NP-MRD: Showing NP-Card for (9s,10s)-14,16,16-tribromo-9,10-dihydroxyhexadeca-7,13,15-trien-5-ynoic acid (NP0285764)

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Record Information

Version

2.0

Created at

2022-09-09 14:04:27 UTC

Updated at

2022-09-09 14:04:27 UTC

NP-MRD ID

NP0285764

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(9s,10s)-14,16,16-tribromo-9,10-dihydroxyhexadeca-7,13,15-trien-5-ynoic acid

Description

(9S,10S)-14,16,16-tribromo-9,10-dihydroxyhexadeca-7,13,15-trien-5-ynoic acid belongs to the class of organic compounds known as long-chain fatty acids. These are fatty acids with an aliphatic tail that contains between 13 and 21 carbon atoms. (9s,10s)-14,16,16-tribromo-9,10-dihydroxyhexadeca-7,13,15-trien-5-ynoic acid is found in Xestospongia testudinaria. Based on a literature review very few articles have been published on (9S,10S)-14,16,16-tribromo-9,10-dihydroxyhexadeca-7,13,15-trien-5-ynoic acid.

Structure

MOL SDF PDB SMILES InChI


  Mrv1652309092216042D          

 23 22  0  0  1  0            999 V2000
   -5.9072   -0.1105    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1927    0.3020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1927    1.1270    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4783   -0.1105    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7638    0.3020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0493   -0.1105    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3349    0.3020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6204    0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9059    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1914    0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5230    1.1270    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.5230    1.9520    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2375    0.7145    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.2375   -0.1105    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9520    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6664    0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3809    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0954    0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0954   -0.1105    0.0000 Br  0  0  0  0  0  0  0  0  0  0  0  0
    4.8099    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5243    0.7145    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2388    1.1270    0.0000 Br  0  0  0  0  0  0  0  0  0  0  0  0
    5.5243   -0.1105    0.0000 Br  0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  2  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  3  0  0  0  0
  9  8  1  4  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  6  0  0  0
 11 13  1  0  0  0  0
 13 14  1  6  0  0  0
 13 15  1  0  0  0  0
 15 16  1  0  0  0  0
 17 16  1  4  0  0  0
 17 18  2  0  0  0  0
 18 19  1  0  0  0  0
 18 20  1  0  0  0  0
 20 21  2  0  0  0  0
 21 22  1  0  0  0  0
 21 23  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0285764

> <DATABASE_NAME>
NP-MRD

> <SMILES>
O[C@@H](CCC=C(Br)C=C(Br)Br)[C@@H](O)C=CC#CCCCC(O)=O

> <INCHI_IDENTIFIER>
InChI=1S/C16H19Br3O4/c17-12(11-15(18)19)7-6-9-14(21)13(20)8-4-2-1-3-5-10-16(22)23/h4,7-8,11,13-14,20-21H,3,5-6,9-10H2,(H,22,23)/t13-,14-/m0/s1

> <INCHI_KEY>
LPFSGZGTAGPTBH-KBPBESRZSA-N

> <FORMULA>
C16H19Br3O4

> <MOLECULAR_WEIGHT>
515.036

> <EXACT_MASS>
511.883348

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
42

> <JCHEM_AVERAGE_POLARIZABILITY>
41.80104310116309

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(9S,10S)-14,16,16-tribromo-9,10-dihydroxyhexadeca-7,13,15-trien-5-ynoic acid

> <JCHEM_LOGP>
3.963648475666666

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
13.631766147511293

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.095094442729017

> <JCHEM_PKA_STRONGEST_BASIC>
-3.1749999247185823

> <JCHEM_POLAR_SURFACE_AREA>
77.76

> <JCHEM_REFRACTIVITY>
114.73090000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
11

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
(9S,10S)-14,16,16-tribromo-9,10-dihydroxyhexadeca-7,13,15-trien-5-ynoic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 09-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   09-SEP-22         0                                  
HETATM    1  O   UNK     0     -11.027  -0.206   0.000  0.00  0.00           O+0
HETATM    2  C   UNK     0      -9.693   0.564   0.000  0.00  0.00           C+0
HETATM    3  O   UNK     0      -9.693   2.104   0.000  0.00  0.00           O+0
HETATM    4  C   UNK     0      -8.359  -0.206   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -7.026   0.564   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -5.692  -0.206   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -4.358   0.564   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -3.025   1.334   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -1.691   2.104   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -0.357   1.334   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       0.976   2.104   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0       0.976   3.644   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0       2.310   1.334   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0       2.310  -0.206   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0       3.644   2.104   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       4.977   1.334   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       6.311   2.104   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       7.645   1.334   0.000  0.00  0.00           C+0
HETATM   19 Br   UNK     0       7.645  -0.206   0.000  0.00  0.00          Br+0
HETATM   20  C   UNK     0       8.978   2.104   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      10.312   1.334   0.000  0.00  0.00           C+0
HETATM   22 Br   UNK     0      11.646   2.104   0.000  0.00  0.00          Br+0
HETATM   23 Br   UNK     0      10.312  -0.206   0.000  0.00  0.00          Br+0
CONECT    1    2                                                            
CONECT    2    1    3    4                                                  
CONECT    3    2                                                            
CONECT    4    2    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12   13                                                  
CONECT   12   11                                                            
CONECT   13   11   14   15                                                  
CONECT   14   13                                                            
CONECT   15   13   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18   21                                                       
CONECT   21   20   22   23                                                  
CONECT   22   21                                                            
CONECT   23   21                                                            
MASTER        0    0    0    0    0    0    0    0   23    0   44    0
END

