Np mrd loader

Record Information
Version2.0
Created at2022-09-09 04:25:19 UTC
Updated at2024-09-03 04:16:30 UTC
NP-MRD IDNP0279139
Natural Product DOIhttps://doi.org/10.57994/0689
Secondary Accession NumbersNone
Natural Product Identification
Common Nameabscisic acid
Description(+)-Abscisic acid, also known as ABA or abscisin II, belongs to the class of organic compounds known as abscisic acids and derivatives. abscisic acid is found in Alternaria brassicae, Artemisia capillaris, Ascophyllum nodosum, Botrytis cinerea, Rosisphaerella rosicola, Cinnamomum subavenium, Curvularia lunata, Cuscuta pentagona, Dioscorea japonica, Ipomoea nil, Isatis tinctoria, Macaranga triloba, Machilus zuihoensis, Nicotiana tabacum, Pisum sativum, Prunus domestica, Prunus persica, Robinia pseudoacacia, Solanum lycopersicum, Vicia faba, Vigna unguiculata, Xylocarpus granatum, Zanthoxylum simulans and Zea mays. abscisic acid was first documented in 1963 (PMID: 17741533). These are terpene compounds containing the abscisic acid moiety, which is characterized by a 3-methylpenta-2,4-dienoic acid attached to the C1 carbon of a 4-oxocyclohex-2-ene moiety (+)-abscisic acid is an extremely weak basic (essentially neutral) compound (based on its pKa) (PMID: 12114582) (PMID: 10915053) (PMID: 16169217) (PMID: 17582774).
Structure
Thumb
Synonyms
ValueSource
(+)-(S)-ABAChEBI
(+)-S-ABAChEBI
(7E,9Z)-(6S)-6-Hydroxy-3-oxo-11-apo-epsilon-caroten-11-Oic acidChEBI
(S)-(+)-Abscisic acidChEBI
2-cis,4-trans-Abscisic acidChEBI
ABAChEBI
Abscisic acidChEBI
Abscisin IIChEBI
(7E,9Z)-(6S)-6-Hydroxy-3-oxo-11-apo-epsilon-caroten-11-OateGenerator
(S)-(+)-AbscisateGenerator
2-cis,4-trans-AbscisateGenerator
AbscisateGenerator
(+)-AbscisateGenerator
Abscisic acid, (R)-isomerMeSH
Abscisic acid, (+,-)-isomerMeSH
Abscisic acid, (e,Z)-(+,-)-isomerMeSH
AbscissinsMeSH
Abscisic acid, (Z,e)-isomerMeSH
Abscisic acid monoammonium salt, (R)-isomerMeSH
Abscisic acid, (e,e)-(+-)-isomerMeSH
Abscissic acidMeSH
(+)-Abscisic acidKEGG
(+)-(S)-Abscisic acidPhytoBank
(+)-(cis,trans)-Abscisic acidPhytoBank
(+)-ABAPhytoBank
(+)-Abscisin IIPhytoBank
(+)-cis-Abscisic acidPhytoBank
(S)-(+)-ABAPhytoBank
(S)-ABAPhytoBank
(Z,E)-Abscisic acidPhytoBank
cis,trans-Abscisic acidPhytoBank
cis-Abscisic acidPhytoBank
cis-trans-(+)-Abscisic acidPhytoBank
Chemical FormulaC15H20O4
Average Mass264.3169 Da
Monoisotopic Mass264.13616 Da
IUPAC Name(2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid
Traditional Nameabscisic acid
CAS Registry NumberNot Available
SMILES
C\C(\C=C\[C@@]1(O)C(C)=CC(=O)CC1(C)C)=C\C(O)=O
InChI Identifier
InChI=1S/C15H20O4/c1-10(7-13(17)18)5-6-15(19)11(2)8-12(16)9-14(15,3)4/h5-8,19H,9H2,1-4H3,(H,17,18)/b6-5+,10-7-/t15-/m1/s1
InChI KeyJLIDBLDQVAYHNE-YKALOCIXSA-N
Experimental Spectra
Spectrum TypeDescriptionDepositor EmailDepositor OrganizationDepositorDeposition DateView
HMBC NMR[1H, 13C] NMR Spectrum (2D, 500 MHz, CDCL3, experimental)[email protected]Not AvailableNot Available2023-06-14View Spectrum
COSY NMR[1H, 1H] NMR Spectrum (2D, 500 MHz, CDCL3, experimental)[email protected]Not AvailableNot Available2023-06-14View Spectrum
HSQC NMR[1H, 13C] NMR Spectrum (2D, 500 MHz, CDCL3, experimental)[email protected]Not AvailableNot Available2023-06-14View Spectrum
HSQC NMR[1H, 13C] NMR Spectrum (2D, 500 MHz, CDCL3, experimental)[email protected]Not AvailableNot Available2023-06-14View Spectrum
HOMO2DJ NMR[1H, 1H] NMR Spectrum (2D, 500 MHz, CDCL3, experimental)[email protected]Not AvailableNot Available2023-06-14View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, CDCL3, experimental)[email protected]Not AvailableNot Available2023-06-14View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, CDCL3, experimental)[email protected]Not AvailableNot Available2023-06-14View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, CDCl3, experimental)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 100.40 MHz, CDCl3, experimental)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Alternaria brassicaeLOTUS Database
