NP-MRD: Showing NP-Card for (1r,2r,4s,5s,6s,10r,11s,12r,15r,16r,18s,19r)-4,18-bis(acetyloxy)-16-hydroxy-1,5,10,15-tetramethyl-6-[(3s)-5-oxooxolan-3-yl]-13-oxapentacyclo[10.6.1.0²,¹⁰.0⁵,⁹.0¹⁵,¹⁹]nonadec-8-en-11-yl (2e)-3,4-dimethylpent-2-enoate (NP0282870)

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Record Information

Version

2.0

Created at

2022-09-09 09:52:33 UTC

Updated at

2022-09-09 09:52:34 UTC

NP-MRD ID

NP0282870

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1r,2r,4s,5s,6s,10r,11s,12r,15r,16r,18s,19r)-4,18-bis(acetyloxy)-16-hydroxy-1,5,10,15-tetramethyl-6-[(3s)-5-oxooxolan-3-yl]-13-oxapentacyclo[10.6.1.0²,¹⁰.0⁵,⁹.0¹⁵,¹⁹]nonadec-8-en-11-yl (2e)-3,4-dimethylpent-2-enoate

Description

(1R,2R,4S,5S,6S,10R,11S,12R,15R,16R,18S,19R)-4,18-bis(acetyloxy)-16-hydroxy-1,5,10,15-tetramethyl-6-[(3S)-5-oxooxolan-3-yl]-13-oxapentacyclo[10.6.1.0²,¹⁰.0⁵,⁹.0¹⁵,¹⁹]Nonadec-8-en-11-yl (2E)-3,4-dimethylpent-2-enoate belongs to the class of organic compounds known as limonoids. These are highly oxygenated, modified terpenoids with a prototypical structure either containing or derived from a precursor with a 4,4,8-trimethyl-17-furanylsteroid skeleton. All naturally occurring citrus limonoids contain a furan ring attached to the D-ring, at C-17, as well as oxygen containing functional groups at C-3, C-4, C-7, C-16 and C-17. Based on a literature review very few articles have been published on (1R,2R,4S,5S,6S,10R,11S,12R,15R,16R,18S,19R)-4,18-bis(acetyloxy)-16-hydroxy-1,5,10,15-tetramethyl-6-[(3S)-5-oxooxolan-3-yl]-13-oxapentacyclo[10.6.1.0²,¹⁰.0⁵,⁹.0¹⁵,¹⁹]Nonadec-8-en-11-yl (2E)-3,4-dimethylpent-2-enoate.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309092211522D          

 47 52  0  0  1  0            999 V2000
    4.5642    4.5610    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2568    3.7954    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4401    3.6788    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.7662    3.1464    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.4588    2.3808    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.6421    2.2642    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3347    1.4986    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.8440    0.8496    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.3534    0.2006    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6608    0.9662    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2939    0.4372    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9926    0.8760    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7912    1.6760    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.3202    2.3092    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.1188    3.1092    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8175    3.5479    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.4507    3.0190    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2507    3.2203    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.1433    2.2534    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9681    1.7318    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.3539    2.4610    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5367    0.0840    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.0460   -0.5650    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7386   -1.3306    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9219   -1.4472    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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    1.4666   -0.4919    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4360    0.3325    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.6953   -0.0308    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8028    0.8614    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0282    0.5776    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9443    1.6742    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7189    1.9581    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8314    2.7754    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1798    3.2814    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4158    2.9701    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2922    4.0987    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5180    1.3820    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.7152    2.1830    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2106    0.6164    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  2  4  1  0  0  0  0
  5  4  1  6  0  0  0
  5  6  1  0  0  0  0
  7  6  1  1  0  0  0
  7  8  1  0  0  0  0
  8  9  1  1  0  0  0
  8 10  1  0  0  0  0
 10 11  2  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  6  0  0  0
 14 15  1  1  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 17 19  1  0  0  0  0
 14 19  1  0  0  0  0
 13 20  1  0  0  0  0
 10 20  1  0  0  0  0
  5 20  1  0  0  0  0
 20 21  1  6  0  0  0
  8 22  1  0  0  0  0
 22 23  1  6  0  0  0
 23 24  1  0  0  0  0
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 27 28  1  0  0  0  0
 27 29  1  0  0  0  0
 29 30  1  0  0  0  0
 29 31  1  0  0  0  0
 22 32  1  0  0  0  0
 32 33  1  6  0  0  0
 33 34  1  0  0  0  0
 34 35  1  0  0  0  0
 35 36  1  1  0  0  0
 35 37  1  0  0  0  0
 37 38  1  6  0  0  0
 37 39  1  0  0  0  0
 39 40  1  0  0  0  0
 40 41  1  6  0  0  0
 41 42  1  0  0  0  0
 42 43  1  0  0  0  0
 42 44  2  0  0  0  0
 40 45  1  0  0  0  0
  7 45  1  0  0  0  0
 45 46  1  1  0  0  0
 45 47  1  0  0  0  0
 47 32  1  1  0  0  0
 35 47  1  0  0  0  0
M  END

