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Record Information
Version2.0
Created at2022-09-09 08:59:07 UTC
Updated at2022-09-09 08:59:07 UTC
NP-MRD IDNP0282231
Secondary Accession NumbersNone
Natural Product Identification
Common Name(2r,5r,6s,9r,11s,14s,15r)-2,6,10,10,14-pentamethyl-19-azahexacyclo[15.6.1.0²,¹⁵.0⁵,¹⁴.0⁶,¹¹.0²⁰,²⁴]tetracosa-1(24),17,20,22-tetraen-9-ol
DescriptionPetromindole belongs to the class of organic compounds known as phenanthrenes and derivatives. These are polycyclic compounds containing a phenanthrene moiety, which is a tricyclic aromatic compound with three non-linearly fused benzene. (2r,5r,6s,9r,11s,14s,15r)-2,6,10,10,14-pentamethyl-19-azahexacyclo[15.6.1.0²,¹⁵.0⁵,¹⁴.0⁶,¹¹.0²⁰,²⁴]tetracosa-1(24),17,20,22-tetraen-9-ol was first documented in 2003 (PMID: 15369342). Based on a literature review very few articles have been published on Petromindole (PMID: 29336573).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC28H39NO
Average Mass405.6260 Da
Monoisotopic Mass405.30316 Da
IUPAC Name(2R,5R,6S,9R,11S,14S,15R)-2,6,10,10,14-pentamethyl-19-azahexacyclo[15.6.1.0^{2,15}.0^{5,14}.0^{6,11}.0^{20,24}]tetracosa-1(24),17,20,22-tetraen-9-ol
Traditional Name(2R,5R,6S,9R,11S,14S,15R)-2,6,10,10,14-pentamethyl-19-azahexacyclo[15.6.1.0^{2,15}.0^{5,14}.0^{6,11}.0^{20,24}]tetracosa-1(24),17,20,22-tetraen-9-ol
CAS Registry NumberNot Available
SMILES
CC1(C)[C@H](O)CC[C@]2(C)[C@@H]1CC[C@@]1(C)[C@H]2CC[C@]2(C)[C@@H]1CC1=CNC3=CC=CC2=C13
InChI Identifier
InChI=1S/C28H39NO/c1-25(2)20-9-13-28(5)21(27(20,4)14-11-23(25)30)10-12-26(3)18-7-6-8-19-24(18)17(16-29-19)15-22(26)28/h6-8,16,20-23,29-30H,9-15H2,1-5H3/t20-,21+,22+,23-,26+,27-,28+/m1/s1
InChI KeyDRNNQNUPQAJBQZ-DIADYQGESA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of OriginNot Available
Chemical Taxonomy
Description Belongs to the class of organic compounds known as phenanthrenes and derivatives. These are polycyclic compounds containing a phenanthrene moiety, which is a tricyclic aromatic compound with three non-linearly fused benzene.
KingdomOrganic compounds
Super ClassBenzenoids
ClassPhenanthrenes and derivatives
Sub ClassNot Available
Direct ParentPhenanthrenes and derivatives
Alternative Parents
Substituents
  • Phenanthrene
  • 3-alkylindole
  • Indole
  • Indole or derivatives
  • Isoindole or derivatives
  • Cyclic alcohol
  • Pyrrole
  • Heteroaromatic compound
  • Secondary alcohol
  • Organoheterocyclic compound
  • Azacycle
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organonitrogen compound
  • Organopnictogen compound
  • Organic oxygen compound
  • Organic nitrogen compound
  • Alcohol
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP6.33ChemAxon
pKa (Strongest Acidic)17.52ChemAxon
pKa (Strongest Basic)-0.84ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area36.02 ŲChemAxon
Rotatable Bond Count0ChemAxon
Refractivity123.48 m³·mol⁻¹ChemAxon
Polarizability49.39 ųChemAxon
Number of Rings6ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00026510
Chemspider ID154472
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound177411
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Dethe DH, Sau SK: Biomimetic Enantioselective Total Synthesis of (-)-Petromindole. Org Lett. 2018 Feb 2;20(3):632-635. doi: 10.1021/acs.orglett.7b03768. Epub 2018 Jan 16. [PubMed:29336573 ]
  2. Xiong Q, Zhu X, Wilson WK, Ganesan A, Matsuda SP: Enzymatic synthesis of an indole diterpene by an oxidosqualene cyclase: mechanistic, biosynthetic, and phylogenetic implications. J Am Chem Soc. 2003 Jul 30;125(30):9002-3. doi: 10.1021/ja036322v. [PubMed:15369342 ]
  3. LOTUS database [Link]