NP-MRD: Showing NP-Card for (1r)-2-[(1r,2s,4as,4bs,8as,10as)-2-formyl-4b,8,8,10a-tetramethyl-decahydro-1h-phenanthren-1-yl]-1-(2-hydroxy-5-oxo-2h-furan-3-yl)ethyl acetate (NP0288544)

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Record Information

Version

2.0

Created at

2022-09-09 18:17:35 UTC

Updated at

2022-09-09 18:17:35 UTC

NP-MRD ID

NP0288544

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1r)-2-[(1r,2s,4as,4bs,8as,10as)-2-formyl-4b,8,8,10a-tetramethyl-decahydro-1h-phenanthren-1-yl]-1-(2-hydroxy-5-oxo-2h-furan-3-yl)ethyl acetate

Description

(1R)-2-[(1R,2S,4aS,4bS,8aS,10aS)-2-formyl-4b,8,8,10a-tetramethyl-tetradecahydrophenanthren-1-yl]-1-(2-hydroxy-5-oxo-2,5-dihydrofuran-3-yl)ethyl acetate belongs to the class of organic compounds known as cheilanthane sesterterpenoids. These are sesterterpnoids with a structure based on the cheilanthane backbone. Cheilanthane is a tricyclic compound consisting of a tetradecahydrophenanthrene ring system that carries two methyl groups at the 1-position, one methyl group at the 4a-,7-, and 8a-positions, as well as a 3-methylpentyl group at the 8-position. Based on a literature review very few articles have been published on (1R)-2-[(1R,2S,4aS,4bS,8aS,10aS)-2-formyl-4b,8,8,10a-tetramethyl-tetradecahydrophenanthren-1-yl]-1-(2-hydroxy-5-oxo-2,5-dihydrofuran-3-yl)ethyl acetate.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309092220172D          

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M  END

     RDKit          3D

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M  END


  Mrv1652309092220172D          

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 22 23  1  6  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 13 25  1  0  0  0  0
  7 25  1  0  0  0  0
 25 26  1  6  0  0  0
  5 27  1  0  0  0  0
 27 28  2  0  0  0  0
 28 29  1  0  0  0  0
 29 30  2  0  0  0  0
 29 31  1  0  0  0  0
 31 32  1  0  0  0  0
 27 32  1  0  0  0  0
 32 33  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0288544

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(=O)O[C@H](C[C@@H]1[C@H](CC[C@H]2[C@@]1(C)CC[C@H]1C(C)(C)CCC[C@]21C)C=O)C1=CC(=O)OC1O

> <INCHI_IDENTIFIER>
InChI=1S/C27H40O6/c1-16(29)32-20(18-13-23(30)33-24(18)31)14-19-17(15-28)7-8-22-26(19,4)12-9-21-25(2,3)10-6-11-27(21,22)5/h13,15,17,19-22,24,31H,6-12,14H2,1-5H3/t17-,19-,20-,21+,22+,24?,26+,27+/m1/s1

> <INCHI_KEY>
QPTVAYUFYIWGFW-WVWHCSABSA-N

> <FORMULA>
C27H40O6

> <MOLECULAR_WEIGHT>
460.611

> <EXACT_MASS>
460.282489008

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
73

> <JCHEM_AVERAGE_POLARIZABILITY>
50.95637443233128

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1R)-2-[(1R,2S,4aS,4bS,8aS,10aS)-2-formyl-4b,8,8,10a-tetramethyl-tetradecahydrophenanthren-1-yl]-1-(2-hydroxy-5-oxo-2,5-dihydrofuran-3-yl)ethyl acetate

