NP-MRD: Showing NP-Card for 3-{14,20-diethyl-5,10,15,19-tetramethyl-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1,3,5,7,9,11(23),12,14,16,18(21),19-undecaen-4-yl}propanoic acid (NP0284092)

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Record Information

Version

2.0

Created at

2022-09-09 11:39:00 UTC

Updated at

2022-09-09 11:39:00 UTC

NP-MRD ID

NP0284092

Secondary Accession Numbers

None

Natural Product Identification

Common Name

3-{14,20-diethyl-5,10,15,19-tetramethyl-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1,3,5,7,9,11(23),12,14,16,18(21),19-undecaen-4-yl}propanoic acid

Description

3-{14,20-Diethyl-5,10,15,19-tetramethyl-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]Tetracosa-1,3,5,7,9,11(23),12,14,16,18(21),19-undecaen-4-yl}propanoic acid is a very strong basic compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004151518322D          

 37 41  0  0  0  0            999 V2000
   -3.3833   -1.0156    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8562   -1.6502    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.4819   -2.0624    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5946   -2.8797    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7243   -1.6459    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0112   -2.0494    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7106   -1.6627    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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  8 36  2  0  0  0  0
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M  END

     RDKit          3D

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M  END


  Mrv1533004151518322D          

 37 41  0  0  0  0            999 V2000
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 11 12  2  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 12 16  1  0  0  0  0
 16 17  1  0  0  0  0
 14 18  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 22 23  1  0  0  0  0
  3 23  1  0  0  0  0
 23 24  2  0  0  0  0
  6 24  1  0  0  0  0
 21 25  1  0  0  0  0
 25 26  2  0  0  0  0
 19 26  1  0  0  0  0
 26 27  1  0  0  0  0
 25 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  2  0  0  0  0
 30 32  1  0  0  0  0
 10 33  2  0  0  0  0
 33 34  1  0  0  0  0
 34 35  1  0  0  0  0
 33 36  1  0  0  0  0
  8 36  2  0  0  0  0
 36 37  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0284092

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCC1=C2NC(\C=C3/N=C(/C=C4\N\C(=C/C5=N/C(=C\2)/C(C)=C5)C(C)=C4CCC(O)=O)C(CC)=C3C)=C1C

> <INCHI_IDENTIFIER>
InChI=1S/C31H34N4O2/c1-7-21-17(4)26-14-27-18(5)22(8-2)29(35-27)15-30-23(9-10-31(36)37)19(6)25(33-30)12-20-11-16(3)24(32-20)13-28(21)34-26/h11-15,33-34H,7-10H2,1-6H3,(H,36,37)/b20-12-,24-13-,25-12-,26-14-,27-14-,28-13-,29-15-,30-15-

> <INCHI_KEY>
HCNHSIZQPOLMAC-UDWHPBRWSA-N

> <FORMULA>
C31H34N4O2

> <MOLECULAR_WEIGHT>
494.639

> <EXACT_MASS>
494.268176351

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
71

> <JCHEM_AVERAGE_POLARIZABILITY>
60.03981882713979

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
3-{14,20-diethyl-5,10,15,19-tetramethyl-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1(21),2,4,6,8(23),9,11,13,15,17,19-undecaen-4-yl}propanoic acid