     RDKit          3D

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 29 31  1  0
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 20 13  1  0
 13 12  1  0
 12 11  1  0
 11 10  2  0
 10  8  1  0
  8  9  1  1
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  2  0
 17 19  1  0
  8 22  1  0
 19 14  1  0
 47 32  1  0
  8  7  1  0
 37 35  1  0
 10 20  1  0
 30 76  1  0
 30 77  1  0
 30 78  1  0
 29 75  1  0
 31 79  1  0
 31 80  1  0
 31 81  1  0
 28 72  1  0
 28 73  1  0
 28 74  1  0
 26 71  1  0
 22 70  1  1
 32 82  1  1
 34 83  1  0
 34 84  1  0
 36 85  1  0
 36 86  1  0
 36 87  1  0
 47 99  1  6
 46 96  1  0
 46 97  1  0
 46 98  1  0
 40 92  1  6
 39 90  1  0
 39 91  1  0
 37 88  1  1
 38 89  1  0
 43 93  1  0
 43 94  1  0
 43 95  1  0
  7 54  1  6
  6 52  1  0
  6 53  1  0
  5 51  1  1
  1 48  1  0
  1 49  1  0
  1 50  1  0
 21 67  1  0
 21 68  1  0
 21 69  1  0
 13 61  1  1
 12 59  1  0
 12 60  1  0
 11 58  1  0
  9 55  1  0
  9 56  1  0
  9 57  1  0
 14 62  1  1
 15 63  1  0
 15 64  1  0
 19 65  1  0
 19 66  1  0
M  END


  Mrv1652309092211522D          

 47 52  0  0  1  0            999 V2000
    4.5642    4.5610    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2568    3.7954    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4401    3.6788    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.7662    3.1464    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.4588    2.3808    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.6421    2.2642    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3347    1.4986    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.8440    0.8496    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.3534    0.2006    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6608    0.9662    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2939    0.4372    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9926    0.8760    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7912    1.6760    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.3202    2.3092    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.1188    3.1092    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8175    3.5479    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.4507    3.0190    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2507    3.2203    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.1433    2.2534    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9681    1.7318    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.3539    2.4610    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5367    0.0840    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.0460   -0.5650    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7386   -1.3306    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9219   -1.4472    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2479   -1.9796    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9406   -2.7452    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1238   -2.8618    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4499   -3.3942    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2666   -3.2776    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1425   -4.1598    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7199   -0.0326    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.2601   -0.7176    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4666   -0.4919    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4360    0.3325    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.6953   -0.0308    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8028    0.8614    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0282    0.5776    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9443    1.6742    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7189    1.9581    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8314    2.7754    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1798    3.2814    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4158    2.9701    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2922    4.0987    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5180    1.3820    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.7152    2.1830    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2106    0.6164    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  2  4  1  0  0  0  0
  5  4  1  6  0  0  0
  5  6  1  0  0  0  0
  7  6  1  1  0  0  0
  7  8  1  0  0  0  0
  8  9  1  1  0  0  0
  8 10  1  0  0  0  0
 10 11  2  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  6  0  0  0
 14 15  1  1  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 17 19  1  0  0  0  0
 14 19  1  0  0  0  0
 13 20  1  0  0  0  0
 10 20  1  0  0  0  0
  5 20  1  0  0  0  0
 20 21  1  6  0  0  0
  8 22  1  0  0  0  0
 22 23  1  6  0  0  0
 23 24  1  0  0  0  0
 24 25  2  0  0  0  0
 24 26  1  0  0  0  0
 26 27  2  0  0  0  0
 27 28  1  0  0  0  0
 27 29  1  0  0  0  0
 29 30  1  0  0  0  0
 29 31  1  0  0  0  0
 22 32  1  0  0  0  0
 32 33  1  6  0  0  0
 33 34  1  0  0  0  0
 34 35  1  0  0  0  0
 35 36  1  1  0  0  0
 35 37  1  0  0  0  0
 37 38  1  6  0  0  0
 37 39  1  0  0  0  0
 39 40  1  0  0  0  0
 40 41  1  6  0  0  0
 41 42  1  0  0  0  0
 42 43  1  0  0  0  0
 42 44  2  0  0  0  0
 40 45  1  0  0  0  0
  7 45  1  0  0  0  0
 45 46  1  1  0  0  0
 45 47  1  0  0  0  0
 47 32  1  1  0  0  0
 35 47  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0282870

