NP-MRD: Showing NP-Card for 1-(5,6-dimethylheptan-2-yl)-7-methoxy-9a,11a-dimethyl-1h,2h,3h,3ah,4h,5h,5ah,6h,7h,8h,9h,10h,11h-cyclopenta[a]phenanthrene (NP0285522)

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Record Information

Version

2.0

Created at

2022-09-09 13:43:44 UTC

Updated at

2022-09-09 13:43:45 UTC

NP-MRD ID

NP0285522

Secondary Accession Numbers

None

Natural Product Identification

Common Name

1-(5,6-dimethylheptan-2-yl)-7-methoxy-9a,11a-dimethyl-1h,2h,3h,3ah,4h,5h,5ah,6h,7h,8h,9h,10h,11h-cyclopenta[a]phenanthrene

Description

14-(5,6-Dimethylheptan-2-yl)-5-methoxy-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]Heptadec-1(10)-ene belongs to the class of organic compounds known as ergostane steroids. These are steroids with a structure based on the ergostane skeleton, which arises from the methylation of cholestane at the 24-position. 14-(5,6-Dimethylheptan-2-yl)-5-methoxy-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]Heptadec-1(10)-ene is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004201506532D          

 30 33  0  0  0  0            999 V2000
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M  END

     RDKit          3D

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  Mrv1533004201506532D          

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  3 30  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0285522

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1CCC2(C)C(CCC3=C2CCC2(C)C(CCC32)C(C)CCC(C)C(C)C)C1

> <INCHI_IDENTIFIER>
InChI=1S/C29H50O/c1-19(2)20(3)8-9-21(4)25-12-13-26-24-11-10-22-18-23(30-7)14-16-28(22,5)27(24)15-17-29(25,26)6/h19-23,25-26H,8-18H2,1-7H3

> <INCHI_KEY>
ZBNICHMFKCQMIT-UHFFFAOYSA-N

> <FORMULA>
C29H50O

> <MOLECULAR_WEIGHT>
414.718

> <EXACT_MASS>
414.38616623

> <JCHEM_ACCEPTOR_COUNT>
1

> <JCHEM_ATOM_COUNT>
80

> <JCHEM_AVERAGE_POLARIZABILITY>
53.88187888776091

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
14-(5,6-dimethylheptan-2-yl)-5-methoxy-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-1(10)-ene

> <ALOGPS_LOGP>
7.72

> <JCHEM_LOGP>
7.999376805999999

> <ALOGPS_LOGS>
-7.32

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-4.122672764651533

> <JCHEM_POLAR_SURFACE_AREA>
9.23

> <JCHEM_REFRACTIVITY>
129.64969999999997

> <JCHEM_ROTATABLE_BOND_COUNT>
6

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.96e-05 g/l

> <JCHEM_TRADITIONAL_IUPAC>
14-(5,6-dimethylheptan-2-yl)-5-methoxy-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-1(10)-ene

> <JCHEM_VEBER_RULE>
1

$$$$

HEADER    PROTEIN                                 20-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   20-APR-15         0                                  
HETATM    1  C   UNK     0      -1.248  14.890   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       0.258  14.570   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       0.734  13.105   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       2.240  12.785   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       2.716  11.320   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       1.686  10.176   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       3.192   9.856   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       0.179  10.496   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -0.851   9.352   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -0.375   7.887   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       1.131   7.567   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       2.161   8.711   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       3.668   8.391   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       4.144   6.927   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       3.113   5.782   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       4.578   5.306   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       3.274   4.251   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       1.867   3.624   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       0.837   4.769   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       1.607   6.102   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       4.608   3.481   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       4.608   1.941   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       5.942   4.251   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       7.275   3.481   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       8.609   4.251   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       8.609   5.791   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       9.943   3.481   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      11.276   4.251   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       9.943   1.941   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      -0.297  11.961   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   30                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7    8   12                                             
CONECT    7    6                                                            
CONECT    8    6    9   30                                                  
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12   20                                                  
CONECT   12   11    6   13                                                  
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16   17   20                                             
CONECT   16   15                                                            
CONECT   17   15   18   21                                                  
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   11   15                                                  
CONECT   21   17   22   23                                                  
CONECT   22   21                                                            
CONECT   23   21   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   26   27                                                  
CONECT   26   25                                                            
CONECT   27   25   28   29                                                  
CONECT   28   27                                                            
CONECT   29   27                                                            
CONECT   30    8    3                                                       
MASTER        0    0    0    0    0    0    0    0   30    0   66    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₉H₅₀O