View in JSmol

Synonyms

Value	Source
(9S,10S)-14,16,16-Tribromo-9,10-dihydroxyhexadeca-7,13,15-trien-5-ynoate	Generator

Chemical Formula

C₁₆H₁₉Br₃O₄

Average Mass

515.0360 Da

Monoisotopic Mass

511.88335 Da

IUPAC Name

(9S,10S)-14,16,16-tribromo-9,10-dihydroxyhexadeca-7,13,15-trien-5-ynoic acid

Traditional Name

(9S,10S)-14,16,16-tribromo-9,10-dihydroxyhexadeca-7,13,15-trien-5-ynoic acid

CAS Registry Number

Not Available

SMILES

O[C@@H](CCC=C(Br)C=C(Br)Br)[C@@H](O)C=CC#CCCCC(O)=O

InChI Identifier

InChI=1S/C16H19Br3O4/c17-12(11-15(18)19)7-6-9-14(21)13(20)8-4-2-1-3-5-10-16(22)23/h4,7-8,11,13-14,20-21H,3,5-6,9-10H2,(H,22,23)/t13-,14-/m0/s1

InChI Key

LPFSGZGTAGPTBH-KBPBESRZSA-N

Experimental Spectra

Not Available

Predicted Spectra

Not Available

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Xestospongia testudinaria	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as long-chain fatty acids. These are fatty acids with an aliphatic tail that contains between 13 and 21 carbon atoms.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Fatty acids and conjugates

Direct Parent

Long-chain fatty acids

Alternative Parents

Substituents

Long-chain fatty acid
Hydroxy fatty acid
Halogenated fatty acid
Unsaturated fatty acid
Secondary alcohol
Ketene acetal or derivatives
1,2-diol
Bromoalkene
Haloalkene
Vinyl halide
Vinyl bromide
Monocarboxylic acid or derivatives
Carboxylic acid
Carboxylic acid derivative
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Organobromide
Organohalogen compound
Carbonyl group
Alcohol
Aliphatic acyclic compound

Molecular Framework

Aliphatic acyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.96	ChemAxon
pKa (Strongest Acidic)	4.1	ChemAxon
pKa (Strongest Basic)	-3.2	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	77.76 Å²	ChemAxon
Rotatable Bond Count	11	ChemAxon
Refractivity	114.73 m³·mol⁻¹	ChemAxon
Polarizability	41.8 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

162868376

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (9s,10s)-14,16,16-tribromo-9,10-dihydroxyhexadeca-7,13,15-trien-5-ynoic acid (NP0285764)

MOL for NP0285764 ((9s,10s)-14,16,16-tribromo-9,10-dihydroxyhexadeca-7,13,15-trien-5-ynoic acid)

3D MOL for NP0285764 ((9s,10s)-14,16,16-tribromo-9,10-dihydroxyhexadeca-7,13,15-trien-5-ynoic acid)

3D SDF for NP0285764 ((9s,10s)-14,16,16-tribromo-9,10-dihydroxyhexadeca-7,13,15-trien-5-ynoic acid)

3D-SDF for NP0285764 ((9s,10s)-14,16,16-tribromo-9,10-dihydroxyhexadeca-7,13,15-trien-5-ynoic acid)

PDB for NP0285764 ((9s,10s)-14,16,16-tribromo-9,10-dihydroxyhexadeca-7,13,15-trien-5-ynoic acid)

3D PDB for NP0285764 ((9s,10s)-14,16,16-tribromo-9,10-dihydroxyhexadeca-7,13,15-trien-5-ynoic acid)

SMILES for NP0285764 ((9s,10s)-14,16,16-tribromo-9,10-dihydroxyhexadeca-7,13,15-trien-5-ynoic acid)

INCHI for NP0285764 ((9s,10s)-14,16,16-tribromo-9,10-dihydroxyhexadeca-7,13,15-trien-5-ynoic acid)

Structure for NP0285764 ((9s,10s)-14,16,16-tribromo-9,10-dihydroxyhexadeca-7,13,15-trien-5-ynoic acid)

3D Structure for NP0285764 ((9s,10s)-14,16,16-tribromo-9,10-dihydroxyhexadeca-7,13,15-trien-5-ynoic acid)