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(C)C(\C)=C\C(=O)O[C@@H]1[C@@H]2OC[C@@]3(C)[C@H]2[C@](C)([C@H](C[C@H]3O)OC(C)=O)[C@H]2C[C@H](OC(C)=O)[C@@]3(C)[C@@H](CC=C3[C@]12C)[C@H]1COC(=O)C1

> <INCHI_IDENTIFIER>
InChI=1S/C37H52O10/c1-18(2)19(3)12-30(42)47-33-31-32-34(6,17-44-31)26(40)15-28(46-21(5)39)37(32,9)25-14-27(45-20(4)38)35(7)23(22-13-29(41)43-16-22)10-11-24(35)36(25,33)8/h11-12,18,22-23,25-28,31-33,40H,10,13-17H2,1-9H3/b19-12+/t22-,23+,25+,26-,27+,28+,31-,32+,33-,34-,35+,36+,37+/m1/s1

> <INCHI_KEY>
GWHCYEGDOGSJQJ-QPCDDRSESA-N

> <FORMULA>
C37H52O10

> <MOLECULAR_WEIGHT>
656.813

> <EXACT_MASS>
656.356047874

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
99

> <JCHEM_AVERAGE_POLARIZABILITY>
70.63996958558296

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(1R,2R,4S,5S,6S,10R,11S,12R,15R,16R,18S,19R)-4,18-bis(acetyloxy)-16-hydroxy-1,5,10,15-tetramethyl-6-[(3S)-5-oxooxolan-3-yl]-13-oxapentacyclo[10.6.1.0^{2,10}.0^{5,9}.0^{15,19}]nonadec-8-en-11-yl (2E)-3,4-dimethylpent-2-enoate

