NP-MRD: Showing NP-Card for (1s,11r,13r,15r,16s,18r)-9-methoxy-5,7,17-trioxa-12-azahexacyclo[10.6.2.0¹,¹³.0²,¹⁰.0⁴,⁸.0¹⁶,¹⁸]icosa-2(10),3,8-triene-11,15-diol (NP0283505)

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Record Information

Version

2.0

Created at

2022-09-09 10:48:04 UTC

Updated at

2022-09-09 10:48:04 UTC

NP-MRD ID

NP0283505

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1s,11r,13r,15r,16s,18r)-9-methoxy-5,7,17-trioxa-12-azahexacyclo[10.6.2.0¹,¹³.0²,¹⁰.0⁴,⁸.0¹⁶,¹⁸]icosa-2(10),3,8-triene-11,15-diol

Description

6Alpha-Hydroxycrinamidine belongs to the class of organic compounds known as crinine- and haemanthamine-type amaryllidaceae alkaloids. These are amaryllidaceae alkaloids compounds with a structure based on the crinine or haemanthamine backbone. Both backbones have a common 5,10b-ethano bridge moiety in their frameworks, which is a very significant taxonomic feature, and the configurations of the 5,10b-ethano bridge are opposite to each other. (1s,11r,13r,15r,16s,18r)-9-methoxy-5,7,17-trioxa-12-azahexacyclo[10.6.2.0¹,¹³.0²,¹⁰.0⁴,⁸.0¹⁶,¹⁸]icosa-2(10),3,8-triene-11,15-diol is found in Ammocharis tinneana. Based on a literature review very few articles have been published on 6alpha-Hydroxycrinamidine.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309092212482D          

 24 29  0  0  1  0            999 V2000
    4.0068    4.0639    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1821    4.0832    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7530    3.3786    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1487    2.6547    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7196    1.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8948    1.9693    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4991    2.6932    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9282    3.3978    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6448    4.1726    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.2199    4.7641    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8624    4.4341    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.1701    3.9855    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0892    3.1644    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6807    2.5893    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0343    2.0767    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.6122    1.5641    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7329    2.3803    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.8536    3.1964    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.6207    3.4999    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2071    3.7090    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5600    3.4054    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.2572    1.3242    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0185    1.6421    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9514    2.4643    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  3  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  6  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 14 13  1  1  0  0  0
  7 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  1  0  0  0
 17 16  1  1  0  0  0
 15 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  6  0  0  0
 18 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 11  1  1  0  0  0
 14 21  1  0  0  0  0
  5 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
  4 24  1  0  0  0  0
M  END

     RDKit          3D

 43 48  0  0  0  0  0  0  0  0999 V2000
   -3.2533    2.9777   -0.3806 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8765    2.0249    0.5954 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3167    0.7969    0.2849 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1708   -0.2647    0.0887 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6088   -1.5050   -0.2247 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2437   -1.6413   -0.3294 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3723   -0.5808   -0.1342 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9338    0.6548    0.1779 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1208    1.8703    0.4076 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.3636    2.2973    1.7120 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2478    1.5818    0.1506 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.4564    1.4467   -1.2610 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4598   -0.0257   -1.5744 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0749   -0.6714   -0.2333 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.6944   -2.0095   -0.0678 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.9172   -2.1460   -0.9428 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9578   -2.1580    0.5443 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.7514   -1.0063    1.0075 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.9739   -0.9961    2.3655 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.1973    0.3367    0.6124 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6899    0.3299    0.7300 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.6448   -2.4160   -0.3768 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8904   -1.7846   -0.0894 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5476   -0.4430    0.1223 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6347    2.9306   -1.2928 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3232    2.8363   -0.6762 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1869    3.9777    0.0981 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8002   -2.5874   -0.5720 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4587    2.6358   -0.3202 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7855    1.5775    2.2559 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6136    1.9481   -1.8113 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3898    1.9512   -1.6059 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6644   -0.2616   -2.3215 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4301   -0.3700   -1.9294 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1327   -2.9503   -0.2795 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2673   -3.1339    0.9581 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7707   -1.0718    0.5225 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4258   -1.8222    2.6656 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4574    0.5698   -0.4388 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5720    1.1133    1.3179 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3276    0.1537    1.7404 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3571   -2.2654    0.8062 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5827   -1.9001   -0.9603 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4 24  1  0
 24 23  1  0
 23 22  1  0
 22  5  1  0
  5  6  2  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  1  0
  9 11  1  0
 11 12  1  0
 12 13  1  0
 14 13  1  6
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 18 20  1  0
 20 21  1  0
  8  3  1  0
 21 11  1  0
  5  4  1  0
 14  7  1  0
 21 14  1  0
 17 15  1  0
  1 25  1  0
  1 26  1  0
  1 27  1  0
 23 42  1  0
 23 43  1  0
  6 28  1  0
  9 29  1  6
 10 30  1  0
 12 31  1  0
 12 32  1  0
 13 33  1  0
 13 34  1  0
 15 35  1  6
 17 36  1  6
 18 37  1  6
 19 38  1  0
 20 39  1  0
 20 40  1  0
 21 41  1  1
M  END


