NP-MRD: Showing NP-Card for (3r,7s,11s)-3-hydroxy-3,7,11,15-tetramethylhexadecyl benzoate (NP0280451)

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Record Information

Version

2.0

Created at

2022-09-09 06:15:23 UTC

Updated at

2022-09-09 06:15:23 UTC

NP-MRD ID

NP0280451

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(3r,7s,11s)-3-hydroxy-3,7,11,15-tetramethylhexadecyl benzoate

Description

(3R,7S,11S)-3-hydroxy-3,7,11,15-tetramethylhexadecyl benzoate belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units. Based on a literature review very few articles have been published on (3R,7S,11S)-3-hydroxy-3,7,11,15-tetramethylhexadecyl benzoate.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309092208152D          

 30 30  0  0  1  0            999 V2000
    4.2868  -10.7250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013  -11.1375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013  -11.9625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158  -10.7250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302  -11.1375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447  -10.7250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592  -11.1375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    7.8592  -11.9625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737  -10.7250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2881  -11.1375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0026  -10.7250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7171  -11.1375    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   10.7171  -11.9625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4315  -10.7250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1460  -11.1375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.8605  -10.7250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.5749  -11.1375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   13.1624  -11.8520    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.9874  -10.4230    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.2894  -11.5500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.0039  -11.1375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.7184  -11.5500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   16.4328  -11.1375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.4328  -10.3125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   17.1473  -11.5500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.8618  -11.1375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.5762  -11.5500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.5762  -12.3750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.8618  -12.7875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.1473  -12.3750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
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  7  9  1  0  0  0  0
  9 10  1  0  0  0  0
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 25 30  1  0  0  0  0
M  END

     RDKit          3D

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M  END


  Mrv1652309092208152D          

 30 30  0  0  1  0            999 V2000
    4.2868  -10.7250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013  -11.1375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  END
> <DATABASE_ID>
NP0280451

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(C)CCC[C@H](C)CCC[C@H](C)CCC[C@@](C)(O)CCOC(=O)C1=CC=CC=C1

> <INCHI_IDENTIFIER>
InChI=1S/C27H46O3/c1-22(2)12-9-13-23(3)14-10-15-24(4)16-11-19-27(5,29)20-21-30-26(28)25-17-7-6-8-18-25/h6-8,17-18,22-24,29H,9-16,19-21H2,1-5H3/t23-,24-,27+/m0/s1

> <INCHI_KEY>
GAMTYFUXKUANAW-NLJOTIRTSA-N

> <FORMULA>
C27H46O3

> <MOLECULAR_WEIGHT>
418.662

> <EXACT_MASS>
418.344695341

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
76

> <JCHEM_AVERAGE_POLARIZABILITY>
52.69395522954291

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(3R,7S,11S)-3-hydroxy-3,7,11,15-tetramethylhexadecyl benzoate

> <JCHEM_LOGP>
8.317567198999999

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
14.98508299892801

> <JCHEM_PKA_STRONGEST_BASIC>
-2.8053246962688876

> <JCHEM_POLAR_SURFACE_AREA>
46.53

> <JCHEM_REFRACTIVITY>
127.07879999999997

> <JCHEM_ROTATABLE_BOND_COUNT>
17

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
(3R,7S,11S)-3-hydroxy-3,7,11,15-tetramethylhexadecyl benzoate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 09-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   09-SEP-22         0                                  
HETATM    1  C   UNK     0       8.002 -20.020   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       9.336 -20.790   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       9.336 -22.330   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      10.669 -20.020   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      12.003 -20.790   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      13.337 -20.020   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      14.670 -20.790   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      14.670 -22.330   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      16.004 -20.020   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      17.338 -20.790   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      18.672 -20.020   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      20.005 -20.790   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      20.005 -22.330   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      21.339 -20.020   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      22.673 -20.790   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      24.006 -20.020   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      25.340 -20.790   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      24.570 -22.124   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0      26.110 -19.456   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0      26.674 -21.560   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      28.007 -20.790   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0      29.341 -21.560   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0      30.675 -20.790   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0      30.675 -19.250   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0      32.008 -21.560   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      33.342 -20.790   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      34.676 -21.560   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      34.676 -23.100   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      33.342 -23.870   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      32.008 -23.100   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3    4                                                  
CONECT    3    2                                                            
CONECT    4    2    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8    9                                                  
CONECT    8    7                                                            
CONECT    9    7   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13   14                                                  
CONECT   13   12                                                            
CONECT   14   12   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18   19   20                                             
CONECT   18   17                                                            
CONECT   19   17                                                            
CONECT   20   17   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24   25                                                  
CONECT   24   23                                                            
CONECT   25   23   26   30                                                  
CONECT   26   25   27                                                       
CONECT   27   26   28                                                       
CONECT   28   27   29                                                       
CONECT   29   28   30                                                       
CONECT   30   29   25                                                       
MASTER        0    0    0    0    0    0    0    0   30    0   60    0
END

