NP-MRD: Showing NP-Card for methyl (12s)-12-hydroxy-6-oxoindolo[2,1-b]quinazoline-12-carboxylate (NP0274631)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

2.0

Created at

2022-09-08 22:05:54 UTC

Updated at

2022-09-08 22:05:54 UTC

NP-MRD ID

NP0274631

Secondary Accession Numbers

None

Natural Product Identification

Common Name

methyl (12s)-12-hydroxy-6-oxoindolo[2,1-b]quinazoline-12-carboxylate

Description

Methyl (6S)-6-hydroxy-12-oxo-6H,12H-indolo[2,1-b]quinazoline-6-carboxylate belongs to the class of organic compounds known as indoloquinazolines. These are polycyclic aromatic compounds containing an indole fused to a quinazoline. Indole is a bicyclic compound consisting of a six-membered benzene ring fused to a five-membered nitrogen-containing pyrrole ring. Quinazoline is a heterocyclic compound consisting of two fused six-membered simple aromatic rings, a benzene ring and a pyrimidine ring. methyl (12s)-12-hydroxy-6-oxoindolo[2,1-b]quinazoline-12-carboxylate is found in Phaius mishmensis. Based on a literature review very few articles have been published on methyl (6S)-6-hydroxy-12-oxo-6H,12H-indolo[2,1-b]quinazoline-6-carboxylate.

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 35 38  0  0  0  0  0  0  0  0999 V2000
   -2.5059    3.0065    0.4045 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8368    1.8217    0.8371 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2463    0.9460   -0.0547 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3197    1.2323   -1.2746 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5601   -0.2781    0.4557 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.6818   -0.2598    1.8554 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3243   -1.4456   -0.0498 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6873   -1.5635    0.2478 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4053   -2.6409   -0.2125 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8243   -3.6401   -0.9772 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4848   -3.5027   -1.2566 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7170   -2.4147   -0.8034 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6597   -2.3520   -1.1412 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.3858   -1.3670   -0.7421 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8171   -1.0567   -0.9488 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6099   -1.7739   -1.6011 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0378    0.1981   -0.2505 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1938    0.9533   -0.1128 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1741    2.1254    0.6010 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0033    2.5596    1.1862 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8479    1.8050    1.0488 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8629    0.6232    0.3305 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8102   -0.3335    0.0419 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9420    3.8789    0.7711 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6258    2.9906   -0.7031 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5097    3.0366    0.8758 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8382    0.6755    2.1252 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1298   -0.7641    0.8536 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4663   -2.7203    0.0267 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4166   -4.4730   -1.3229 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9555   -4.2308   -1.8425 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1013    0.5893   -0.5831 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0702    2.7268    0.7174 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9679    3.4949    1.7613 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9358    2.1530    1.5097 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  1  1
  5 23  1  0
 23 22  1  0
 22 21  2  0
 21 20  1  0
 20 19  2  0
 19 18  1  0
 18 17  2  0
 17 15  1  0
 15 16  2  0
 15 14  1  0
 14 13  2  0
 13 12  1  0
 12 11  2  0
 11 10  1  0
 10  9  2  0
  9  8  1  0
  8  7  2  0
  7  5  1  0
 14 23  1  0
  7 12  1  0
 17 22  1  0
  1 24  1  0
  1 25  1  0
  1 26  1  0
  6 27  1  0
 21 35  1  0
 20 34  1  0
 19 33  1  0
 18 32  1  0
 11 31  1  0
 10 30  1  0
  9 29  1  0
  8 28  1  0
M  END


  Mrv1652309092200052D          

 23 26  0  0  1  0            999 V2000
    3.3357    3.0923    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9404    2.3682    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3698    1.6638    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1946    1.6835    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9745    0.9396    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.3300    1.4547    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7562    0.6761    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3754    1.2213    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1571    0.9577    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3198    0.1489    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7006   -0.3963    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9189   -0.1327    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2997   -0.6780    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.5180   -0.4144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7990   -0.8190    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7037   -1.6385    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1920   -0.2602    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3706   -0.3374    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1069    0.3353    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2369    1.0852    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0583    1.1624    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5359    0.4897    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3553    0.3944    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  5  3  1  1  0  0  0
  5  6  1  6  0  0  0
  5  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
  7 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 15 17  1  0  0  0  0
 17 18  2  0  0  0  0
 18 19  1  0  0  0  0
 19 20  2  0  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 17 22  1  0  0  0  0
 22 23  1  0  0  0  0
 14 23  1  0  0  0  0
  5 23  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0274631

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC(=O)[C@]1(O)N2C3=CC=CC=C3C(=O)C2=NC2=CC=CC=C12

> <INCHI_IDENTIFIER>
InChI=1S/C17H12N2O4/c1-23-16(21)17(22)11-7-3-4-8-12(11)18-15-14(20)10-6-2-5-9-13(10)19(15)17/h2-9,22H,1H3/t17-/m0/s1

> <INCHI_KEY>
KBIGHBLKYNEVDZ-KRWDZBQOSA-N

> <FORMULA>
C17H12N2O4

> <MOLECULAR_WEIGHT>
308.293

> <EXACT_MASS>
308.079706874

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
35

> <JCHEM_AVERAGE_POLARIZABILITY>
30.719797934943365

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
methyl (6S)-6-hydroxy-12-oxo-6H,12H-indolo[2,1-b]quinazoline-6-carboxylate

