NP-MRD: Showing NP-Card for (8r)-16-hydroxyhexadecan-8-yl (2e)-3-(3,4-dihydroxyphenyl)prop-2-enoate (NP0287848)

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Record Information

Version

2.0

Created at

2022-09-09 17:17:35 UTC

Updated at

2022-09-09 17:17:36 UTC

NP-MRD ID

NP0287848

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(8r)-16-hydroxyhexadecan-8-yl (2e)-3-(3,4-dihydroxyphenyl)prop-2-enoate

Description

(8R)-16-hydroxyhexadecan-8-yl (2E)-3-(3,4-dihydroxyphenyl)prop-2-enoate belongs to the class of organic compounds known as long-chain fatty alcohols. These are fatty alcohols that have an aliphatic tail of 13 to 21 carbon atoms. (8r)-16-hydroxyhexadecan-8-yl (2e)-3-(3,4-dihydroxyphenyl)prop-2-enoate is found in Cedrus deodara. Based on a literature review very few articles have been published on (8R)-16-hydroxyhexadecan-8-yl (2E)-3-(3,4-dihydroxyphenyl)prop-2-enoate.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309092219172D          

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M  END

     RDKit          3D

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M  END


  Mrv1652309092219172D          

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M  END
> <DATABASE_ID>
NP0287848

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCCCCCC[C@H](CCCCCCCCO)OC(=O)\C=C\C1=CC=C(O)C(O)=C1

> <INCHI_IDENTIFIER>
InChI=1S/C25H40O5/c1-2-3-4-7-10-13-22(14-11-8-5-6-9-12-19-26)30-25(29)18-16-21-15-17-23(27)24(28)20-21/h15-18,20,22,26-28H,2-14,19H2,1H3/b18-16+/t22-/m1/s1

> <INCHI_KEY>
IHWFEFFLDBPLFB-WTYVIMSDSA-N

> <FORMULA>
C25H40O5

> <MOLECULAR_WEIGHT>
420.59

> <EXACT_MASS>
420.287574388

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
70

> <JCHEM_AVERAGE_POLARIZABILITY>
51.212954069201444

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(8R)-16-hydroxyhexadecan-8-yl (2E)-3-(3,4-dihydroxyphenyl)prop-2-enoate

> <JCHEM_LOGP>
7.180187473666666

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
12.612466927543014

> <JCHEM_PKA_STRONGEST_ACIDIC>
9.208621706329813

> <JCHEM_PKA_STRONGEST_BASIC>
-1.992252901670461

> <JCHEM_POLAR_SURFACE_AREA>
86.99000000000001

> <JCHEM_REFRACTIVITY>
122.54589999999997

> <JCHEM_ROTATABLE_BOND_COUNT>
18

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
(8R)-16-hydroxyhexadecan-8-yl (2E)-3-(3,4-dihydroxyphenyl)prop-2-enoate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 09-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   09-SEP-22         0                                  
HETATM    1  C   UNK     0      -1.110 -14.928   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       0.000 -13.860   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -0.370 -12.365   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       0.740 -11.297   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       0.370  -9.802   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       1.480  -8.735   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       1.110  -7.240   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       2.219  -6.172   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       3.699  -6.599   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       4.069  -8.094   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       5.548  -8.521   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       5.918 -10.016   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       7.398 -10.443   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       7.768 -11.938   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       9.247 -12.365   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       9.617 -13.860   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0      11.097 -14.287   0.000  0.00  0.00           O+0
HETATM   18  O   UNK     0       1.849  -4.677   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0       0.370  -4.250   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0      -0.740  -5.318   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0       0.000  -2.755   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -1.480  -2.328   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      -1.849  -0.833   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      -3.329  -0.406   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      -3.699   1.089   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      -2.589   2.157   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0      -2.959   3.652   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0      -1.110   1.730   0.000  0.00  0.00           C+0
HETATM   29  O   UNK     0       0.000   2.798   0.000  0.00  0.00           O+0
HETATM   30  C   UNK     0      -0.740   0.235   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9   18                                                  
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16                                                            
CONECT   18    8   19                                                       
CONECT   19   18   20   21                                                  
CONECT   20   19                                                            
CONECT   21   19   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24   30                                                  
CONECT   24   23   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25   27   28                                                  
CONECT   27   26                                                            
CONECT   28   26   29   30                                                  
CONECT   29   28                                                            
CONECT   30   28   23                                                       
MASTER        0    0    0    0    0    0    0    0   30    0   60    0
END