  Mrv1652309092212482D          

 24 29  0  0  1  0            999 V2000
    4.0068    4.0639    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1821    4.0832    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7530    3.3786    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1487    2.6547    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7196    1.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8948    1.9693    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4991    2.6932    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9282    3.3978    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6448    4.1726    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.2199    4.7641    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8624    4.4341    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.1701    3.9855    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0892    3.1644    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6807    2.5893    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0343    2.0767    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.6122    1.5641    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7329    2.3803    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.8536    3.1964    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.6207    3.4999    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2071    3.7090    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5600    3.4054    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.2572    1.3242    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0185    1.6421    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9514    2.4643    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  3  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  6  0  0  0
  9 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 14 13  1  1  0  0  0
  7 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  1  0  0  0
 17 16  1  1  0  0  0
 15 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  6  0  0  0
 18 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 11  1  1  0  0  0
 14 21  1  0  0  0  0
  5 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
  4 24  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0283505

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=C2OCOC2=CC2=C1[C@@H](O)N1CC[C@]22[C@H]3O[C@H]3[C@H](O)C[C@@H]12

> <INCHI_IDENTIFIER>
InChI=1S/C17H19NO6/c1-21-14-11-7(4-9-13(14)23-6-22-9)17-2-3-18(16(11)20)10(17)5-8(19)12-15(17)24-12/h4,8,10,12,15-16,19-20H,2-3,5-6H2,1H3/t8-,10-,12+,15+,16-,17+/m1/s1

> <INCHI_KEY>
LLCOGABKVKVHRW-WQUARQSHSA-N

> <FORMULA>
C17H19NO6

> <MOLECULAR_WEIGHT>
333.34

> <EXACT_MASS>
333.121237336

> <JCHEM_ACCEPTOR_COUNT>
7

> <JCHEM_ATOM_COUNT>
43

> <JCHEM_AVERAGE_POLARIZABILITY>
33.30319421928724

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1S,11R,13R,15R,16S,18R)-9-methoxy-5,7,17-trioxa-12-azahexacyclo[10.6.2.0^{1,13}.0^{2,10}.0^{4,8}.0^{16,18}]icosa-2(10),3,8-triene-11,15-diol

> <JCHEM_LOGP>
-0.04645838966666638

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA>
14.07484655126077

> <JCHEM_PKA_STRONGEST_ACIDIC>
12.51169066981269

> <JCHEM_PKA_STRONGEST_BASIC>
6.776939967402594

> <JCHEM_POLAR_SURFACE_AREA>
83.92000000000002

> <JCHEM_REFRACTIVITY>
80.7348

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(1S,11R,13R,15R,16S,18R)-9-methoxy-5,7,17-trioxa-12-azahexacyclo[10.6.2.0^{1,13}.0^{2,10}.0^{4,8}.0^{16,18}]icosa-2(10),3,8-triene-11,15-diol