> <JCHEM_LOGP>
3.3140311393333333

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
6

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
14.541007384500947

> <JCHEM_PKA_STRONGEST_BASIC>
-2.9995633700192847

> <JCHEM_POLAR_SURFACE_AREA>
134.66000000000003

> <JCHEM_REFRACTIVITY>
170.89390000000003

> <JCHEM_ROTATABLE_BOND_COUNT>
9

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
(1R,2R,4S,5S,6S,10R,11S,12R,15R,16R,18S,19R)-4,18-bis(acetyloxy)-16-hydroxy-1,5,10,15-tetramethyl-6-[(3S)-5-oxooxolan-3-yl]-13-oxapentacyclo[10.6.1.0^{2,10}.0^{5,9}.0^{15,19}]nonadec-8-en-11-yl (2E)-3,4-dimethylpent-2-enoate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 09-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   09-SEP-22         0                                  
HETATM    1  C   UNK     0       8.520   8.514   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       7.946   7.085   0.000  0.00  0.00           C+0
HETATM    3  O   UNK     0       6.422   6.867   0.000  0.00  0.00           O+0
HETATM    4  O   UNK     0       8.897   5.873   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       8.323   4.444   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       6.799   4.226   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       6.225   2.797   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       7.176   1.586   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       8.126   0.374   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       8.700   1.804   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       9.882   0.816   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      11.186   1.635   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      10.810   3.129   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      11.798   4.310   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      11.422   5.804   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0      12.726   6.623   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0      13.908   5.635   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0      15.401   6.011   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0      13.334   4.206   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       9.274   3.233   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       9.994   4.594   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       6.602   0.157   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0       7.553  -1.055   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0       6.979  -2.484   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0       5.454  -2.701   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0       7.929  -3.695   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       7.356  -5.124   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       5.831  -5.342   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       8.306  -6.336   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       9.831  -6.118   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       7.733  -7.765   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       5.077  -0.061   0.000  0.00  0.00           C+0
HETATM   33  O   UNK     0       4.219  -1.339   0.000  0.00  0.00           O+0
HETATM   34  C   UNK     0       2.738  -0.918   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0       2.680   0.621   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0       1.298  -0.057   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0       1.499   1.608   0.000  0.00  0.00           C+0
HETATM   38  O   UNK     0       0.053   1.078   0.000  0.00  0.00           O+0
HETATM   39  C   UNK     0       1.763   3.125   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0       3.209   3.655   0.000  0.00  0.00           C+0
HETATM   41  O   UNK     0       3.419   5.181   0.000  0.00  0.00           O+0
HETATM   42  C   UNK     0       2.202   6.125   0.000  0.00  0.00           C+0
HETATM   43  C   UNK     0       0.776   5.544   0.000  0.00  0.00           C+0
HETATM   44  O   UNK     0       2.412   7.651   0.000  0.00  0.00           O+0
HETATM   45  C   UNK     0       4.700   2.580   0.000  0.00  0.00           C+0
HETATM   46  C   UNK     0       5.068   4.075   0.000  0.00  0.00           C+0
HETATM   47  C   UNK     0       4.126   1.151   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3    4                                                  
CONECT    3    2                                                            
CONECT    4    2    5                                                       
CONECT    5    4    6   20                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8   45                                                  
CONECT    8    7    9   10   22                                             
CONECT    9    8                                                            
CONECT   10    8   11   20                                                  
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14   20                                                  
CONECT   14   13   15   19                                                  
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18   19                                                  
CONECT   18   17                                                            
CONECT   19   17   14                                                       
CONECT   20   13   10    5   21                                             
CONECT   21   20                                                            
CONECT   22    8   23   32                                                  
CONECT   23   22   24                                                       
CONECT   24   23   25   26                                                  
CONECT   25   24                                                            
CONECT   26   24   27                                                       
CONECT   27   26   28   29                                                  
CONECT   28   27                                                            
CONECT   29   27   30   31                                                  
CONECT   30   29                                                            
CONECT   31   29                                                            
CONECT   32   22   33   47                                                  
CONECT   33   32   34                                                       
CONECT   34   33   35                                                       
CONECT   35   34   36   37   47                                             
CONECT   36   35                                                            
CONECT   37   35   38   39                                                  
CONECT   38   37                                                            
CONECT   39   37   40                                                       
CONECT   40   39   41   45                                                  
CONECT   41   40   42                                                       
CONECT   42   41   43   44                                                  
CONECT   43   42                                                            
CONECT   44   42                                                            
CONECT   45   40    7   46   47                                             
CONECT   46   45                                                            
CONECT   47   45   32   35                                                  
MASTER        0    0    0    0    0    0    0    0   47    0  104    0
END

View in JSmol

Synonyms

Value	Source
(1R,2R,4S,5S,6S,10R,11S,12R,15R,16R,18S,19R)-4,18-Bis(acetyloxy)-16-hydroxy-1,5,10,15-tetramethyl-6-[(3S)-5-oxooxolan-3-yl]-13-oxapentacyclo[10.6.1.0,.0,.0,]nonadec-8-en-11-yl (2E)-3,4-dimethylpent-2-enoic acid	Generator

