NP-MRD: Showing NP-Card for 1-{[(3as,5ar,6r,9as,9bs)-5a-methyl-3-methylidene-2-oxo-9-({[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)-octahydro-3ah-naphtho[1,2-b]furan-6-yl]oxy}-3-(4-hydroxyphenyl)-1-oxopropan-2-yl 2-hydroxy-3-methylbutanoate (NP0288083)

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Record Information

Version

2.0

Created at

2022-09-09 17:38:24 UTC

Updated at

2022-09-09 17:38:24 UTC

NP-MRD ID

NP0288083

Secondary Accession Numbers

None

Natural Product Identification

Common Name

1-{[(3as,5ar,6r,9as,9bs)-5a-methyl-3-methylidene-2-oxo-9-({[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)-octahydro-3ah-naphtho[1,2-b]furan-6-yl]oxy}-3-(4-hydroxyphenyl)-1-oxopropan-2-yl 2-hydroxy-3-methylbutanoate

Description

Ixerisoside H belongs to the class of organic compounds known as glycodepsipeptides. Glycodepsipeptides are compounds in which a carbohydrate component is linked to a depsipeptide component. 1-{[(3as,5ar,6r,9as,9bs)-5a-methyl-3-methylidene-2-oxo-9-({[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)-octahydro-3ah-naphtho[1,2-b]furan-6-yl]oxy}-3-(4-hydroxyphenyl)-1-oxopropan-2-yl 2-hydroxy-3-methylbutanoate is found in Ixeris repens. Based on a literature review very few articles have been published on Ixerisoside H.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309092219382D          

 49 53  0  0  1  0            999 V2000
    0.4179   -4.3735    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0969   -3.6134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7066   -3.4264    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3302   -3.9664    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7770   -2.6044    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0169   -2.2834    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.5231   -2.9071    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3333   -2.7512    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6033   -1.9716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0632   -1.3480    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8734   -1.1921    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2531   -1.5039    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2870   -0.8802    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0971   -1.0361    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6372   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3672    0.3671    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.5570    0.5230    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2870    1.3025    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.5231    1.4584    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7932    2.2380    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8271    1.9262    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.5570    2.7057    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6372    1.7702    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.1773    2.3939    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9073    0.9907    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7174    0.8348    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0169   -0.1007    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7932    0.0552    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3333   -0.5684    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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    1.8734    0.9907    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2236    0.5230    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4936    1.3025    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9535    1.9262    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    1.7702    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6033    2.3939    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8734    3.1734    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3333    3.7971    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6835    3.3293    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2236    2.7057    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7637   -0.1007    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.5738    0.0552    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8439    0.8348    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.1139   -0.5684    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8439   -1.3480    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9240   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1941    0.3671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4641   -1.0361    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  6  5  1  6  0  0  0
  6  7  1  0  0  0  0
  7  2  1  1  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  1  0  0  0
 10 12  1  0  0  0  0
 12  6  1  1  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 16 15  1  1  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  1  0  0  0
 19 20  1  0  0  0  0
 18 21  1  0  0  0  0
 21 22  1  6  0  0  0
 21 23  1  0  0  0  0
 23 24  1  1  0  0  0
 23 25  1  0  0  0  0
 16 25  1  0  0  0  0
 25 26  1  6  0  0  0
 13 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 10 29  1  0  0  0  0
 29 30  1  1  0  0  0
 30 31  1  0  0  0  0
 31 32  2  0  0  0  0
 31 33  1  0  0  0  0
 33 34  1  0  0  0  0
 34 35  1  0  0  0  0
 35 36  2  0  0  0  0
 36 37  1  0  0  0  0
 37 38  2  0  0  0  0
 38 39  1  0  0  0  0
 38 40  1  0  0  0  0
 40 41  2  0  0  0  0
 35 41  1  0  0  0  0
 33 42  1  0  0  0  0
 42 43  1  0  0  0  0
 43 44  2  0  0  0  0
 43 45  1  0  0  0  0
 45 46  1  0  0  0  0
 45 47  1  0  0  0  0
 47 48  1  0  0  0  0
 47 49  1  0  0  0  0
M  END