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 09-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   09-SEP-22         0                                  
HETATM    1  C   UNK     0       7.479   7.586   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       5.940   7.622   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       5.139   6.307   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       5.878   4.955   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       5.077   3.640   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       3.537   3.676   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       2.798   5.027   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       3.599   6.343   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       3.070   7.789   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0       4.144   8.893   0.000  0.00  0.00           O+0
HETATM   11  N   UNK     0       1.610   8.277   0.000  0.00  0.00           N+0
HETATM   12  C   UNK     0       0.317   7.440   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       0.167   5.907   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       1.271   4.833   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       0.064   3.877   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0      -1.143   2.920   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0      -1.368   4.443   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      -1.593   5.967   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0      -3.025   6.533   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0      -0.387   6.923   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       1.045   6.357   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0       6.080   2.472   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0       7.501   3.065   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0       7.376   4.600   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    8                                                  
CONECT    4    3    5   24                                                  
CONECT    5    4    6   22                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8   14                                                  
CONECT    8    7    3    9                                                  
CONECT    9    8   10   11                                                  
CONECT   10    9                                                            
CONECT   11    9   12   21                                                  
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13    7   15   21                                             
CONECT   15   14   16   17                                                  
CONECT   16   15   17                                                       
CONECT   17   16   15   18                                                  
CONECT   18   17   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18   21                                                       
CONECT   21   20   11   14                                                  
CONECT   22    5   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23    4                                                       
MASTER        0    0    0    0    0    0    0    0   24    0   58    0
END

View in JSmol

Synonyms

Value	Source
6a-Hydroxycrinamidine	Generator
6Α-hydroxycrinamidine	Generator

Chemical Formula

C₁₇H₁₉NO₆

Average Mass

333.3400 Da

Monoisotopic Mass

333.12124 Da

IUPAC Name

(1S,11R,13R,15R,16S,18R)-9-methoxy-5,7,17-trioxa-12-azahexacyclo[10.6.2.0^{1,13}.0^{2,10}.0^{4,8}.0^{16,18}]icosa-2(10),3,8-triene-11,15-diol

Traditional Name

(1S,11R,13R,15R,16S,18R)-9-methoxy-5,7,17-trioxa-12-azahexacyclo[10.6.2.0^{1,13}.0^{2,10}.0^{4,8}.0^{16,18}]icosa-2(10),3,8-triene-11,15-diol

CAS Registry Number

Not Available

SMILES

COC1=C2OCOC2=CC2=C1[C@@H](O)N1CC[C@]22[C@H]3O[C@H]3[C@H](O)C[C@@H]12

InChI Identifier

InChI=1S/C17H19NO6/c1-21-14-11-7(4-9-13(14)23-6-22-9)17-2-3-18(16(11)20)10(17)5-8(19)12-15(17)24-12/h4,8,10,12,15-16,19-20H,2-3,5-6H2,1H3/t8-,10-,12+,15+,16-,17+/m1/s1

InChI Key

LLCOGABKVKVHRW-WQUARQSHSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Ammocharis tinneana	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as crinine- and haemanthamine-type amaryllidaceae alkaloids. These are amaryllidaceae alkaloids compounds with a structure based on the crinine or haemanthamine backbone. Both backbones have a common 5,10b-ethano bridge moiety in their frameworks, which is a very significant taxonomic feature, and the configurations of the 5,10b-ethano bridge are opposite to each other.

Kingdom

Organic compounds

Super Class

Alkaloids and derivatives

Class

Amaryllidaceae alkaloids

Sub Class

Crinine- and Haemanthamine-type amaryllidaceae alkaloids

Direct Parent

Crinine- and Haemanthamine-type amaryllidaceae alkaloids

Alternative Parents

Substituents

Hemanthamine/crinine alkaloid skeleton
Benzoquinoline
Phenanthridine
Benzazepine
Tetrahydroisoquinoline
Quinoline
Benzodioxole
Indole or derivatives
Anisole
Alkyl aryl ether
Azepine
Oxepane
Benzenoid
N-alkylpyrrolidine
Pyrrolidine
Cyclic alcohol
Secondary alcohol
Acetal
Alkanolamine
Oxacycle
Azacycle
Dialkyl ether
Oxirane
Ether
Organoheterocyclic compound
Alcohol
Organic nitrogen compound
Organooxygen compound
Organic oxygen compound
Organopnictogen compound
Hydrocarbon derivative
Organonitrogen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	-0.046	ChemAxon
pKa (Strongest Acidic)	12.51	ChemAxon
pKa (Strongest Basic)	6.78	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	7	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	83.92 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	80.73 m³·mol⁻¹	ChemAxon
Polarizability	33.3 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