> <ALOGPS_LOGP>
5.43

> <JCHEM_LOGP>
7.528679121431695

> <ALOGPS_LOGS>
-4.42

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
15.674180744272569

> <JCHEM_PKA_STRONGEST_ACIDIC>
3.9896249026031008

> <JCHEM_PKA_STRONGEST_BASIC>
5.063344124127338

> <JCHEM_POLAR_SURFACE_AREA>
94.66000000000001

> <JCHEM_REFRACTIVITY>
147.81440000000003

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.87e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
3-{14,20-diethyl-5,10,15,19-tetramethyl-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1(21),2,4,6,8(23),9,11,13,15,17,19-undecaen-4-yl}propanoic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 15-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   15-APR-15         0                                  
HETATM    1  C   UNK     0      -6.316  -1.896   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -5.332  -3.080   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -3.814  -2.821   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -2.766  -3.850   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -2.977  -5.375   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -1.352  -3.072   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       0.021  -3.826   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       1.326  -3.104   0.000  0.00  0.00           C+0
HETATM    9  N   UNK     0       1.587  -1.626   0.000  0.00  0.00           N+0
HETATM   10  C   UNK     0       3.114  -1.284   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       3.813   0.033   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       3.036   1.393   0.000  0.00  0.00           C+0
HETATM   13  N   UNK     0       1.613   1.599   0.000  0.00  0.00           N+0
HETATM   14  C   UNK     0       1.327   3.127   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       2.741   3.850   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       3.789   2.821   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       5.310   3.057   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       0.009   3.826   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -1.351   3.104   0.000  0.00  0.00           C+0
HETATM   20  N   UNK     0      -1.666   1.625   0.000  0.00  0.00           N+0
HETATM   21  C   UNK     0      -3.139   1.339   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -3.837  -0.088   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      -3.115  -1.393   0.000  0.00  0.00           C+0
HETATM   24  N   UNK     0      -1.583  -1.653   0.000  0.00  0.00           N+0
HETATM   25  C   UNK     0      -3.807   2.645   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      -2.723   3.748   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      -2.995   5.263   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      -5.329   2.878   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      -6.292   1.677   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      -7.814   1.910   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0      -8.778   0.708   0.000  0.00  0.00           O+0
HETATM   32  O   UNK     0      -8.373   3.345   0.000  0.00  0.00           O+0
HETATM   33  C   UNK     0       3.837  -2.754   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0       5.358  -2.998   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0       6.330  -1.804   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0       2.808  -3.801   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0       3.080  -5.317   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   23                                                  
CONECT    4    3    5    6                                                  
CONECT    5    4                                                            
CONECT    6    4    7   24                                                  
CONECT    7    6    8                                                       
CONECT    8    7    9   36                                                  
CONECT    9    8   10                                                       
CONECT   10    9   11   33                                                  
CONECT   11   10   12                                                       
CONECT   12   11   13   16                                                  
CONECT   13   12   14                                                       
CONECT   14   13   15   18                                                  
CONECT   15   14   16                                                       
CONECT   16   15   12   17                                                  
CONECT   17   16                                                            
CONECT   18   14   19                                                       
CONECT   19   18   20   26                                                  
CONECT   20   19   21                                                       
CONECT   21   20   22   25                                                  
CONECT   22   21   23                                                       
CONECT   23   22    3   24                                                  
CONECT   24   23    6                                                       
CONECT   25   21   26   28                                                  
CONECT   26   25   19   27                                                  
CONECT   27   26                                                            
CONECT   28   25   29                                                       
CONECT   29   28   30                                                       
CONECT   30   29   31   32                                                  
CONECT   31   30                                                            
CONECT   32   30                                                            
CONECT   33   10   34   36                                                  
CONECT   34   33   35                                                       
CONECT   35   34                                                            
CONECT   36   33    8   37                                                  
CONECT   37   36                                                            
MASTER        0    0    0    0    0    0    0    0   37    0   82    0
END

View in JSmol

Synonyms

Value	Source
3-{14,20-diethyl-5,10,15,19-tetramethyl-21,22,23,24-tetraazapentacyclo[16.2.1.1,.1,.1,]tetracosa-1,3,5,7,9,11(23),12,14,16,18(21),19-undecaen-4-yl}propanoate	Generator
3-{14,20-diethyl-5,10,15,19-tetramethyl-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1,3,5,7,9,11(23),12,14,16,18(21),19-undecaen-4-yl}propanoate	Generator

Chemical Formula

C₃₁H₃₄N₄O₂

Average Mass

494.6390 Da

Monoisotopic Mass

494.26818 Da

IUPAC Name

3-{14,20-diethyl-5,10,15,19-tetramethyl-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1(21),2,4,6,8(23),9,11,13,15,17,19-undecaen-4-yl}propanoic acid

