Np mrd loader

Record Information
Version2.0
Created at2022-09-09 11:05:15 UTC
Updated at2022-09-09 11:05:15 UTC
NP-MRD IDNP0283711
Secondary Accession NumbersNone
Natural Product Identification
Common Name2'-hydroxy-1'h-[2,3'-biindol]-3-one
DescriptionIndirubin, also known as indigo red, belongs to the class of organic compounds known as hydroxyindoles. These are organic compounds containing an indole moiety that carries a hydroxyl group. 2'-hydroxy-1'h-[2,3'-biindol]-3-one is found in Calanthe discolor, Couroupita guianensis and Isatis tinctoria. 2'-hydroxy-1'h-[2,3'-biindol]-3-one was first documented in 2022 (PMID: 36060126). Based on a literature review a significant number of articles have been published on Indirubin (PMID: 36104717) (PMID: 36098267) (PMID: 35956988) (PMID: 35890405) (PMID: 35876239) (PMID: 35845683).
Structure
Thumb
Synonyms
ValueSource
Indigo redMeSH
Chemical FormulaC16H10N2O2
Average Mass262.2680 Da
Monoisotopic Mass262.07423 Da
IUPAC Name2'-hydroxy-1'H,3H-[2,3'-biindole]-3-one
Traditional Name2'-hydroxy-1'H-[2,3'-biindole]-3-one
CAS Registry NumberNot Available
SMILES
OC1=C(C2=CC=CC=C2N1)C1=NC2=CC=CC=C2C1=O
InChI Identifier
InChI=1S/C16H10N2O2/c19-15-10-6-2-4-8-12(10)17-14(15)13-9-5-1-3-7-11(9)18-16(13)20/h1-8,18,20H
InChI KeyJNLNPCNGMHKCKO-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Calanthe discolorLOTUS Database
Couroupita guianensisLOTUS Database
Isatis tinctoriaLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as hydroxyindoles. These are organic compounds containing an indole moiety that carries a hydroxyl group.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassIndoles and derivatives
Sub ClassHydroxyindoles
Direct ParentHydroxyindoles
Alternative Parents
Substituents
  • Hydroxyindole
  • Indole
  • Aryl ketone
  • Benzenoid
  • Substituted pyrrole
  • Pyrrole
  • Heteroaromatic compound
  • Ketimine
  • Ketone
  • Azacycle
  • Organic 1,3-dipolar compound
  • Propargyl-type 1,3-dipolar organic compound
  • Imine
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organonitrogen compound
  • Organic oxide
  • Organic oxygen compound
  • Organic nitrogen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP3.32ChemAxon
pKa (Strongest Acidic)7.53ChemAxon
pKa (Strongest Basic)-2.7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area65.45 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity77.08 m³·mol⁻¹ChemAxon
Polarizability27.6 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00026982
Chemspider ID21395695
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkIndirubin
METLIN IDNot Available
PubChem Compound10177
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Lu Q, Li J, Ding P, Mao T, Shi L, Sun Z, Tan X, Jiang H, Dong J, Li Y, Yang X, Shi R: Qingchang Wenzhong Decoction Alleviates DSS-Induced Inflammatory Bowel Disease by Inhibiting M1 Macrophage Polarization In Vitro and In Vivo. Biomed Res Int. 2022 Aug 25;2022:9427076. doi: 10.1155/2022/9427076. eCollection 2022. [PubMed:36060126 ]
  2. Qin R, You FM, Zhao Q, Xie X, Peng C, Zhan G, Han B: Naturally derived indole alkaloids targeting regulated cell death (RCD) for cancer therapy: from molecular mechanisms to potential therapeutic targets. J Hematol Oncol. 2022 Sep 14;15(1):133. doi: 10.1186/s13045-022-01350-z. [PubMed:36104717 ]
  3. Soundarya P, Sekar G: Cu-Catalyzed and iodine mediated synthesis of thioaurones via in situ C-S bond generation using xanthate as a sulfur surrogate. Org Biomol Chem. 2022 Sep 28;20(37):7405-7409. doi: 10.1039/d2ob01211a. [PubMed:36098267 ]
  4. Baas J, Bieringer S, Frias C, Frias J, Soehnchen C, Urmann C, Ritter S, Riepl H, Prokop A: Dihydroxyquingdainone Induces Apoptosis in Leukaemia and Lymphoma Cells via the Mitochondrial Pathway in a Bcl-2- and Caspase-3-Dependent Manner and Overcomes Resistance to Cytostatic Drugs In Vitro. Molecules. 2022 Aug 8;27(15):5038. doi: 10.3390/molecules27155038. [PubMed:35956988 ]
  5. Bajracharya R, Song JG, Lee SH, Jeong SH, Han HK: Enhanced Oral Bioavailability of MT-102, a New Anti-inflammatory Agent, via a Ternary Solid Dispersion Formulation. Pharmaceutics. 2022 Jul 21;14(7):1510. doi: 10.3390/pharmaceutics14071510. [PubMed:35890405 ]
  6. Lee J, Kim J, Kim H, Park H, Kim JY, Kim EJ, Yang YH, Choi KY, Kim BG: Constructing multi-enzymatic cascade reactions for selective production of 6-bromoindirubin from tryptophan in Escherichia coli. Biotechnol Bioeng. 2022 Oct;119(10):2938-2949. doi: 10.1002/bit.28188. Epub 2022 Aug 4. [PubMed:35876239 ]
  7. Zeng M, Zhong Y, Guo Z, Yang H, Zhu H, Zheng L, Diao Y: Expression and Functional Study of BcWRKY1 in Baphicacanthus cusia (Nees) Bremek. Front Plant Sci. 2022 Jul 1;13:919071. doi: 10.3389/fpls.2022.919071. eCollection 2022. [PubMed:35845683 ]
  8. Ahmad SS, Khan H, Khalid M, Almalki AS: Emetine and Indirubin- 3- monoxime interaction with human brain acetylcholinesterase: A computational and statistical analysis. Cell Mol Biol (Noisy-le-grand). 2022 Jan 2;67(4):106-114. doi: 10.14715/cmb/2021.67.4.12. [PubMed:35809297 ]
  9. Luo F, Li J, Liu J, Liu K: Stabilizing and upregulating Axin with tankyrase inhibitor reverses 5-fluorouracil chemoresistance and proliferation by targeting the WNT/caveolin-1 axis in colorectal cancer cells. Cancer Gene Ther. 2022 Nov;29(11):1707-1719. doi: 10.1038/s41417-022-00493-y. Epub 2022 Jun 24. [PubMed:35750753 ]
  10. Xu SJ, Guo H, Zhao JF, Jin L, Meng S, Liu ZX, Hao W, Fu JH, Liu JX: [Optimization of extraction process of Children's Qingfei Zhisou Syrup based on pharmacodynamics]. Zhongguo Zhong Yao Za Zhi. 2022 May;47(10):2652-2657. doi: 10.19540/j.cnki.cjcmm.20210806.301. [PubMed:35718483 ]
  11. LOTUS database [Link]