Chemical Formula

C₃₇H₅₂O₁₀

Average Mass

656.8130 Da

Monoisotopic Mass

656.35605 Da

IUPAC Name

(1R,2R,4S,5S,6S,10R,11S,12R,15R,16R,18S,19R)-4,18-bis(acetyloxy)-16-hydroxy-1,5,10,15-tetramethyl-6-[(3S)-5-oxooxolan-3-yl]-13-oxapentacyclo[10.6.1.0^{2,10}.0^{5,9}.0^{15,19}]nonadec-8-en-11-yl (2E)-3,4-dimethylpent-2-enoate

Traditional Name

CAS Registry Number

Not Available

SMILES

CC(C)C(\C)=C\C(=O)O[C@@H]1[C@@H]2OC[C@@]3(C)[C@H]2[C@](C)([C@H](C[C@H]3O)OC(C)=O)[C@H]2C[C@H](OC(C)=O)[C@@]3(C)[C@@H](CC=C3[C@]12C)[C@H]1COC(=O)C1

InChI Identifier

InChI=1S/C37H52O10/c1-18(2)19(3)12-30(42)47-33-31-32-34(6,17-44-31)26(40)15-28(46-21(5)39)37(32,9)25-14-27(45-20(4)38)35(7)23(22-13-29(41)43-16-22)10-11-24(35)36(25,33)8/h11-12,18,22-23,25-28,31-33,40H,10,13-17H2,1-9H3/b19-12+/t22-,23+,25+,26-,27+,28+,31-,32+,33-,34-,35+,36+,37+/m1/s1

InChI Key

GWHCYEGDOGSJQJ-QPCDDRSESA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as limonoids. These are highly oxygenated, modified terpenoids with a prototypical structure either containing or derived from a precursor with a 4,4,8-trimethyl-17-furanylsteroid skeleton. All naturally occurring citrus limonoids contain a furan ring attached to the D-ring, at C-17, as well as oxygen containing functional groups at C-3, C-4, C-7, C-16 and C-17.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Triterpenoids

Direct Parent

Limonoids

Alternative Parents

Substituents

Limonoid skeleton
Steroid ester
Steroid
Tetracarboxylic acid or derivatives
Naphthofuran
Fatty acid ester
Fatty acyl
Gamma butyrolactone
Alpha,beta-unsaturated carboxylic ester
Enoate ester
Tetrahydrofuran
Cyclic alcohol
Secondary alcohol
Lactone
Carboxylic acid ester
Oxacycle
Organoheterocyclic compound
Ether
Dialkyl ether
Carboxylic acid derivative
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Alcohol
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.31	ChemAxon
pKa (Strongest Acidic)	14.54	ChemAxon
pKa (Strongest Basic)	-3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	134.66 Å²	ChemAxon
Rotatable Bond Count	9	ChemAxon
Refractivity	170.89 m³·mol⁻¹	ChemAxon
Polarizability	70.64 Å³	ChemAxon
Number of Rings	6	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

162958967

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (1r,2r,4s,5s,6s,10r,11s,12r,15r,16r,18s,19r)-4,18-bis(acetyloxy)-16-hydroxy-1,5,10,15-tetramethyl-6-[(3s)-5-oxooxolan-3-yl]-13-oxapentacyclo[10.6.1.0²,¹⁰.0⁵,⁹.0¹⁵,¹⁹]nonadec-8-en-11-yl (2e)-3,4-dimethylpent-2-enoate (NP0282870)

MOL for NP0282870 ((1r,2r,4s,5s,6s,10r,11s,12r,15r,16r,18s,19r)-4,18-bis(acetyloxy)-16-hydroxy-1,5,10,15-tetramethyl-6-[(3s)-5-oxooxolan-3-yl]-13-oxapentacyclo[10.6.1.0²,¹⁰.0⁵,⁹.0¹⁵,¹⁹]nonadec-8-en-11-yl (2e)-3,4-dimethylpent-2-enoate)

3D MOL for NP0282870 ((1r,2r,4s,5s,6s,10r,11s,12r,15r,16r,18s,19r)-4,18-bis(acetyloxy)-16-hydroxy-1,5,10,15-tetramethyl-6-[(3s)-5-oxooxolan-3-yl]-13-oxapentacyclo[10.6.1.0²,¹⁰.0⁵,⁹.0¹⁵,¹⁹]nonadec-8-en-11-yl (2e)-3,4-dimethylpent-2-enoate)