> <JCHEM_LOGP>
2.733800994

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
9.72444436219616

> <JCHEM_PKA_STRONGEST_BASIC>
2.6120692590772694

> <JCHEM_POLAR_SURFACE_AREA>
79.2

> <JCHEM_REFRACTIVITY>
84.15140000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
methyl (6S)-6-hydroxy-12-oxoindolo[2,1-b]quinazoline-6-carboxylate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 09-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   09-SEP-22         0                                  
HETATM    1  C   UNK     0       6.227   5.772   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       5.489   4.421   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       6.290   3.106   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0       7.830   3.142   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       5.552   1.754   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0       4.349   2.715   0.000  0.00  0.00           O+0
HETATM    7  C   UNK     0       7.012   1.262   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       8.167   2.280   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       9.627   1.788   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       9.930   0.278   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       8.774  -0.740   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       7.315  -0.248   0.000  0.00  0.00           C+0
HETATM   13  N   UNK     0       6.159  -1.266   0.000  0.00  0.00           N+0
HETATM   14  C   UNK     0       4.700  -0.774   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       3.358  -1.529   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0       3.180  -3.059   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0       2.225  -0.486   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       0.692  -0.630   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      -0.200   0.626   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       0.442   2.026   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       1.976   2.170   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       2.867   0.914   0.000  0.00  0.00           C+0
HETATM   23  N   UNK     0       4.397   0.736   0.000  0.00  0.00           N+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6    7   23                                             
CONECT    6    5                                                            
CONECT    7    5    8   12                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11    7   13                                                  
CONECT   13   12   14                                                       
CONECT   14   13   15   23                                                  
CONECT   15   14   16   17                                                  
CONECT   16   15                                                            
CONECT   17   15   18   22                                                  
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   17   23                                                  
CONECT   23   22   14    5                                                  
MASTER        0    0    0    0    0    0    0    0   23    0   52    0
END

View in JSmol

Synonyms

Value	Source
Methyl (6S)-6-hydroxy-12-oxo-6H,12H-indolo[2,1-b]quinazoline-6-carboxylic acid	Generator

Chemical Formula

C₁₇H₁₂N₂O₄

Average Mass

308.2930 Da

Monoisotopic Mass

308.07971 Da

IUPAC Name

methyl (6S)-6-hydroxy-12-oxo-6H,12H-indolo[2,1-b]quinazoline-6-carboxylate

Traditional Name

methyl (6S)-6-hydroxy-12-oxoindolo[2,1-b]quinazoline-6-carboxylate

CAS Registry Number

Not Available

SMILES

COC(=O)[C@]1(O)N2C3=CC=CC=C3C(=O)C2=NC2=CC=CC=C12

InChI Identifier

InChI=1S/C17H12N2O4/c1-23-16(21)17(22)11-7-3-4-8-12(11)18-15-14(20)10-6-2-5-9-13(10)19(15)17/h2-9,22H,1H3/t17-/m0/s1

InChI Key

KBIGHBLKYNEVDZ-KRWDZBQOSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Phaius mishmensis	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as indoloquinazolines. These are polycyclic aromatic compounds containing an indole fused to a quinazoline. Indole is a bicyclic compound consisting of a six-membered benzene ring fused to a five-membered nitrogen-containing pyrrole ring. Quinazoline is a heterocyclic compound consisting of two fused six-membered simple aromatic rings, a benzene ring and a pyrimidine ring.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Diazanaphthalenes

Sub Class

Benzodiazines

Direct Parent

Indoloquinazolines

Alternative Parents

Substituents

Indoloquinazoline
Alpha-amino acid or derivatives
Indole
Indole or derivatives
Aryl ketone
Benzenoid
Imidolactam
Methyl ester
Vinylogous amide
Carboxylic acid ester
Ketone
Azacycle
Organic 1,3-dipolar compound
Propargyl-type 1,3-dipolar organic compound
Amidine
Monocarboxylic acid or derivatives
Carboxylic acid amidine
Carboxylic acid derivative
Alkanolamine
Hydrocarbon derivative
Organic oxygen compound
Organopnictogen compound
Organic oxide
Organic nitrogen compound
Carbonyl group
Organonitrogen compound
Organooxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.73	ChemAxon
pKa (Strongest Acidic)	9.72	ChemAxon
pKa (Strongest Basic)	2.61	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	79.2 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	84.15 m³·mol⁻¹	ChemAxon
Polarizability	30.72 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

162851265

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for methyl (12s)-12-hydroxy-6-oxoindolo[2,1-b]quinazoline-12-carboxylate (NP0274631)

MOL for NP0274631 (methyl (12s)-12-hydroxy-6-oxoindolo[2,1-b]quinazoline-12-carboxylate)

3D MOL for NP0274631 (methyl (12s)-12-hydroxy-6-oxoindolo[2,1-b]quinazoline-12-carboxylate)

3D SDF for NP0274631 (methyl (12s)-12-hydroxy-6-oxoindolo[2,1-b]quinazoline-12-carboxylate)

3D-SDF for NP0274631 (methyl (12s)-12-hydroxy-6-oxoindolo[2,1-b]quinazoline-12-carboxylate)

PDB for NP0274631 (methyl (12s)-12-hydroxy-6-oxoindolo[2,1-b]quinazoline-12-carboxylate)

3D PDB for NP0274631 (methyl (12s)-12-hydroxy-6-oxoindolo[2,1-b]quinazoline-12-carboxylate)

SMILES for NP0274631 (methyl (12s)-12-hydroxy-6-oxoindolo[2,1-b]quinazoline-12-carboxylate)

INCHI for NP0274631 (methyl (12s)-12-hydroxy-6-oxoindolo[2,1-b]quinazoline-12-carboxylate)

Structure for NP0274631 (methyl (12s)-12-hydroxy-6-oxoindolo[2,1-b]quinazoline-12-carboxylate)

3D Structure for NP0274631 (methyl (12s)-12-hydroxy-6-oxoindolo[2,1-b]quinazoline-12-carboxylate)