NP-MRD: Showing NP-Card for n-[(10e)-5,8-dihydroxy-3-isopropyl-7-(2-methylpropyl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(methylamino)-3-phenylpropanimidic acid (NP0281196)

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Record Information

Version

2.0

Created at

2022-09-09 07:23:50 UTC

Updated at

2022-09-09 07:23:51 UTC

NP-MRD ID

NP0281196

Secondary Accession Numbers

None

Natural Product Identification

Common Name

n-[(10e)-5,8-dihydroxy-3-isopropyl-7-(2-methylpropyl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(methylamino)-3-phenylpropanimidic acid

Description

n-[(10e)-5,8-dihydroxy-3-isopropyl-7-(2-methylpropyl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(methylamino)-3-phenylpropanimidic acid is found in Ziziphus jujuba.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309092209232D          

 38 40  0  0  0  0            999 V2000
    6.9904    4.6891    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

     RDKit          3D

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M  END


  Mrv1652309092209232D          

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    3.8871    1.5494    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6694    1.9040    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5748    2.7235    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2372    3.2152    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8177    3.0514    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
  5 10  1  0  0  0  0
  3 11  1  0  0  0  0
 11 12  1  0  0  0  0
 11 13  2  0  0  0  0
 13 14  1  4  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 15 17  2  0  0  0  0
 17 18  1  4  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 20 22  1  0  0  0  0
 18 23  1  0  0  0  0
 23 24  1  0  0  0  0
 23 25  2  0  0  0  0
 25 26  1  4  0  0  0
 26 27  2  0  0  0  0
 27 28  1  0  0  0  0
 28 29  2  0  0  0  0
 29 30  1  0  0  0  0
 30 31  2  0  0  0  0
 31 32  1  0  0  0  0
 32 33  2  0  0  0  0
 28 33  1  0  0  0  0
 31 34  1  0  0  0  0
 34 35  1  0  0  0  0
 14 35  1  0  0  0  0
 35 36  1  0  0  0  0
 36 37  1  0  0  0  0
 36 38  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0281196

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CNC(CC1=CC=CC=C1)C(O)=NC1C(OC2=CC=C(C=C2)\C=C/N=C(O)C(CC(C)C)N=C1O)C(C)C

> <INCHI_IDENTIFIER>
InChI=1S/C30H40N4O4/c1-19(2)17-25-28(35)32-16-15-21-11-13-23(14-12-21)38-27(20(3)4)26(30(37)33-25)34-29(36)24(31-5)18-22-9-7-6-8-10-22/h6-16,19-20,24-27,31H,17-18H2,1-5H3,(H,32,35)(H,33,37)(H,34,36)/b16-15-

> <INCHI_KEY>
RZPGHGRAYXXUEA-NXVVXOECSA-N

> <FORMULA>
C30H40N4O4

> <MOLECULAR_WEIGHT>
520.674

> <EXACT_MASS>
520.304955784

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
78

> <JCHEM_AVERAGE_POLARIZABILITY>
56.467980615503066

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
4

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
N-[(10E)-5,8-dihydroxy-7-(2-methylpropyl)-3-(propan-2-yl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(methylamino)-3-phenylpropanimidic acid

> <JCHEM_LOGP>
-1.456013492934902

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA>
-4.200706238904821

> <JCHEM_PKA_STRONGEST_ACIDIC>
-9.368099358121569

> <JCHEM_PKA_STRONGEST_BASIC>
14.971440409822975

> <JCHEM_POLAR_SURFACE_AREA>
119.03

> <JCHEM_REFRACTIVITY>
149.06400000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
8

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
N-[(10E)-5,8-dihydroxy-3-isopropyl-7-(2-methylpropyl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(methylamino)-3-phenylpropanimidic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 09-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   09-SEP-22         0                                  
HETATM    1  C   UNK     0      13.049   8.753   0.000  0.00  0.00           C+0
HETATM    2  N   UNK     0      12.362   7.375   0.000  0.00  0.00           N+0
HETATM    3  C   UNK     0      13.212   6.091   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      14.749   6.185   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      15.599   4.901   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      17.137   4.995   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      17.987   3.711   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      17.300   2.333   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      15.763   2.239   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      14.913   3.523   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      12.525   4.712   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0      13.375   3.428   0.000  0.00  0.00           O+0
HETATM   13  N   UNK     0      10.988   4.618   0.000  0.00  0.00           N+0
HETATM   14  C   UNK     0      10.301   3.240   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      11.510   2.160   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0      12.784   3.025   0.000  0.00  0.00           O+0
HETATM   17  N   UNK     0      12.059   0.660   0.000  0.00  0.00           N+0
HETATM   18  C   UNK     0      11.892  -0.886   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      13.349  -1.384   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      14.509  -0.370   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      14.211   1.141   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      15.966  -0.868   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      11.079  -2.210   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0      12.182  -3.285   0.000  0.00  0.00           O+0
HETATM   25  N   UNK     0       9.775  -3.058   0.000  0.00  0.00           N+0
HETATM   26  C   UNK     0       8.218  -3.263   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       6.702  -2.815   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       5.705  -1.538   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       4.501  -0.520   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       4.777   1.003   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       6.196   1.670   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       7.338   0.643   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0       7.115  -0.877   0.000  0.00  0.00           C+0
HETATM   34  O   UNK     0       7.256   2.892   0.000  0.00  0.00           O+0
HETATM   35  C   UNK     0       8.716   3.554   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0       8.540   5.084   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0       9.776   6.002   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0       7.126   5.696   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   11                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6   10                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9    5                                                       
CONECT   11    3   12   13                                                  
CONECT   12   11                                                            
CONECT   13   11   14                                                       
CONECT   14   13   15   35                                                  
CONECT   15   14   16   17                                                  
CONECT   16   15                                                            
CONECT   17   15   18                                                       
CONECT   18   17   19   23                                                  
CONECT   19   18   20                                                       
CONECT   20   19   21   22                                                  
CONECT   21   20                                                            
CONECT   22   20                                                            
CONECT   23   18   24   25                                                  
CONECT   24   23                                                            
CONECT   25   23   26                                                       
CONECT   26   25   27                                                       
CONECT   27   26   28                                                       
CONECT   28   27   29   33                                                  
CONECT   29   28   30                                                       
CONECT   30   29   31                                                       
CONECT   31   30   32   34                                                  
CONECT   32   31   33                                                       
CONECT   33   32   28                                                       
CONECT   34   31   35                                                       
CONECT   35   34   14   36                                                  
CONECT   36   35   37   38                                                  
CONECT   37   36                                                            
CONECT   38   36                                                            
MASTER        0    0    0    0    0    0    0    0   38    0   80    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₃₀H₄₀N₄O₄