3D SDF for NP0282870 ((1r,2r,4s,5s,6s,10r,11s,12r,15r,16r,18s,19r)-4,18-bis(acetyloxy)-16-hydroxy-1,5,10,15-tetramethyl-6-[(3s)-5-oxooxolan-3-yl]-13-oxapentacyclo[10.6.1.0²,¹⁰.0⁵,⁹.0¹⁵,¹⁹]nonadec-8-en-11-yl (2e)-3,4-dimethylpent-2-enoate)

3D-SDF for NP0282870 ((1r,2r,4s,5s,6s,10r,11s,12r,15r,16r,18s,19r)-4,18-bis(acetyloxy)-16-hydroxy-1,5,10,15-tetramethyl-6-[(3s)-5-oxooxolan-3-yl]-13-oxapentacyclo[10.6.1.0²,¹⁰.0⁵,⁹.0¹⁵,¹⁹]nonadec-8-en-11-yl (2e)-3,4-dimethylpent-2-enoate)

PDB for NP0282870 ((1r,2r,4s,5s,6s,10r,11s,12r,15r,16r,18s,19r)-4,18-bis(acetyloxy)-16-hydroxy-1,5,10,15-tetramethyl-6-[(3s)-5-oxooxolan-3-yl]-13-oxapentacyclo[10.6.1.0²,¹⁰.0⁵,⁹.0¹⁵,¹⁹]nonadec-8-en-11-yl (2e)-3,4-dimethylpent-2-enoate)

3D PDB for NP0282870 ((1r,2r,4s,5s,6s,10r,11s,12r,15r,16r,18s,19r)-4,18-bis(acetyloxy)-16-hydroxy-1,5,10,15-tetramethyl-6-[(3s)-5-oxooxolan-3-yl]-13-oxapentacyclo[10.6.1.0²,¹⁰.0⁵,⁹.0¹⁵,¹⁹]nonadec-8-en-11-yl (2e)-3,4-dimethylpent-2-enoate)

SMILES for NP0282870 ((1r,2r,4s,5s,6s,10r,11s,12r,15r,16r,18s,19r)-4,18-bis(acetyloxy)-16-hydroxy-1,5,10,15-tetramethyl-6-[(3s)-5-oxooxolan-3-yl]-13-oxapentacyclo[10.6.1.0²,¹⁰.0⁵,⁹.0¹⁵,¹⁹]nonadec-8-en-11-yl (2e)-3,4-dimethylpent-2-enoate)

INCHI for NP0282870 ((1r,2r,4s,5s,6s,10r,11s,12r,15r,16r,18s,19r)-4,18-bis(acetyloxy)-16-hydroxy-1,5,10,15-tetramethyl-6-[(3s)-5-oxooxolan-3-yl]-13-oxapentacyclo[10.6.1.0²,¹⁰.0⁵,⁹.0¹⁵,¹⁹]nonadec-8-en-11-yl (2e)-3,4-dimethylpent-2-enoate)

Structure for NP0282870 ((1r,2r,4s,5s,6s,10r,11s,12r,15r,16r,18s,19r)-4,18-bis(acetyloxy)-16-hydroxy-1,5,10,15-tetramethyl-6-[(3s)-5-oxooxolan-3-yl]-13-oxapentacyclo[10.6.1.0²,¹⁰.0⁵,⁹.0¹⁵,¹⁹]nonadec-8-en-11-yl (2e)-3,4-dimethylpent-2-enoate)

3D Structure for NP0282870 ((1r,2r,4s,5s,6s,10r,11s,12r,15r,16r,18s,19r)-4,18-bis(acetyloxy)-16-hydroxy-1,5,10,15-tetramethyl-6-[(3s)-5-oxooxolan-3-yl]-13-oxapentacyclo[10.6.1.0²,¹⁰.0⁵,⁹.0¹⁵,¹⁹]nonadec-8-en-11-yl (2e)-3,4-dimethylpent-2-enoate)