NP-MRD: Showing NP-Card for 11-ethyl-16,18,20-trimethoxy-13-(methoxymethyl)-11-azahexacyclo[7.7.2.2⁴,⁸.0¹,¹⁰.0²,⁶.0¹³,¹⁷]icosane-5,8,9-triol (NP0283616)

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Record Information

Version

2.0

Created at

2022-09-09 10:57:16 UTC

Updated at

2022-09-09 10:57:17 UTC

NP-MRD ID

NP0283616

Secondary Accession Numbers

None

Natural Product Identification

Common Name

11-ethyl-16,18,20-trimethoxy-13-(methoxymethyl)-11-azahexacyclo[7.7.2.2⁴,⁸.0¹,¹⁰.0²,⁶.0¹³,¹⁷]icosane-5,8,9-triol

Description

11-Ethyl-16,18,20-trimethoxy-13-(methoxymethyl)-11-azahexacyclo[7.7.2.2⁴,⁸.0¹,¹⁰.0²,⁶.0¹³,¹⁷]Icosane-5,8,9-triol belongs to the class of organic compounds known as azepanes. These are organic compounds containing a saturated seven member heterocycle, with one nitrogen atom. 11-ethyl-16,18,20-trimethoxy-13-(methoxymethyl)-11-azahexacyclo[7.7.2.2⁴,⁸.0¹,¹⁰.0²,⁶.0¹³,¹⁷]icosane-5,8,9-triol is found in Delphinium leroyi. 11-Ethyl-16,18,20-trimethoxy-13-(methoxymethyl)-11-azahexacyclo[7.7.2.2⁴,⁸.0¹,¹⁰.0²,⁶.0¹³,¹⁷]Icosane-5,8,9-triol is a very strong basic compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004191517152D          

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M  END

     RDKit          3D

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M  END


  Mrv1533004191517152D          

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  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  5  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 11 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 18 20  1  0  0  0  0
 15 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 22 24  1  0  0  0  0
 24 25  1  0  0  0  0
 17 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 22 28  1  0  0  0  0
 28 29  1  0  0  0  0
 28 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 30 33  1  0  0  0  0
  5 33  1  0  0  0  0
 14 33  1  0  0  0  0
 28 34  1  0  0  0  0
  3 34  1  0  0  0  0
 14 34  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0283616

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCN1CC2(COC)CCC(OC)C34C5CC6C(O)C5CC(O)(CC6OC)C(O)(C(OC)C23)C14

> <INCHI_IDENTIFIER>
InChI=1S/C26H43NO7/c1-6-27-12-23(13-31-2)8-7-18(33-4)25-16-9-14-17(32-3)11-24(29,10-15(16)19(14)28)26(30,22(25)27)21(34-5)20(23)25/h14-22,28-30H,6-13H2,1-5H3

> <INCHI_KEY>
VJDAZPBBKQWBNW-UHFFFAOYSA-N

> <FORMULA>
C26H43NO7

> <MOLECULAR_WEIGHT>
481.63

> <EXACT_MASS>
481.303952729

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
77

> <JCHEM_AVERAGE_POLARIZABILITY>
52.79112942191237

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
11-ethyl-16,18,20-trimethoxy-13-(methoxymethyl)-11-azahexacyclo[7.7.2.2⁴,⁸.0¹,¹⁰.0²,⁶.0¹³,¹⁷]icosane-5,8,9-triol

> <ALOGPS_LOGP>
0.47

> <JCHEM_LOGP>
-1.0319981850000004

> <ALOGPS_LOGS>
-2.21

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA>
14.079347066399869

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.274249236827274

> <JCHEM_PKA_STRONGEST_BASIC>
10.082433920194745

> <JCHEM_POLAR_SURFACE_AREA>
100.85000000000002

> <JCHEM_REFRACTIVITY>
125.01479999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
6