     RDKit          3D

 97101  0  0  0  0  0  0  0  0999 V2000
    2.8944    5.0579    0.2425 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9224    3.9075   -0.4053 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0652    3.3228   -1.1057 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1835    3.8869   -1.3010 O   0  0  0  0  0  0  0  0  0  0  0  0
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    2.6913    1.6365   -0.6222 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.8456    2.9255   -0.5958 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.8343    2.8498    0.4797 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0988    1.6837    0.1143 C   0  0  0  0  0  0  0  0  0  0  0  0
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    1.7822    0.5573   -1.0612 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3928   -0.7173   -1.4907 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.8966   -0.7574   -1.4759 C   0  0  0  0  0  0  0  0  0  0  0  0
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    5.8017   -0.7053   -0.2371 C   0  0  2  0  0  0  0  0  0  0  0  0
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    7.8255   -2.7622    1.9053 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.1795   -2.9732    2.1065 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.3036   -0.5994    0.9002 C   0  0  1  0  0  0  0  0  0  0  0  0
    8.9355   -0.1057   -0.2170 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.2892    0.4139    1.3700 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.6439    0.0111    2.5347 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.3130    0.6335    0.2388 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.9892    1.3319   -0.7620 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9307   -1.9141   -0.6551 C   0  0  0  0  0  0  0  0  0  0  0  0
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    3.7585    5.7097    0.3199 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0030    5.4229    0.7382 H   0  0  0  0  0  0  0  0  0  0  0  0
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 47 91  1  0
 49 95  1  0
 49 96  1  0
 49 97  1  0
 45 89  1  6
 46 90  1  0
 33 81  1  1
 34 82  1  0
 34 83  1  0
 36 84  1  0
 37 85  1  0
 39 86  1  0
 40 87  1  0
 41 88  1  0
 29 80  1  6
 28 78  1  0
 28 79  1  0
 27 76  1  0
 27 77  1  0
 13 62  1  6
 14 63  1  0
 14 64  1  0
 16 65  1  6
 18 66  1  6
 19 67  1  0
 19 68  1  0
 20 69  1  0
 21 70  1  1
 22 71  1  0
 23 72  1  1
 24 73  1  0
 25 74  1  1
 26 75  1  0
 12 61  1  6
  6 52  1  1
  1 50  1  0
  1 51  1  0
  7 53  1  6
  8 54  1  0
  8 55  1  0
  9 56  1  0
  9 57  1  0
 11 58  1  0
 11 59  1  0
 11 60  1  0
M  END


  Mrv1652309092219382D          

 49 53  0  0  1  0            999 V2000
    0.4179   -4.3735    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0969   -3.6134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7066   -3.4264    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3302   -3.9664    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7770   -2.6044    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0169   -2.2834    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.5231   -2.9071    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3333   -2.7512    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6033   -1.9716    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0632   -1.3480    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8734   -1.1921    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2531   -1.5039    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2870   -0.8802    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0971   -1.0361    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6372   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3672    0.3671    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.5570    0.5230    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2870    1.3025    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.5231    1.4584    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7932    2.2380    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8271    1.9262    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.5570    2.7057    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6372    1.7702    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.1773    2.3939    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9073    0.9907    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7174    0.8348    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0169   -0.1007    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7932    0.0552    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3333   -0.5684    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4135    0.3671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8734    0.9907    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2236    0.5230    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4936    1.3025    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9535    1.9262    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    1.7702    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6033    2.3939    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8734    3.1734    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3333    3.7971    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6835    3.3293    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2236    2.7057    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7637   -0.1007    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.5738    0.0552    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8439    0.8348    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.1139   -0.5684    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8439   -1.3480    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9240   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1941    0.3671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4641   -1.0361    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  6  5  1  6  0  0  0
  6  7  1  0  0  0  0
  7  2  1  1  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  1  0  0  0
 10 12  1  0  0  0  0
 12  6  1  1  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  1  0  0  0  0
 16 15  1  1  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  1  0  0  0
 19 20  1  0  0  0  0
 18 21  1  0  0  0  0
 21 22  1  6  0  0  0
 21 23  1  0  0  0  0
 23 24  1  1  0  0  0
 23 25  1  0  0  0  0
 16 25  1  0  0  0  0
 25 26  1  6  0  0  0
 13 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 10 29  1  0  0  0  0
 29 30  1  1  0  0  0
 30 31  1  0  0  0  0
 31 32  2  0  0  0  0
 31 33  1  0  0  0  0
 33 34  1  0  0  0  0
 34 35  1  0  0  0  0
 35 36  2  0  0  0  0
 36 37  1  0  0  0  0
 37 38  2  0  0  0  0
 38 39  1  0  0  0  0
 38 40  1  0  0  0  0
 40 41  2  0  0  0  0
 35 41  1  0  0  0  0
 33 42  1  0  0  0  0
 42 43  1  0  0  0  0
 43 44  2  0  0  0  0
 43 45  1  0  0  0  0
 45 46  1  0  0  0  0
 45 47  1  0  0  0  0
 47 48  1  0  0  0  0
 47 49  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0288083

