (Forssk.) aerial parts in relation to its phytomolecules. Nat Prod Res. 2022 Feb;36(4):1067-1072. doi: 10.1080/14786419.2020.1845167. Epub 2020 Nov 16. [PubMed:33198532 ]
  5. Reis ACC, Silva BM, de Moura HMM, Pereira GR, Brandao GC: Anti-Zika virus activity and chemical characterization by ultra-high performance liquid chromatography (UPLC-DAD-UV-MS) of ethanol extracts in Tecoma species. BMC Complement Med Ther. 2020 Aug 7;20(1):246. doi: 10.1186/s12906-020-03040-0. [PubMed:32767975 ]
  6. Wang D, Yin Z, Zhang Q, Ye W, Zhang X, Zhang J: [Nonvolatile chemical constituents from Pogostemon cablin]. Zhongguo Zhong Yao Za Zhi. 2010 Oct;35(20):2704-7. [PubMed:21246823 ]
  7. Huang L, Mu S, Zhang J, Deng B, Song Z, Hao X: [Chemical constituents from involatile moiety of Pogostemon cablin]. Zhongguo Zhong Yao Za Zhi. 2009 Feb;34(4):410-3. [PubMed:19459301 ]
  8. Zhang K, Gong XC, Cao LB, Jia JR, Tu PF, Song QQ, Song YL: [Chemome profiling and comparison of three Orobanche medicinal plants]. Zhongguo Zhong Yao Za Zhi. 2020 Jul;45(13):3175-3182. doi: 10.19540/j.cnki.cjcmm.20200408.201. [PubMed:32726027 ]
  9. Zhang M, Ren X, Yue S, Zhao Q, Shao C, Wang C: Simultaneous Quantification of Four Phenylethanoid Glycosides in Rat Plasma by UPLC-MS/MS and Its Application to a Pharmacokinetic Study of Acanthus Ilicifolius Herb. Molecules. 2019 Aug 28;24(17):3117. doi: 10.3390/molecules24173117. [PubMed:31466218 ]
  10. K R, V S: Discovery of Potent Neuraminidase Inhibitors Using a Combination of Pharmacophore-Based Virtual Screening and Molecular Simulation Approach. Appl Biochem Biotechnol. 2018 Apr;184(4):1421-1440. doi: 10.1007/s12010-017-2625-y. Epub 2017 Oct 23. [PubMed:29063410 ]
  11. Han GQ, Li CF, Wang XQ, Li MH, Li J: [Determination of phenylethanoid glycosides in Orobanche coerulescens]. Zhongguo Zhong Yao Za Zhi. 2015 Nov;40(21):4218-22. [PubMed:27071260 ]
  12. Chen BL, Wang YJ, Guo H, Zeng GY: Design, synthesis, and biological evaluation of crenatoside analogues as novel influenza neuraminidase inhibitors. Eur J Med Chem. 2016 Feb 15;109:199-205. doi: 10.1016/j.ejmech.2015.12.031. Epub 2016 Jan 4. [PubMed:26774928 ]
  13. De Abreu MB, Malafronte N, Van Kiem P, Braca A: A new iridoid from Adenosma caeruleum R. Br. Fitoterapia. 2009 Sep;80(6):358-60. doi: 10.1016/j.fitote.2009.05.003. Epub 2009 May 11. [PubMed:19442709 ]
  14. Amakura Y, Yoshimura M, Mouri C, Mikage M, Kawahara N, Goda Y, Yoshida T: Convenient TLC-based Identification Test for the Crude Drug "Pogostemoni Herba". Yakugaku Zasshi. 2008 Dec;128(12):1833-7. doi: 10.1248/yakushi.128.1833. [PubMed:19043303 ]
  15. Wu XM, Pei YH, Zhou JY: [Chemical constituents of the aerial parts of Rhamnus crenatus]. Yao Xue Xue Bao. 2005 Dec;40(12):1127-30. [PubMed:16496678 ]
  16. LOTUS database [Link]