> <JCHEM_LOGP>
4.366960403

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
11.731393549846343

> <JCHEM_PKA_STRONGEST_ACIDIC>
5.409882975641454

> <JCHEM_PKA_STRONGEST_BASIC>
-4.303377839772161

> <JCHEM_POLAR_SURFACE_AREA>
89.9

> <JCHEM_REFRACTIVITY>
123.86109999999996

> <JCHEM_ROTATABLE_BOND_COUNT>
6

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(1R)-2-[(1R,2S,4aS,4bS,8aS,10aS)-2-formyl-4b,8,8,10a-tetramethyl-decahydro-1H-phenanthren-1-yl]-1-(2-hydroxy-5-oxo-2H-furan-3-yl)ethyl acetate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 09-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   09-SEP-22         0                                  
HETATM    1  C   UNK     0       1.224  -8.305   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -0.240  -8.781   0.000  0.00  0.00           C+0
HETATM    3  O   UNK     0      -0.560 -10.288   0.000  0.00  0.00           O+0
HETATM    4  O   UNK     0      -1.385  -7.751   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0      -1.065  -6.244   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       0.400  -5.768   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       1.170  -4.435   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       0.400  -3.101   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -1.239  -3.295   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0      -1.910  -1.767   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0       1.170  -1.767   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       2.710  -1.767   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       3.480  -3.101   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       5.020  -3.101   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       4.250  -1.767   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       5.790  -1.767   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       7.330  -1.767   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       8.100  -3.101   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       7.330  -4.435   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       8.777  -4.962   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       7.063  -5.951   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       5.790  -4.435   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       5.020  -5.768   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       3.480  -5.768   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       2.710  -4.435   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       1.940  -5.768   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      -2.209  -5.214   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      -3.715  -5.534   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      -4.485  -4.200   0.000  0.00  0.00           C+0
HETATM   30  O   UNK     0      -6.017  -4.039   0.000  0.00  0.00           O+0
HETATM   31  O   UNK     0      -3.455  -3.056   0.000  0.00  0.00           O+0
HETATM   32  C   UNK     0      -2.048  -3.682   0.000  0.00  0.00           C+0
HETATM   33  O   UNK     0      -0.714  -2.912   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3    4                                                  
CONECT    3    2                                                            
CONECT    4    2    5                                                       
CONECT    5    4    6   27                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8   25                                                  
CONECT    8    7    9   11                                                  
CONECT    9    8   10                                                       
CONECT   10    9                                                            
CONECT   11    8   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14   25                                                  
CONECT   14   13   15   16   22                                             
CONECT   15   14                                                            
CONECT   16   14   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20   21   22                                             
CONECT   20   19                                                            
CONECT   21   19                                                            
CONECT   22   19   14   23                                                  
CONECT   23   22   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   13    7   26                                             
CONECT   26   25                                                            
CONECT   27    5   28   32                                                  
CONECT   28   27   29                                                       
CONECT   29   28   30   31                                                  
CONECT   30   29                                                            
CONECT   31   29   32                                                       
CONECT   32   31   27   33                                                  
CONECT   33   32                                                            
MASTER        0    0    0    0    0    0    0    0   33    0   72    0
END

View in JSmol

Synonyms

Value	Source
(1R)-2-[(1R,2S,4AS,4BS,8as,10as)-2-formyl-4b,8,8,10a-tetramethyl-tetradecahydrophenanthren-1-yl]-1-(2-hydroxy-5-oxo-2,5-dihydrofuran-3-yl)ethyl acetic acid	Generator

Chemical Formula

C₂₇H₄₀O₆

Average Mass

460.6110 Da

Monoisotopic Mass

460.28249 Da

IUPAC Name

(1R)-2-[(1R,2S,4aS,4bS,8aS,10aS)-2-formyl-4b,8,8,10a-tetramethyl-tetradecahydrophenanthren-1-yl]-1-(2-hydroxy-5-oxo-2,5-dihydrofuran-3-yl)ethyl acetate

Traditional Name

(1R)-2-[(1R,2S,4aS,4bS,8aS,10aS)-2-formyl-4b,8,8,10a-tetramethyl-decahydro-1H-phenanthren-1-yl]-1-(2-hydroxy-5-oxo-2H-furan-3-yl)ethyl acetate

CAS Registry Number

Not Available

SMILES

CC(=O)O[C@H](C[C@@H]1[C@H](CC[C@H]2[C@@]1(C)CC[C@H]1C(C)(C)CCC[C@]21C)C=O)C1=CC(=O)OC1O

InChI Identifier

InChI=1S/C27H40O6/c1-16(29)32-20(18-13-23(30)33-24(18)31)14-19-17(15-28)7-8-22-26(19,4)12-9-21-25(2,3)10-6-11-27(21,22)5/h13,15,17,19-22,24,31H,6-12,14H2,1-5H3/t17-,19-,20-,21+,22+,24?,26+,27+/m1/s1

InChI Key

QPTVAYUFYIWGFW-WVWHCSABSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as cheilanthane sesterterpenoids. These are sesterterpnoids with a structure based on the cheilanthane backbone. Cheilanthane is a tricyclic compound consisting of a tetradecahydrophenanthrene ring system that carries two methyl groups at the 1-position, one methyl group at the 4a-,7-, and 8a-positions, as well as a 3-methylpentyl group at the 8-position.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Sesterterpenoids