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(C)C(O)C(=O)OC(CC1=CC=C(O)C=C1)C(=O)O[C@@H]1CCC(CO[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)[C@@H]2[C@H]3OC(=O)C(=C)[C@@H]3CC[C@@]12C

> <INCHI_IDENTIFIER>
InChI=1S/C35H48O14/c1-16(2)26(38)33(44)46-22(13-18-5-8-20(37)9-6-18)32(43)48-24-10-7-19(15-45-34-29(41)28(40)27(39)23(14-36)47-34)25-30-21(11-12-35(24,25)4)17(3)31(42)49-30/h5-6,8-9,16,19,21-30,34,36-41H,3,7,10-15H2,1-2,4H3/t19?,21-,22?,23+,24+,25+,26?,27+,28-,29+,30-,34+,35-/m0/s1

> <INCHI_KEY>
ABYDABCUCPIFTB-RMYSOGOWSA-N

> <FORMULA>
C35H48O14

> <MOLECULAR_WEIGHT>
692.755

> <EXACT_MASS>
692.304406226

> <JCHEM_ACCEPTOR_COUNT>
11

> <JCHEM_ATOM_COUNT>
97

> <JCHEM_AVERAGE_POLARIZABILITY>
71.69791981864928

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
6

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
1-{[(3aS,5aR,6R,9aS,9bS)-5a-methyl-3-methylidene-2-oxo-9-({[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)-dodecahydronaphtho[1,2-b]furan-6-yl]oxy}-3-(4-hydroxyphenyl)-1-oxopropan-2-yl 2-hydroxy-3-methylbutanoate

> <JCHEM_LOGP>
2.0487427443333326

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
12.027016376710511

> <JCHEM_PKA_STRONGEST_ACIDIC>
9.501765002620923

> <JCHEM_PKA_STRONGEST_BASIC>
-2.9810834118053284

> <JCHEM_POLAR_SURFACE_AREA>
218.73999999999998

> <JCHEM_REFRACTIVITY>
168.41410000000008

> <JCHEM_ROTATABLE_BOND_COUNT>
13

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
1-{[(3aS,5aR,6R,9aS,9bS)-5a-methyl-3-methylidene-2-oxo-9-({[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)-octahydro-3aH-naphtho[1,2-b]furan-6-yl]oxy}-3-(4-hydroxyphenyl)-1-oxopropan-2-yl 2-hydroxy-3-methylbutanoate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 09-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   09-SEP-22         0                                  
HETATM    1  C   UNK     0       0.780  -8.164   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       0.181  -6.745   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -1.319  -6.396   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0      -2.483  -7.404   0.000  0.00  0.00           O+0
HETATM    5  O   UNK     0      -1.450  -4.861   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0      -0.032  -4.262   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       0.977  -5.427   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       2.489  -5.135   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       2.993  -3.680   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       1.985  -2.516   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       3.497  -2.225   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       0.472  -2.807   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      -0.536  -1.643   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      -2.048  -1.934   0.000  0.00  0.00           C+0
HETATM   15  O   UNK     0      -3.056  -0.770   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0      -2.552   0.685   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0      -1.040   0.976   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0      -0.536   2.431   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       0.977   2.722   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0       1.481   4.178   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0      -1.544   3.595   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0      -1.040   5.051   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0      -3.056   3.304   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0      -4.064   4.469   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0      -3.560   1.849   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0      -5.072   1.558   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0      -0.032  -0.188   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       1.481   0.103   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       2.489  -1.061   0.000  0.00  0.00           C+0
HETATM   30  O   UNK     0       4.001  -0.770   0.000  0.00  0.00           O+0
HETATM   31  C   UNK     0       4.505   0.685   0.000  0.00  0.00           C+0
HETATM   32  O   UNK     0       3.497   1.849   0.000  0.00  0.00           O+0
HETATM   33  C   UNK     0       6.017   0.976   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0       6.521   2.431   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0       5.513   3.595   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0       4.001   3.304   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0       2.993   4.469   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0       3.497   5.924   0.000  0.00  0.00           C+0
HETATM   39  O   UNK     0       2.489   7.088   0.000  0.00  0.00           O+0
HETATM   40  C   UNK     0       5.009   6.215   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0       6.017   5.051   0.000  0.00  0.00           C+0
HETATM   42  O   UNK     0       7.026  -0.188   0.000  0.00  0.00           O+0
HETATM   43  C   UNK     0       8.538   0.103   0.000  0.00  0.00           C+0
HETATM   44  O   UNK     0       9.042   1.558   0.000  0.00  0.00           O+0
HETATM   45  C   UNK     0       9.546  -1.061   0.000  0.00  0.00           C+0
HETATM   46  O   UNK     0       9.042  -2.516   0.000  0.00  0.00           O+0
HETATM   47  C   UNK     0      11.058  -0.770   0.000  0.00  0.00           C+0
HETATM   48  C   UNK     0      11.562   0.685   0.000  0.00  0.00           C+0
HETATM   49  C   UNK     0      12.066  -1.934   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3    7                                                  
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6                                                       
CONECT    6    5    7   12                                                  
CONECT    7    6    2    8                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11   12   29                                             
CONECT   11   10                                                            
CONECT   12   10    6   13                                                  
CONECT   13   12   14   27                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17   25                                                  
CONECT   17   16   18                                                       
CONECT   18   17   19   21                                                  
CONECT   19   18   20                                                       
CONECT   20   19                                                            
CONECT   21   18   22   23                                                  
CONECT   22   21                                                            
CONECT   23   21   24   25                                                  
CONECT   24   23                                                            
CONECT   25   23   16   26                                                  
CONECT   26   25                                                            
CONECT   27   13   28                                                       
CONECT   28   27   29                                                       
CONECT   29   28   10   30                                                  
CONECT   30   29   31                                                       
CONECT   31   30   32   33                                                  
CONECT   32   31                                                            
CONECT   33   31   34   42                                                  
CONECT   34   33   35                                                       
CONECT   35   34   36   41                                                  
CONECT   36   35   37                                                       
CONECT   37   36   38                                                       
CONECT   38   37   39   40                                                  
CONECT   39   38                                                            
CONECT   40   38   41                                                       
CONECT   41   40   35                                                       
CONECT   42   33   43                                                       
CONECT   43   42   44   45                                                  
CONECT   44   43                                                            
CONECT   45   43   46   47                                                  
CONECT   46   45                                                            
CONECT   47   45   48   49                                                  
CONECT   48   47                                                            
CONECT   49   47                                                            
MASTER        0    0    0    0    0    0    0    0   49    0  106    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₅H₄₈O₁₄