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
2.97e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
11-ethyl-16,18,20-trimethoxy-13-(methoxymethyl)-11-azahexacyclo[7.7.2.2⁴,⁸.0¹,¹⁰.0²,⁶.0¹³,¹⁷]icosane-5,8,9-triol

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 19-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   19-APR-15         0                                  
HETATM    1  C   UNK     0      -0.314  -5.622   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       1.465  -5.025   0.000  0.00  0.00           C+0
HETATM    3  N   UNK     0       1.974  -3.413   0.000  0.00  0.00           N+0
HETATM    4  C   UNK     0       0.786  -2.208   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       1.304  -0.707   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -0.227   0.111   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0      -0.856   1.600   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0       0.073   2.828   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       1.483   0.877   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       2.911   1.511   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       4.092   0.458   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0       4.258   2.146   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0       4.720   3.682   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       4.006  -1.215   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       5.531  -0.268   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       7.033   0.774   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       8.601  -0.496   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       7.718  -0.032   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0       8.756   1.220   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0       6.458  -1.151   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       6.634  -2.716   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       6.325  -3.803   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0       6.561  -5.371   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0       8.096  -3.513   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       9.163  -2.099   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0      10.743  -2.404   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0      11.630  -3.712   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       4.471  -3.686   0.000  0.00  0.00           C+0
HETATM   29  O   UNK     0       4.555  -5.327   0.000  0.00  0.00           O+0
HETATM   30  C   UNK     0       2.636  -2.888   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0       0.926  -3.847   0.000  0.00  0.00           O+0
HETATM   32  C   UNK     0      -0.719  -3.866   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0       2.730  -1.206   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0       3.496  -3.089   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   34                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6    9   33                                             
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7                                                            
CONECT    9    5   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12   14                                                  
CONECT   12   11   13                                                       
CONECT   13   12                                                            
CONECT   14   11   15   33   34                                             
CONECT   15   14   16   20                                                  
CONECT   16   15   17                                                       
CONECT   17   16   18   25                                                  
CONECT   18   17   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18   15   21                                                  
CONECT   21   20   22                                                       
CONECT   22   21   23   24   28                                             
CONECT   23   22                                                            
CONECT   24   22   25                                                       
CONECT   25   24   17   26                                                  
CONECT   26   25   27                                                       
CONECT   27   26                                                            
CONECT   28   22   29   30   34                                             
CONECT   29   28                                                            
CONECT   30   28   31   33                                                  
CONECT   31   30   32                                                       
CONECT   32   31                                                            
CONECT   33   30    5   14                                                  
CONECT   34   28    3   14                                                  
MASTER        0    0    0    0    0    0    0    0   34    0   78    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₆H₄₃NO₇

Average Mass

481.6300 Da

Monoisotopic Mass

481.30395 Da

IUPAC Name

11-ethyl-16,18,20-trimethoxy-13-(methoxymethyl)-11-azahexacyclo[7.7.2.2⁴,⁸.0¹,¹⁰.0²,⁶.0¹³,¹⁷]icosane-5,8,9-triol

Traditional Name

11-ethyl-16,18,20-trimethoxy-13-(methoxymethyl)-11-azahexacyclo[7.7.2.2⁴,⁸.0¹,¹⁰.0²,⁶.0¹³,¹⁷]icosane-5,8,9-triol

CAS Registry Number

Not Available

SMILES

CCN1CC2(COC)CCC(OC)C34C5CC6C(O)C5CC(O)(CC6OC)C(O)(C(OC)C23)C14

InChI Identifier

InChI=1S/C26H43NO7/c1-6-27-12-23(13-31-2)8-7-18(33-4)25-16-9-14-17(32-3)11-24(29,10-15(16)19(14)28)26(30,22(25)27)21(34-5)20(23)25/h14-22,28-30H,6-13H2,1-5H3

InChI Key

VJDAZPBBKQWBNW-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Delphinium leroyi	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as azepanes. These are organic compounds containing a saturated seven member heterocycle, with one nitrogen atom.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Azepanes

