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Showing NP-Card for 4-oxohex-5-en-1-yl acetate (NP0284957)

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Record Information
Version2.0
Created at2022-09-09 12:54:18 UTC
Updated at2022-09-09 12:54:18 UTC
NP-MRD IDNP0284957
Secondary Accession NumbersNone
Natural Product Identification
Common Name4-oxohex-5-en-1-yl acetate
Description4-Oxohex-5-enyl acetate belongs to the class of organic compounds known as enones. Enones are compounds containing the enone functional group, with the structure RC(=O)CR'. 4-oxohex-5-en-1-yl acetate is found in Craterellus cornucopioides. It was first documented in 2022 (PMID: 36113821). Based on a literature review a significant number of articles have been published on 4-Oxohex-5-enyl acetate (PMID: 36108705) (PMID: 36108433) (PMID: 36108381) (PMID: 36112687) (PMID: 36113697) (PMID: 36112767).
Structure
Thumb
MOL3D MOLSDFPDBSMILESInChI

MOL for NP0284957 (4-oxohex-5-en-1-yl acetate)


  Mrv1652309092214542D          

 11 10  0  0  0  0            999 V2000
    2.9980    2.5559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7125    2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4270    2.5559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4270    3.3809    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.1414    2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8559    2.5559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5704    2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2849    2.5559    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.9993    2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7138    2.5559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9993    1.3184    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
  9 11  2  0  0  0  0
M  END
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3D MOL for NP0284957 (4-oxohex-5-en-1-yl acetate)

     RDKit          3D

 23 22  0  0  0  0  0  0  0  0999 V2000
   -4.1376    0.8888   -1.0950 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4650    0.1707   -0.2175 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1357   -0.3633   -0.5373 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6608   -0.1267   -1.6445 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4390   -1.1517    0.4749 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1463   -0.5561    0.9407 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8141   -0.4343   -0.2062 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0456    0.0982    0.3021 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.1476    0.3363   -0.4714 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4313    0.8844    0.0356 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0875    0.0769   -1.7083 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1062    1.2629   -0.8275 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7567    1.1187   -2.0761 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9220   -0.0198    0.7593 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0744   -1.3184    1.3853 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2897   -2.1984    0.0852 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3509    0.4526    1.4042 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3112   -1.1782    1.7549 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9399   -1.4359   -0.6556 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4056    0.2391   -0.9675 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7722    1.7030   -0.6621 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2352    0.1444    0.0470 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.2941    1.4069    1.0179 H   0  0  0  0  0  0  0  0  0  0  0  0
 10  9  1  0
  9 11  2  0
  9  8  1  0
  8  7  1  0
  7  6  1  0
  6  5  1  0
  5  3  1  0
  3  4  2  0
  3  2  1  0
  2  1  2  3
 10 21  1  0
 10 22  1  0
 10 23  1  0
  7 19  1  0
  7 20  1  0
  6 17  1  0
  6 18  1  0
  5 15  1  0
  5 16  1  0
  2 14  1  0
  1 12  1  0
  1 13  1  0
M  END
Download

3D SDF for NP0284957 (4-oxohex-5-en-1-yl acetate)


  Mrv1652309092214542D          

 11 10  0  0  0  0            999 V2000
    2.9980    2.5559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7125    2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4270    2.5559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4270    3.3809    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.1414    2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8559    2.5559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5704    2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2849    2.5559    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.9993    2.1434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7138    2.5559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9993    1.3184    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
  9 11  2  0  0  0  0
M  END
> <DATABASE_ID>
NP0284957

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(=O)OCCCC(=O)C=C

> <INCHI_IDENTIFIER>
InChI=1S/C8H12O3/c1-3-8(10)5-4-6-11-7(2)9/h3H,1,4-6H2,2H3

> <INCHI_KEY>
RXRUTODEGWRIMM-UHFFFAOYSA-N

> <FORMULA>
C8H12O3

> <MOLECULAR_WEIGHT>
156.181

> <EXACT_MASS>
156.078644246

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
23

> <JCHEM_AVERAGE_POLARIZABILITY>
16.695971506007083

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
4-oxohex-5-en-1-yl acetate

> <JCHEM_LOGP>
1.0121241210000003

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
19.458418455928744

> <JCHEM_PKA_STRONGEST_BASIC>
-4.746956544816687

> <JCHEM_POLAR_SURFACE_AREA>
43.370000000000005

> <JCHEM_REFRACTIVITY>
41.150600000000004

> <JCHEM_ROTATABLE_BOND_COUNT>
6

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
4-oxohex-5-en-1-yl acetate

> <JCHEM_VEBER_RULE>
0

$$$$
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3D-SDF for NP0284957 (4-oxohex-5-en-1-yl acetate)

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PDB for NP0284957 (4-oxohex-5-en-1-yl acetate)
HEADER    PROTEIN                                 09-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   09-SEP-22         0                                  
HETATM    1  C   UNK     0       5.596   4.771   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       6.930   4.001   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       8.264   4.771   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0       8.264   6.311   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       9.597   4.001   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      10.931   4.771   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      12.265   4.001   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0      13.598   4.771   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0      14.932   4.001   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      16.266   4.771   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0      14.932   2.461   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10   11                                                  
CONECT   10    9                                                            
CONECT   11    9                                                            
MASTER        0    0    0    0    0    0    0    0   11    0   20    0
END

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3D PDB for NP0284957 (4-oxohex-5-en-1-yl acetate)
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SMILES for NP0284957 (4-oxohex-5-en-1-yl acetate)
CC(=O)OCCCC(=O)C=C
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INCHI for NP0284957 (4-oxohex-5-en-1-yl acetate)
InChI=1S/C8H12O3/c1-3-8(10)5-4-6-11-7(2)9/h3H,1,4-6H2,2H3
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Synonyms
ValueSource
4-Oxohex-5-enyl acetic acidGenerator
Chemical FormulaC8H12O3
Average Mass156.1810 Da
Monoisotopic Mass156.07864 Da
IUPAC Name4-oxohex-5-en-1-yl acetate
Traditional Name4-oxohex-5-en-1-yl acetate
CAS Registry NumberNot Available
SMILES
CC(=O)OCCCC(=O)C=C
InChI Identifier
InChI=1S/C8H12O3/c1-3-8(10)5-4-6-11-7(2)9/h3H,1,4-6H2,2H3
InChI KeyRXRUTODEGWRIMM-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Craterellus cornucopioidesLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as enones. Enones are compounds containing the enone functional group, with the structure RC(=O)CR'.
KingdomOrganic compounds  
Super ClassOrganic oxygen compounds  
ClassOrganooxygen compounds  
Sub ClassCarbonyl compounds  
Direct ParentEnones  
Alternative Parents
Substituents
  • Enone
    • 

  • Acryloyl-group
    • 

  • Ketone
    • 

  • Carboxylic acid ester
    • 

  • Monocarboxylic acid or derivatives
    • 

  • Carboxylic acid derivative
    • 

  • Organic oxide
    • 

  • Hydrocarbon derivative
    • 

  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.01ChemAxon
pKa (Strongest Acidic)19.46ChemAxon
pKa (Strongest Basic)-4.7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area43.37 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity41.15 m³·mol⁻¹ChemAxon
Polarizability16.7 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID78435754  
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound139588464  
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. LOTUS database [Link]