Artemisia capillarisLOTUS Database
Ascophyllum nodosumLOTUS Database
Botrytis cinereaLOTUS Database
Cercospora rosicolaLOTUS Database
Cinnamomum subaveniumLOTUS Database
Curvularia lunataLOTUS Database
Cuscuta pentagonaLOTUS Database
Dioscorea japonicaLOTUS Database
Ipomoea nilLOTUS Database
Isatis tinctoriaLOTUS Database
Macaranga trilobaLOTUS Database
Machilus zuihoensisLOTUS Database
Nicotiana tabacumLOTUS Database
Pisum sativumLOTUS Database
Prunus domesticaLOTUS Database
Prunus persicaLOTUS Database
Robinia pseudoacaciaLOTUS Database
Solanum lycopersicumLOTUS Database
Vicia fabaLOTUS Database
Vigna unguiculataLOTUS Database
Xylocarpus granatumLOTUS Database
Zanthoxylum simulansLOTUS Database
Zea maysLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as abscisic acids and derivatives. These are terpene compounds containing the abscisic acid moiety, which is characterized by a 3-methylpenta-2,4-dienoic acid attached to the C1 carbon of a 4-oxocyclohex-2-ene moiety.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassSesquiterpenoids
Direct ParentAbscisic acids and derivatives
Alternative Parents
Substituents
  • Abscisic acid
  • Medium-chain fatty acid
  • Branched fatty acid
  • Cyclohexenone
  • Hydroxy fatty acid
  • Methyl-branched fatty acid
  • Fatty acyl
  • Fatty acid
  • Unsaturated fatty acid
  • Tertiary alcohol
  • Ketone
  • Cyclic ketone
  • Monocarboxylic acid or derivatives
  • Carboxylic acid
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organooxygen compound
  • Hydrocarbon derivative
  • Carbonyl group
  • Organic oxide
  • Alcohol
  • Aliphatic homomonocyclic compound
Molecular FrameworkAliphatic homomonocyclic compounds
External Descriptors
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP1.88ALOGPS
logP2.09ChemAxon
logS-3.2ALOGPS
pKa (Strongest Acidic)4.74ChemAxon
pKa (Strongest Basic)-3.5ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area74.6 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity74.98 m³·mol⁻¹ChemAxon
Polarizability27.77 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00000134
Chemspider IDNot Available
KEGG Compound IDC06082
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkAbscisic_acid
METLIN IDNot Available
PubChem Compound5280896
PDB IDNot Available
ChEBI ID2365
Good Scents IDNot Available
References
General References
  1. Xu ZJ, Nakajima M, Suzuki Y, Yamaguchi I: Cloning and characterization of the abscisic acid-specific glucosyltransferase gene from adzuki bean seedlings. Plant Physiol. 2002 Jul;129(3):1285-95. doi: 10.1104/pp.001784. [PubMed:12114582 ]
  2. Asami T, Min YK, Nakano T, Matsuyama T, Murofushi N, Yamaguchi I, Yoshida S: Synthesis and biological activity of 4'-methoxy derivatives of abscisic acid. Bioorg Med Chem Lett. 2000 Jul 17;10(14):1571-4. doi: 10.1016/s0960-894x(00)00302-4. [PubMed:10915053 ]
  3. Ueno K, Yoneyama H, Saito S, Mizutani M, Sakata K, Hirai N, Todoroki Y: A lead compound for the development of ABA 8'-hydroxylase inhibitors. Bioorg Med Chem Lett. 2005 Dec 1;15(23):5226-9. doi: 10.1016/j.bmcl.2005.08.042. Epub 2005 Sep 16. [PubMed:16169217 ]
  4. Ueno K, Yoneyama H, Mizutani M, Hirai N, Todoroki Y: Asymmetrical ligand binding by abscisic acid 8'-hydroxylase. Bioorg Med Chem. 2007 Sep 15;15(18):6311-22. doi: 10.1016/j.bmc.2007.06.010. Epub 2007 Jun 8. [PubMed:17582774 ]
  5. Ohkuma K, Lyon JL, Addicott FT, Smith OE: Abscisin II, an Abscission-Accelerating Substance from Young Cotton Fruit. Science. 1963 Dec 20;142(3599):1592-3. doi: 10.1126/science.142.3599.1592. [PubMed:17741533 ]
  6. LOTUS database [Link]