Sub Class

Not Available

Direct Parent

Azepanes

Alternative Parents

Substituents

Azepane
Piperidine
Cyclic alcohol
Tertiary alcohol
Tertiary aliphatic amine
Tertiary amine
1,2-aminoalcohol
Secondary alcohol
Azacycle
Polyol
Dialkyl ether
Ether
Organopnictogen compound
Organonitrogen compound
Organooxygen compound
Organic oxygen compound
Alcohol
Organic nitrogen compound
Amine
Hydrocarbon derivative
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	0.47	ALOGPS
logP	-1	ChemAxon
logS	-2.2	ALOGPS
pKa (Strongest Acidic)	12.27	ChemAxon
pKa (Strongest Basic)	10.08	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	8	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	100.85 Å²	ChemAxon
Rotatable Bond Count	6	ChemAxon
Refractivity	125.01 m³·mol⁻¹	ChemAxon
Polarizability	52.79 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 11-ethyl-16,18,20-trimethoxy-13-(methoxymethyl)-11-azahexacyclo[7.7.2.2⁴,⁸.0¹,¹⁰.0²,⁶.0¹³,¹⁷]icosane-5,8,9-triol (NP0283616)

MOL for NP0283616 (11-ethyl-16,18,20-trimethoxy-13-(methoxymethyl)-11-azahexacyclo[7.7.2.2⁴,⁸.0¹,¹⁰.0²,⁶.0¹³,¹⁷]icosane-5,8,9-triol)

3D MOL for NP0283616 (11-ethyl-16,18,20-trimethoxy-13-(methoxymethyl)-11-azahexacyclo[7.7.2.2⁴,⁸.0¹,¹⁰.0²,⁶.0¹³,¹⁷]icosane-5,8,9-triol)

3D SDF for NP0283616 (11-ethyl-16,18,20-trimethoxy-13-(methoxymethyl)-11-azahexacyclo[7.7.2.2⁴,⁸.0¹,¹⁰.0²,⁶.0¹³,¹⁷]icosane-5,8,9-triol)

3D-SDF for NP0283616 (11-ethyl-16,18,20-trimethoxy-13-(methoxymethyl)-11-azahexacyclo[7.7.2.2⁴,⁸.0¹,¹⁰.0²,⁶.0¹³,¹⁷]icosane-5,8,9-triol)

PDB for NP0283616 (11-ethyl-16,18,20-trimethoxy-13-(methoxymethyl)-11-azahexacyclo[7.7.2.2⁴,⁸.0¹,¹⁰.0²,⁶.0¹³,¹⁷]icosane-5,8,9-triol)

3D PDB for NP0283616 (11-ethyl-16,18,20-trimethoxy-13-(methoxymethyl)-11-azahexacyclo[7.7.2.2⁴,⁸.0¹,¹⁰.0²,⁶.0¹³,¹⁷]icosane-5,8,9-triol)

SMILES for NP0283616 (11-ethyl-16,18,20-trimethoxy-13-(methoxymethyl)-11-azahexacyclo[7.7.2.2⁴,⁸.0¹,¹⁰.0²,⁶.0¹³,¹⁷]icosane-5,8,9-triol)

INCHI for NP0283616 (11-ethyl-16,18,20-trimethoxy-13-(methoxymethyl)-11-azahexacyclo[7.7.2.2⁴,⁸.0¹,¹⁰.0²,⁶.0¹³,¹⁷]icosane-5,8,9-triol)

Structure for NP0283616 (11-ethyl-16,18,20-trimethoxy-13-(methoxymethyl)-11-azahexacyclo[7.7.2.2⁴,⁸.0¹,¹⁰.0²,⁶.0¹³,¹⁷]icosane-5,8,9-triol)

3D Structure for NP0283616 (11-ethyl-16,18,20-trimethoxy-13-(methoxymethyl)-11-azahexacyclo[7.7.2.2⁴,⁸.0¹,¹⁰.0²,⁶.0¹³,¹⁷]icosane-5,8,9-triol)