Average Mass

414.7180 Da

Monoisotopic Mass

414.38617 Da

IUPAC Name

14-(5,6-dimethylheptan-2-yl)-5-methoxy-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-1(10)-ene

Traditional Name

14-(5,6-dimethylheptan-2-yl)-5-methoxy-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-1(10)-ene

CAS Registry Number

Not Available

SMILES

COC1CCC2(C)C(CCC3=C2CCC2(C)C(CCC32)C(C)CCC(C)C(C)C)C1

InChI Identifier

InChI=1S/C29H50O/c1-19(2)20(3)8-9-21(4)25-12-13-26-24-11-10-22-18-23(30-7)14-16-28(22,5)27(24)15-17-29(25,26)6/h19-23,25-26H,8-18H2,1-7H3

InChI Key

ZBNICHMFKCQMIT-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as ergostane steroids. These are steroids with a structure based on the ergostane skeleton, which arises from the methylation of cholestane at the 24-position.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Steroids and steroid derivatives

Sub Class

Ergostane steroids

Direct Parent

Ergostane steroids

Alternative Parents

Substituents

Ergostane-skeleton
Ether
Dialkyl ether
Organic oxygen compound
Hydrocarbon derivative
Organooxygen compound
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	7.72	ALOGPS
logP	8	ChemAxon
logS	-7.3	ALOGPS
pKa (Strongest Basic)	-4.1	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	1	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	9.23 Å²	ChemAxon
Rotatable Bond Count	6	ChemAxon
Refractivity	129.65 m³·mol⁻¹	ChemAxon
Polarizability	53.88 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	Yes	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

74052200

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 1-(5,6-dimethylheptan-2-yl)-7-methoxy-9a,11a-dimethyl-1h,2h,3h,3ah,4h,5h,5ah,6h,7h,8h,9h,10h,11h-cyclopenta[a]phenanthrene (NP0285522)

MOL for NP0285522 (1-(5,6-dimethylheptan-2-yl)-7-methoxy-9a,11a-dimethyl-1h,2h,3h,3ah,4h,5h,5ah,6h,7h,8h,9h,10h,11h-cyclopenta[a]phenanthrene)

3D MOL for NP0285522 (1-(5,6-dimethylheptan-2-yl)-7-methoxy-9a,11a-dimethyl-1h,2h,3h,3ah,4h,5h,5ah,6h,7h,8h,9h,10h,11h-cyclopenta[a]phenanthrene)

3D SDF for NP0285522 (1-(5,6-dimethylheptan-2-yl)-7-methoxy-9a,11a-dimethyl-1h,2h,3h,3ah,4h,5h,5ah,6h,7h,8h,9h,10h,11h-cyclopenta[a]phenanthrene)

3D-SDF for NP0285522 (1-(5,6-dimethylheptan-2-yl)-7-methoxy-9a,11a-dimethyl-1h,2h,3h,3ah,4h,5h,5ah,6h,7h,8h,9h,10h,11h-cyclopenta[a]phenanthrene)

PDB for NP0285522 (1-(5,6-dimethylheptan-2-yl)-7-methoxy-9a,11a-dimethyl-1h,2h,3h,3ah,4h,5h,5ah,6h,7h,8h,9h,10h,11h-cyclopenta[a]phenanthrene)

3D PDB for NP0285522 (1-(5,6-dimethylheptan-2-yl)-7-methoxy-9a,11a-dimethyl-1h,2h,3h,3ah,4h,5h,5ah,6h,7h,8h,9h,10h,11h-cyclopenta[a]phenanthrene)

SMILES for NP0285522 (1-(5,6-dimethylheptan-2-yl)-7-methoxy-9a,11a-dimethyl-1h,2h,3h,3ah,4h,5h,5ah,6h,7h,8h,9h,10h,11h-cyclopenta[a]phenanthrene)

INCHI for NP0285522 (1-(5,6-dimethylheptan-2-yl)-7-methoxy-9a,11a-dimethyl-1h,2h,3h,3ah,4h,5h,5ah,6h,7h,8h,9h,10h,11h-cyclopenta[a]phenanthrene)

Structure for NP0285522 (1-(5,6-dimethylheptan-2-yl)-7-methoxy-9a,11a-dimethyl-1h,2h,3h,3ah,4h,5h,5ah,6h,7h,8h,9h,10h,11h-cyclopenta[a]phenanthrene)

3D Structure for NP0285522 (1-(5,6-dimethylheptan-2-yl)-7-methoxy-9a,11a-dimethyl-1h,2h,3h,3ah,4h,5h,5ah,6h,7h,8h,9h,10h,11h-cyclopenta[a]phenanthrene)