Direct Parent

Cheilanthane sesterterpenoids

Alternative Parents

Substituents

Cheilanthane sesterterpenoid
Steroid
Hydrophenanthrene
Phenanthrene
2-furanone
Dicarboxylic acid or derivatives
Dihydrofuran
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Carboxylic acid ester
Hemiacetal
Lactone
Oxacycle
Carboxylic acid derivative
Organoheterocyclic compound
Hydrocarbon derivative
Organic oxide
Aldehyde
Carbonyl group
Organic oxygen compound
Organooxygen compound
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	4.37	ChemAxon
pKa (Strongest Acidic)	5.41	ChemAxon
pKa (Strongest Basic)	-4.3	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	89.9 Å²	ChemAxon
Rotatable Bond Count	6	ChemAxon
Refractivity	123.86 m³·mol⁻¹	ChemAxon
Polarizability	50.96 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

9714650

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

11539871

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (1r)-2-[(1r,2s,4as,4bs,8as,10as)-2-formyl-4b,8,8,10a-tetramethyl-decahydro-1h-phenanthren-1-yl]-1-(2-hydroxy-5-oxo-2h-furan-3-yl)ethyl acetate (NP0288544)

MOL for NP0288544 ((1r)-2-[(1r,2s,4as,4bs,8as,10as)-2-formyl-4b,8,8,10a-tetramethyl-decahydro-1h-phenanthren-1-yl]-1-(2-hydroxy-5-oxo-2h-furan-3-yl)ethyl acetate)

3D MOL for NP0288544 ((1r)-2-[(1r,2s,4as,4bs,8as,10as)-2-formyl-4b,8,8,10a-tetramethyl-decahydro-1h-phenanthren-1-yl]-1-(2-hydroxy-5-oxo-2h-furan-3-yl)ethyl acetate)

3D SDF for NP0288544 ((1r)-2-[(1r,2s,4as,4bs,8as,10as)-2-formyl-4b,8,8,10a-tetramethyl-decahydro-1h-phenanthren-1-yl]-1-(2-hydroxy-5-oxo-2h-furan-3-yl)ethyl acetate)

3D-SDF for NP0288544 ((1r)-2-[(1r,2s,4as,4bs,8as,10as)-2-formyl-4b,8,8,10a-tetramethyl-decahydro-1h-phenanthren-1-yl]-1-(2-hydroxy-5-oxo-2h-furan-3-yl)ethyl acetate)

PDB for NP0288544 ((1r)-2-[(1r,2s,4as,4bs,8as,10as)-2-formyl-4b,8,8,10a-tetramethyl-decahydro-1h-phenanthren-1-yl]-1-(2-hydroxy-5-oxo-2h-furan-3-yl)ethyl acetate)

3D PDB for NP0288544 ((1r)-2-[(1r,2s,4as,4bs,8as,10as)-2-formyl-4b,8,8,10a-tetramethyl-decahydro-1h-phenanthren-1-yl]-1-(2-hydroxy-5-oxo-2h-furan-3-yl)ethyl acetate)

SMILES for NP0288544 ((1r)-2-[(1r,2s,4as,4bs,8as,10as)-2-formyl-4b,8,8,10a-tetramethyl-decahydro-1h-phenanthren-1-yl]-1-(2-hydroxy-5-oxo-2h-furan-3-yl)ethyl acetate)

INCHI for NP0288544 ((1r)-2-[(1r,2s,4as,4bs,8as,10as)-2-formyl-4b,8,8,10a-tetramethyl-decahydro-1h-phenanthren-1-yl]-1-(2-hydroxy-5-oxo-2h-furan-3-yl)ethyl acetate)

Structure for NP0288544 ((1r)-2-[(1r,2s,4as,4bs,8as,10as)-2-formyl-4b,8,8,10a-tetramethyl-decahydro-1h-phenanthren-1-yl]-1-(2-hydroxy-5-oxo-2h-furan-3-yl)ethyl acetate)

3D Structure for NP0288544 ((1r)-2-[(1r,2s,4as,4bs,8as,10as)-2-formyl-4b,8,8,10a-tetramethyl-decahydro-1h-phenanthren-1-yl]-1-(2-hydroxy-5-oxo-2h-furan-3-yl)ethyl acetate)