View in JSmol

Synonyms

Value	Source
(8R)-16-Hydroxyhexadecan-8-yl (2E)-3-(3,4-dihydroxyphenyl)prop-2-enoic acid	Generator

Chemical Formula

C₂₅H₄₀O₅

Average Mass

420.5900 Da

Monoisotopic Mass

420.28757 Da

IUPAC Name

(8R)-16-hydroxyhexadecan-8-yl (2E)-3-(3,4-dihydroxyphenyl)prop-2-enoate

Traditional Name

(8R)-16-hydroxyhexadecan-8-yl (2E)-3-(3,4-dihydroxyphenyl)prop-2-enoate

CAS Registry Number

Not Available

SMILES

CCCCCCC[C@H](CCCCCCCCO)OC(=O)\C=C\C1=CC=C(O)C(O)=C1

InChI Identifier

InChI=1S/C25H40O5/c1-2-3-4-7-10-13-22(14-11-8-5-6-9-12-19-26)30-25(29)18-16-21-15-17-23(27)24(28)20-21/h15-18,20,22,26-28H,2-14,19H2,1H3/b18-16+/t22-/m1/s1

InChI Key

IHWFEFFLDBPLFB-WTYVIMSDSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Cedrus deodara	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as long-chain fatty alcohols. These are fatty alcohols that have an aliphatic tail of 13 to 21 carbon atoms.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Fatty alcohols

Direct Parent

Long-chain fatty alcohols

Alternative Parents

Substituents

Long chain fatty alcohol
Cinnamic acid or derivatives
Coumaric acid or derivatives
Cinnamic acid ester
Fatty alcohol ester
Hydroxycinnamic acid or derivatives
Catechol
Styrene
1-hydroxy-4-unsubstituted benzenoid
1-hydroxy-2-unsubstituted benzenoid
Fatty acid ester
Phenol
Monocyclic benzene moiety
Benzenoid
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Carboxylic acid ester
Carboxylic acid derivative
Monocarboxylic acid or derivatives
Primary alcohol
Alcohol
Hydrocarbon derivative
Organic oxide
Carbonyl group
Organic oxygen compound
Organooxygen compound
Aromatic homomonocyclic compound

Molecular Framework

Aromatic homomonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	7.18	ChemAxon
pKa (Strongest Acidic)	9.21	ChemAxon
pKa (Strongest Basic)	-2	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	86.99 Å²	ChemAxon
Rotatable Bond Count	18	ChemAxon
Refractivity	122.55 m³·mol⁻¹	ChemAxon
Polarizability	51.21 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

163193118

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (8r)-16-hydroxyhexadecan-8-yl (2e)-3-(3,4-dihydroxyphenyl)prop-2-enoate (NP0287848)

MOL for NP0287848 ((8r)-16-hydroxyhexadecan-8-yl (2e)-3-(3,4-dihydroxyphenyl)prop-2-enoate)

3D MOL for NP0287848 ((8r)-16-hydroxyhexadecan-8-yl (2e)-3-(3,4-dihydroxyphenyl)prop-2-enoate)

3D SDF for NP0287848 ((8r)-16-hydroxyhexadecan-8-yl (2e)-3-(3,4-dihydroxyphenyl)prop-2-enoate)

3D-SDF for NP0287848 ((8r)-16-hydroxyhexadecan-8-yl (2e)-3-(3,4-dihydroxyphenyl)prop-2-enoate)

PDB for NP0287848 ((8r)-16-hydroxyhexadecan-8-yl (2e)-3-(3,4-dihydroxyphenyl)prop-2-enoate)

3D PDB for NP0287848 ((8r)-16-hydroxyhexadecan-8-yl (2e)-3-(3,4-dihydroxyphenyl)prop-2-enoate)

SMILES for NP0287848 ((8r)-16-hydroxyhexadecan-8-yl (2e)-3-(3,4-dihydroxyphenyl)prop-2-enoate)

INCHI for NP0287848 ((8r)-16-hydroxyhexadecan-8-yl (2e)-3-(3,4-dihydroxyphenyl)prop-2-enoate)

Structure for NP0287848 ((8r)-16-hydroxyhexadecan-8-yl (2e)-3-(3,4-dihydroxyphenyl)prop-2-enoate)

3D Structure for NP0287848 ((8r)-16-hydroxyhexadecan-8-yl (2e)-3-(3,4-dihydroxyphenyl)prop-2-enoate)