| Record Information |
|---|
| Version | 2.0 |
|---|
| Created at | 2022-09-09 11:37:43 UTC |
|---|
| Updated at | 2022-09-09 11:37:43 UTC |
|---|
| NP-MRD ID | NP0284077 |
|---|
| Secondary Accession Numbers | None |
|---|
| Natural Product Identification |
|---|
| Common Name | 4-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-2-methyl-5,6-dihydro-3h-pyrimidine-4-carboxylic acid |
|---|
| Description | 4-{[3,4-Dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-2-methyl-3,4,5,6-tetrahydropyrimidine-4-carboxylic acid belongs to the class of organic compounds known as o-glycosyl compounds. These are glycoside in which a sugar group is bonded through one carbon to another group via a O-glycosidic bond. 4-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-2-methyl-5,6-dihydro-3h-pyrimidine-4-carboxylic acid is found in Lotus tenuis. 4-{[3,4-Dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-2-methyl-3,4,5,6-tetrahydropyrimidine-4-carboxylic acid is a very strong basic compound (based on its pKa). |
|---|
| Structure | CC1=NCCC(N1)(OC1OC(CO)C(O)C1O)C(O)=O InChI=1S/C11H18N2O7/c1-5-12-3-2-11(13-5,10(17)18)20-9-8(16)7(15)6(4-14)19-9/h6-9,14-16H,2-4H2,1H3,(H,12,13)(H,17,18) |
|---|
| Synonyms | | Value | Source |
|---|
| 4-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-2-methyl-3,4,5,6-tetrahydropyrimidine-4-carboxylate | Generator |
|
|---|
| Chemical Formula | C11H18N2O7 |
|---|
| Average Mass | 290.2720 Da |
|---|
| Monoisotopic Mass | 290.11140 Da |
|---|
| IUPAC Name | 4-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-2-methyl-3,4,5,6-tetrahydropyrimidine-4-carboxylic acid |
|---|
| Traditional Name | 4-{[3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}-2-methyl-5,6-dihydro-3H-pyrimidine-4-carboxylic acid |
|---|
| CAS Registry Number | Not Available |
|---|
| SMILES | CC1=NCCC(N1)(OC1OC(CO)C(O)C1O)C(O)=O |
|---|
| InChI Identifier | InChI=1S/C11H18N2O7/c1-5-12-3-2-11(13-5,10(17)18)20-9-8(16)7(15)6(4-14)19-9/h6-9,14-16H,2-4H2,1H3,(H,12,13)(H,17,18) |
|---|
| InChI Key | TUHFNHUGPARRAS-UHFFFAOYSA-N |
|---|
| Experimental Spectra |
|---|
|
| Not Available | | Predicted Spectra |
|---|
|
| | Spectrum Type | Description | Depositor ID | Depositor Organization | Depositor | Deposition Date | View |
|---|
| 1D NMR | 13C NMR Spectrum (1D, 25 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 100 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 252 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 50 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 200 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 75 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 300 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 101 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 400 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 126 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 500 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 151 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 600 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 176 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 700 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 201 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 800 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 13C NMR Spectrum (1D, 226 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum | | 1D NMR | 1H NMR Spectrum (1D, 900 MHz, H2O, predicted) | Wishart Lab | Wishart Lab | David Wishart | 2021-06-20 | View Spectrum |
| | Chemical Shift Submissions |
|---|
|
| Not Available | | Species |
|---|
| Species of Origin | |
|---|
| Chemical Taxonomy |
|---|
| Description | Belongs to the class of organic compounds known as o-glycosyl compounds. These are glycoside in which a sugar group is bonded through one carbon to another group via a O-glycosidic bond. |
|---|
| Kingdom | Organic compounds |
|---|
| Super Class | Organic oxygen compounds |
|---|
| Class | Organooxygen compounds |
|---|
| Sub Class | Carbohydrates and carbohydrate conjugates |
|---|
| Direct Parent | O-glycosyl compounds |
|---|
| Alternative Parents | |
|---|
| Substituents | - O-glycosyl compound
- Alpha-amino acid or derivatives
- Pentose monosaccharide
- Hydropyrimidine carboxylic acid derivative
- Hydropyrimidine
- 1,4,5,6-tetrahydropyrimidine
- Monosaccharide
- Imidolactam
- Tetrahydrofuran
- Secondary alcohol
- Acetal
- Amidine
- Carboxylic acid amidine
- Carboxylic acid derivative
- Carboxylic acid
- Monocarboxylic acid or derivatives
- Oxacycle
- Azacycle
- Organoheterocyclic compound
- Carboximidamide
- Propargyl-type 1,3-dipolar organic compound
- Organic 1,3-dipolar compound
- Carbonyl group
- Organic nitrogen compound
- Organonitrogen compound
- Alcohol
- Primary alcohol
- Organopnictogen compound
- Organic oxide
- Hydrocarbon derivative
- Aliphatic heteromonocyclic compound
|
|---|
| Molecular Framework | Aliphatic heteromonocyclic compounds |
|---|
| External Descriptors | Not Available |
|---|
| Physical Properties |
|---|
| State | Not Available |
|---|
| Experimental Properties | | Property | Value | Reference |
|---|
| Melting Point | Not Available | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | Not Available | Not Available | | LogP | Not Available | Not Available |
|
|---|
| Predicted Properties | |
|---|