Average Mass

520.6740 Da

Monoisotopic Mass

520.30496 Da

IUPAC Name

N-[(10E)-5,8-dihydroxy-7-(2-methylpropyl)-3-(propan-2-yl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(methylamino)-3-phenylpropanimidic acid

Traditional Name

N-[(10E)-5,8-dihydroxy-3-isopropyl-7-(2-methylpropyl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(methylamino)-3-phenylpropanimidic acid

CAS Registry Number

Not Available

SMILES

CNC(CC1=CC=CC=C1)C(O)=NC1C(OC2=CC=C(C=C2)\C=C/N=C(O)C(CC(C)C)N=C1O)C(C)C

InChI Identifier

InChI=1S/C30H40N4O4/c1-19(2)17-25-28(35)32-16-15-21-11-13-23(14-12-21)38-27(20(3)4)26(30(37)33-25)34-29(36)24(31-5)18-22-9-7-6-8-10-22/h6-16,19-20,24-27,31H,17-18H2,1-5H3,(H,32,35)(H,33,37)(H,34,36)/b16-15-

InChI Key

RZPGHGRAYXXUEA-NXVVXOECSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Ziziphus jujuba	LOTUS Database	35616633

Chemical Taxonomy

Classification

Not classified

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	-1.5	ChemAxon
pKa (Strongest Acidic)	-9.4	ChemAxon
pKa (Strongest Basic)	14.97	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	8	ChemAxon
Hydrogen Donor Count	4	ChemAxon
Polar Surface Area	119.03 Å²	ChemAxon
Rotatable Bond Count	8	ChemAxon
Refractivity	149.06 m³·mol⁻¹	ChemAxon
Polarizability	56.47 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for n-[(10e)-5,8-dihydroxy-3-isopropyl-7-(2-methylpropyl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(methylamino)-3-phenylpropanimidic acid (NP0281196)

MOL for NP0281196 (n-[(10e)-5,8-dihydroxy-3-isopropyl-7-(2-methylpropyl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(methylamino)-3-phenylpropanimidic acid)

3D MOL for NP0281196 (n-[(10e)-5,8-dihydroxy-3-isopropyl-7-(2-methylpropyl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(methylamino)-3-phenylpropanimidic acid)

3D SDF for NP0281196 (n-[(10e)-5,8-dihydroxy-3-isopropyl-7-(2-methylpropyl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(methylamino)-3-phenylpropanimidic acid)

3D-SDF for NP0281196 (n-[(10e)-5,8-dihydroxy-3-isopropyl-7-(2-methylpropyl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(methylamino)-3-phenylpropanimidic acid)

PDB for NP0281196 (n-[(10e)-5,8-dihydroxy-3-isopropyl-7-(2-methylpropyl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(methylamino)-3-phenylpropanimidic acid)

3D PDB for NP0281196 (n-[(10e)-5,8-dihydroxy-3-isopropyl-7-(2-methylpropyl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(methylamino)-3-phenylpropanimidic acid)

SMILES for NP0281196 (n-[(10e)-5,8-dihydroxy-3-isopropyl-7-(2-methylpropyl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(methylamino)-3-phenylpropanimidic acid)

INCHI for NP0281196 (n-[(10e)-5,8-dihydroxy-3-isopropyl-7-(2-methylpropyl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(methylamino)-3-phenylpropanimidic acid)

Structure for NP0281196 (n-[(10e)-5,8-dihydroxy-3-isopropyl-7-(2-methylpropyl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(methylamino)-3-phenylpropanimidic acid)

3D Structure for NP0281196 (n-[(10e)-5,8-dihydroxy-3-isopropyl-7-(2-methylpropyl)-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),5,8,10,12,15-hexaen-4-yl]-2-(methylamino)-3-phenylpropanimidic acid)