101036743

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (1s,11r,13r,15r,16s,18r)-9-methoxy-5,7,17-trioxa-12-azahexacyclo[10.6.2.0¹,¹³.0²,¹⁰.0⁴,⁸.0¹⁶,¹⁸]icosa-2(10),3,8-triene-11,15-diol (NP0283505)

MOL for NP0283505 ((1s,11r,13r,15r,16s,18r)-9-methoxy-5,7,17-trioxa-12-azahexacyclo[10.6.2.0¹,¹³.0²,¹⁰.0⁴,⁸.0¹⁶,¹⁸]icosa-2(10),3,8-triene-11,15-diol)

3D MOL for NP0283505 ((1s,11r,13r,15r,16s,18r)-9-methoxy-5,7,17-trioxa-12-azahexacyclo[10.6.2.0¹,¹³.0²,¹⁰.0⁴,⁸.0¹⁶,¹⁸]icosa-2(10),3,8-triene-11,15-diol)

3D SDF for NP0283505 ((1s,11r,13r,15r,16s,18r)-9-methoxy-5,7,17-trioxa-12-azahexacyclo[10.6.2.0¹,¹³.0²,¹⁰.0⁴,⁸.0¹⁶,¹⁸]icosa-2(10),3,8-triene-11,15-diol)

3D-SDF for NP0283505 ((1s,11r,13r,15r,16s,18r)-9-methoxy-5,7,17-trioxa-12-azahexacyclo[10.6.2.0¹,¹³.0²,¹⁰.0⁴,⁸.0¹⁶,¹⁸]icosa-2(10),3,8-triene-11,15-diol)

PDB for NP0283505 ((1s,11r,13r,15r,16s,18r)-9-methoxy-5,7,17-trioxa-12-azahexacyclo[10.6.2.0¹,¹³.0²,¹⁰.0⁴,⁸.0¹⁶,¹⁸]icosa-2(10),3,8-triene-11,15-diol)

3D PDB for NP0283505 ((1s,11r,13r,15r,16s,18r)-9-methoxy-5,7,17-trioxa-12-azahexacyclo[10.6.2.0¹,¹³.0²,¹⁰.0⁴,⁸.0¹⁶,¹⁸]icosa-2(10),3,8-triene-11,15-diol)

SMILES for NP0283505 ((1s,11r,13r,15r,16s,18r)-9-methoxy-5,7,17-trioxa-12-azahexacyclo[10.6.2.0¹,¹³.0²,¹⁰.0⁴,⁸.0¹⁶,¹⁸]icosa-2(10),3,8-triene-11,15-diol)

INCHI for NP0283505 ((1s,11r,13r,15r,16s,18r)-9-methoxy-5,7,17-trioxa-12-azahexacyclo[10.6.2.0¹,¹³.0²,¹⁰.0⁴,⁸.0¹⁶,¹⁸]icosa-2(10),3,8-triene-11,15-diol)

Structure for NP0283505 ((1s,11r,13r,15r,16s,18r)-9-methoxy-5,7,17-trioxa-12-azahexacyclo[10.6.2.0¹,¹³.0²,¹⁰.0⁴,⁸.0¹⁶,¹⁸]icosa-2(10),3,8-triene-11,15-diol)

3D Structure for NP0283505 ((1s,11r,13r,15r,16s,18r)-9-methoxy-5,7,17-trioxa-12-azahexacyclo[10.6.2.0¹,¹³.0²,¹⁰.0⁴,⁸.0¹⁶,¹⁸]icosa-2(10),3,8-triene-11,15-diol)