Average Mass

692.7550 Da

Monoisotopic Mass

692.30441 Da

IUPAC Name

1-{[(3aS,5aR,6R,9aS,9bS)-5a-methyl-3-methylidene-2-oxo-9-({[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)-dodecahydronaphtho[1,2-b]furan-6-yl]oxy}-3-(4-hydroxyphenyl)-1-oxopropan-2-yl 2-hydroxy-3-methylbutanoate

Traditional Name

1-{[(3aS,5aR,6R,9aS,9bS)-5a-methyl-3-methylidene-2-oxo-9-({[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)-octahydro-3aH-naphtho[1,2-b]furan-6-yl]oxy}-3-(4-hydroxyphenyl)-1-oxopropan-2-yl 2-hydroxy-3-methylbutanoate

CAS Registry Number

Not Available

SMILES

CC(C)C(O)C(=O)OC(CC1=CC=C(O)C=C1)C(=O)O[C@@H]1CCC(CO[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)[C@@H]2[C@H]3OC(=O)C(=C)[C@@H]3CC[C@@]12C

InChI Identifier

InChI=1S/C35H48O14/c1-16(2)26(38)33(44)46-22(13-18-5-8-20(37)9-6-18)32(43)48-24-10-7-19(15-45-34-29(41)28(40)27(39)23(14-36)47-34)25-30-21(11-12-35(24,25)4)17(3)31(42)49-30/h5-6,8-9,16,19,21-30,34,36-41H,3,7,10-15H2,1-2,4H3/t19?,21-,22?,23+,24+,25+,26?,27+,28-,29+,30-,34+,35-/m0/s1

InChI Key

ABYDABCUCPIFTB-RMYSOGOWSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Ixeris repens	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as glycodepsipeptides. Glycodepsipeptides are compounds in which a carbohydrate component is linked to a depsipeptide component.

Kingdom

Organic compounds

Super Class

Organic acids and derivatives

Class

Peptidomimetics

Sub Class

Depsipeptides

Direct Parent

Glycodepsipeptides

Alternative Parents

Substituents

Glycodepsipeptide
Terpene glycoside
Eudesmanolide
Terpene lactone
Sesquiterpenoid
Naphthofuran
Hexose monosaccharide
O-glycosyl compound
Glycosyl compound
Tricarboxylic acid or derivatives
1-hydroxy-2-unsubstituted benzenoid
Phenol
Fatty acid ester
Fatty acyl
Benzenoid
Oxane
Monosaccharide
Gamma butyrolactone
Monocyclic benzene moiety
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Tetrahydrofuran
Secondary alcohol
Lactone
Carboxylic acid ester
Oxacycle
Organoheterocyclic compound
Polyol
Carboxylic acid derivative
Acetal
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Primary alcohol
Organooxygen compound
Carbonyl group
Alcohol
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.05	ChemAxon
pKa (Strongest Acidic)	9.5	ChemAxon
pKa (Strongest Basic)	-3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	11	ChemAxon
Hydrogen Donor Count	6	ChemAxon
Polar Surface Area	218.74 Å²	ChemAxon
Rotatable Bond Count	13	ChemAxon
Refractivity	168.41 m³·mol⁻¹	ChemAxon
Polarizability	71.7 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00033983