View in JSmol

Synonyms

Value	Source
(3R,7S,11S)-3-Hydroxy-3,7,11,15-tetramethylhexadecyl benzoic acid	Generator

Chemical Formula

C₂₇H₄₆O₃

Average Mass

418.6620 Da

Monoisotopic Mass

418.34470 Da

IUPAC Name

(3R,7S,11S)-3-hydroxy-3,7,11,15-tetramethylhexadecyl benzoate

Traditional Name

(3R,7S,11S)-3-hydroxy-3,7,11,15-tetramethylhexadecyl benzoate

CAS Registry Number

Not Available

SMILES

CC(C)CCC[C@H](C)CCC[C@H](C)CCC[C@@](C)(O)CCOC(=O)C1=CC=CC=C1

InChI Identifier

InChI=1S/C27H46O3/c1-22(2)12-9-13-23(3)14-10-15-24(4)16-11-19-27(5,29)20-21-30-26(28)25-17-7-6-8-18-25/h6-8,17-18,22-24,29H,9-16,19-21H2,1-5H3/t23-,24-,27+/m0/s1

InChI Key

GAMTYFUXKUANAW-NLJOTIRTSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Diterpenoids

Direct Parent

Diterpenoids

Alternative Parents

Substituents

Diterpenoid
Benzoate ester
Benzoic acid or derivatives
Benzoyl
Benzenoid
Monocyclic benzene moiety
Tertiary alcohol
Carboxylic acid ester
Monocarboxylic acid or derivatives
Carboxylic acid derivative
Hydrocarbon derivative
Organooxygen compound
Organic oxygen compound
Alcohol
Organic oxide
Aromatic homomonocyclic compound

Molecular Framework

Aromatic homomonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	8.32	ChemAxon
pKa (Strongest Acidic)	14.99	ChemAxon
pKa (Strongest Basic)	-2.8	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	46.53 Å²	ChemAxon
Rotatable Bond Count	17	ChemAxon
Refractivity	127.08 m³·mol⁻¹	ChemAxon
Polarizability	52.69 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00057622

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

163188054

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (3r,7s,11s)-3-hydroxy-3,7,11,15-tetramethylhexadecyl benzoate (NP0280451)

MOL for NP0280451 ((3r,7s,11s)-3-hydroxy-3,7,11,15-tetramethylhexadecyl benzoate)

3D MOL for NP0280451 ((3r,7s,11s)-3-hydroxy-3,7,11,15-tetramethylhexadecyl benzoate)

3D SDF for NP0280451 ((3r,7s,11s)-3-hydroxy-3,7,11,15-tetramethylhexadecyl benzoate)

3D-SDF for NP0280451 ((3r,7s,11s)-3-hydroxy-3,7,11,15-tetramethylhexadecyl benzoate)

PDB for NP0280451 ((3r,7s,11s)-3-hydroxy-3,7,11,15-tetramethylhexadecyl benzoate)

3D PDB for NP0280451 ((3r,7s,11s)-3-hydroxy-3,7,11,15-tetramethylhexadecyl benzoate)

SMILES for NP0280451 ((3r,7s,11s)-3-hydroxy-3,7,11,15-tetramethylhexadecyl benzoate)

INCHI for NP0280451 ((3r,7s,11s)-3-hydroxy-3,7,11,15-tetramethylhexadecyl benzoate)

Structure for NP0280451 ((3r,7s,11s)-3-hydroxy-3,7,11,15-tetramethylhexadecyl benzoate)

3D Structure for NP0280451 ((3r,7s,11s)-3-hydroxy-3,7,11,15-tetramethylhexadecyl benzoate)