Traditional Name

3-{14,20-diethyl-5,10,15,19-tetramethyl-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1(21),2,4,6,8(23),9,11,13,15,17,19-undecaen-4-yl}propanoic acid

CAS Registry Number

Not Available

SMILES

CCC1=C2NC(\C=C3/N=C(/C=C4\N\C(=C/C5=N/C(=C\2)/C(C)=C5)C(C)=C4CCC(O)=O)C(CC)=C3C)=C1C

InChI Identifier

InChI=1S/C31H34N4O2/c1-7-21-17(4)26-14-27-18(5)22(8-2)29(35-27)15-30-23(9-10-31(36)37)19(6)25(33-30)12-20-11-16(3)24(32-20)13-28(21)34-26/h11-15,33-34H,7-10H2,1-6H3,(H,36,37)/b20-12-,24-13-,25-12-,26-14-,27-14-,28-13-,29-15-,30-15-

InChI Key

HCNHSIZQPOLMAC-UDWHPBRWSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	5.43	ALOGPS
logP	7.53	ChemAxon
logS	-4.4	ALOGPS
pKa (Strongest Acidic)	3.99	ChemAxon
pKa (Strongest Basic)	5.06	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	94.66 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	147.81 m³·mol⁻¹	ChemAxon
Polarizability	60.04 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 3-{14,20-diethyl-5,10,15,19-tetramethyl-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1,3,5,7,9,11(23),12,14,16,18(21),19-undecaen-4-yl}propanoic acid (NP0284092)

MOL for NP0284092 (3-{14,20-diethyl-5,10,15,19-tetramethyl-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1,3,5,7,9,11(23),12,14,16,18(21),19-undecaen-4-yl}propanoic acid)

3D MOL for NP0284092 (3-{14,20-diethyl-5,10,15,19-tetramethyl-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1,3,5,7,9,11(23),12,14,16,18(21),19-undecaen-4-yl}propanoic acid)

3D SDF for NP0284092 (3-{14,20-diethyl-5,10,15,19-tetramethyl-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1,3,5,7,9,11(23),12,14,16,18(21),19-undecaen-4-yl}propanoic acid)

3D-SDF for NP0284092 (3-{14,20-diethyl-5,10,15,19-tetramethyl-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1,3,5,7,9,11(23),12,14,16,18(21),19-undecaen-4-yl}propanoic acid)

PDB for NP0284092 (3-{14,20-diethyl-5,10,15,19-tetramethyl-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1,3,5,7,9,11(23),12,14,16,18(21),19-undecaen-4-yl}propanoic acid)

3D PDB for NP0284092 (3-{14,20-diethyl-5,10,15,19-tetramethyl-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1,3,5,7,9,11(23),12,14,16,18(21),19-undecaen-4-yl}propanoic acid)

SMILES for NP0284092 (3-{14,20-diethyl-5,10,15,19-tetramethyl-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1,3,5,7,9,11(23),12,14,16,18(21),19-undecaen-4-yl}propanoic acid)

INCHI for NP0284092 (3-{14,20-diethyl-5,10,15,19-tetramethyl-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1,3,5,7,9,11(23),12,14,16,18(21),19-undecaen-4-yl}propanoic acid)

Structure for NP0284092 (3-{14,20-diethyl-5,10,15,19-tetramethyl-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1,3,5,7,9,11(23),12,14,16,18(21),19-undecaen-4-yl}propanoic acid)

3D Structure for NP0284092 (3-{14,20-diethyl-5,10,15,19-tetramethyl-21,22,23,24-tetraazapentacyclo[16.2.1.1³,⁶.1⁸,¹¹.1¹³,¹⁶]tetracosa-1,3,5,7,9,11(23),12,14,16,18(21),19-undecaen-4-yl}propanoic acid)