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

101589325

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 1-{[(3as,5ar,6r,9as,9bs)-5a-methyl-3-methylidene-2-oxo-9-({[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)-octahydro-3ah-naphtho[1,2-b]furan-6-yl]oxy}-3-(4-hydroxyphenyl)-1-oxopropan-2-yl 2-hydroxy-3-methylbutanoate (NP0288083)

MOL for NP0288083 (1-{[(3as,5ar,6r,9as,9bs)-5a-methyl-3-methylidene-2-oxo-9-({[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)-octahydro-3ah-naphtho[1,2-b]furan-6-yl]oxy}-3-(4-hydroxyphenyl)-1-oxopropan-2-yl 2-hydroxy-3-methylbutanoate)

3D MOL for NP0288083 (1-{[(3as,5ar,6r,9as,9bs)-5a-methyl-3-methylidene-2-oxo-9-({[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)-octahydro-3ah-naphtho[1,2-b]furan-6-yl]oxy}-3-(4-hydroxyphenyl)-1-oxopropan-2-yl 2-hydroxy-3-methylbutanoate)

3D SDF for NP0288083 (1-{[(3as,5ar,6r,9as,9bs)-5a-methyl-3-methylidene-2-oxo-9-({[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)-octahydro-3ah-naphtho[1,2-b]furan-6-yl]oxy}-3-(4-hydroxyphenyl)-1-oxopropan-2-yl 2-hydroxy-3-methylbutanoate)

3D-SDF for NP0288083 (1-{[(3as,5ar,6r,9as,9bs)-5a-methyl-3-methylidene-2-oxo-9-({[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)-octahydro-3ah-naphtho[1,2-b]furan-6-yl]oxy}-3-(4-hydroxyphenyl)-1-oxopropan-2-yl 2-hydroxy-3-methylbutanoate)

PDB for NP0288083 (1-{[(3as,5ar,6r,9as,9bs)-5a-methyl-3-methylidene-2-oxo-9-({[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)-octahydro-3ah-naphtho[1,2-b]furan-6-yl]oxy}-3-(4-hydroxyphenyl)-1-oxopropan-2-yl 2-hydroxy-3-methylbutanoate)

3D PDB for NP0288083 (1-{[(3as,5ar,6r,9as,9bs)-5a-methyl-3-methylidene-2-oxo-9-({[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)-octahydro-3ah-naphtho[1,2-b]furan-6-yl]oxy}-3-(4-hydroxyphenyl)-1-oxopropan-2-yl 2-hydroxy-3-methylbutanoate)

SMILES for NP0288083 (1-{[(3as,5ar,6r,9as,9bs)-5a-methyl-3-methylidene-2-oxo-9-({[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)-octahydro-3ah-naphtho[1,2-b]furan-6-yl]oxy}-3-(4-hydroxyphenyl)-1-oxopropan-2-yl 2-hydroxy-3-methylbutanoate)

INCHI for NP0288083 (1-{[(3as,5ar,6r,9as,9bs)-5a-methyl-3-methylidene-2-oxo-9-({[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)-octahydro-3ah-naphtho[1,2-b]furan-6-yl]oxy}-3-(4-hydroxyphenyl)-1-oxopropan-2-yl 2-hydroxy-3-methylbutanoate)

Structure for NP0288083 (1-{[(3as,5ar,6r,9as,9bs)-5a-methyl-3-methylidene-2-oxo-9-({[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)-octahydro-3ah-naphtho[1,2-b]furan-6-yl]oxy}-3-(4-hydroxyphenyl)-1-oxopropan-2-yl 2-hydroxy-3-methylbutanoate)

3D Structure for NP0288083 (1-{[(3as,5ar,6r,9as,9bs)-5a-methyl-3-methylidene-2-oxo-9-({[(2r,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}methyl)-octahydro-3ah-naphtho[1,2-b]furan-6-yl]oxy}-3-(4-hydroxyphenyl)-1-oxopropan-2-yl 2-hydroxy-3-methylbutanoate)