NP-MRD: Showing NP-Card for (2r,3s,4ar,12bs)-2,3,4a,8,12b-pentahydroxy-3-methyl-2,4-dihydrotetraphene-1,7,12-trione (NP0272644)

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Record Information

Version

2.0

Created at

2022-09-08 19:20:26 UTC

Updated at

2022-09-08 19:20:26 UTC

NP-MRD ID

NP0272644

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(2r,3s,4ar,12bs)-2,3,4a,8,12b-pentahydroxy-3-methyl-2,4-dihydrotetraphene-1,7,12-trione

Description

Sakyomicin B belongs to the class of organic compounds known as angucyclines. These are polyketides with a structure based on then benz[a]anthracene skeleton, with the particularity that the central ring of the anthracene moiety is a para-quinone. Based on a literature review very few articles have been published on Sakyomicin B.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309082221202D          

 27 30  0  0  1  0            999 V2000
   -0.1020   -3.5454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6188   -3.1441    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0984   -2.5039    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8889   -3.9236    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6990   -4.0796    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.1589   -4.7032    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9690   -4.8591    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7792   -5.0150    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3193   -4.3914    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0492   -3.6118    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5893   -2.9882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3193   -2.2086    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.3994   -3.1441    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9395   -2.5204    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7497   -2.6764    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0197   -3.4559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4796   -4.0796    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7497   -4.8591    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6695   -3.9236    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1294   -4.5473    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3994   -5.3268    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2391   -3.4559    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.7792   -2.8323    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9690   -2.6764    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5091   -2.0527    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1589   -2.5204    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.8889   -1.7409    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  1  0  0  0
  2  3  1  6  0  0  0
  2  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  1  0  0  0
  5  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 11 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 17 19  2  0  0  0  0
 13 19  1  0  0  0  0
 19 20  1  0  0  0  0
  9 20  1  0  0  0  0
 20 21  2  0  0  0  0
 10 22  1  0  0  0  0
  5 22  1  0  0  0  0
 22 23  1  1  0  0  0
 22 24  1  0  0  0  0
 24 25  2  0  0  0  0
 24 26  1  0  0  0  0
  2 26  1  0  0  0  0
 26 27  1  1  0  0  0
M  END

     RDKit          3D

 43 46  0  0  0  0  0  0  0  0999 V2000
   -4.2919   -0.1459   -0.9230 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5735   -0.6466    0.2847 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.5240   -1.0253    1.2243 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7656    0.4715    0.9069 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7243    1.0362   -0.0399 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.3733    1.6131   -1.1685 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0788    2.1849    0.6283 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1841    2.3481    0.8741 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0921    1.2736    0.4444 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6215    0.2037   -0.1597 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5964   -0.8229   -0.5690 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2492   -1.8816   -1.1537 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0224   -0.6491   -0.3089 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9415   -1.6038   -0.6879 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2767   -1.4163   -0.4315 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7606   -0.3045    0.1965 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8461    0.6881    0.5954 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3748    1.7783    1.2176 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.4971    0.4878    0.3308 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5265    1.4896    0.7274 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8950    2.5294    1.3045 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8040   -0.0594   -0.4577 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.9569   -0.2048   -1.8650 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2604   -1.3377    0.1828 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4558   -1.9564    0.8417 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6565   -1.8165    0.0062 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.8714   -2.3695   -1.2438 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5616    0.9225   -0.7450 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2642   -0.6826   -1.0666 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7059   -0.1745   -1.8565 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2592   -0.7998    2.1533 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2055    0.0223    1.7526 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4091    1.2576    1.3411 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6781    1.6083   -1.8781 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7795    2.9762    0.9410 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5533    3.2159    1.3632 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5528   -2.4876   -1.1875 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9880   -2.1727   -0.7337 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8193   -0.1471    0.4043 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9975    2.5729    1.5796 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9429   -1.1598   -2.0591 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8588   -2.6046    0.7560 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7937   -2.2112   -1.5218 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  1
  2  4  1  0
  4  5  1  0
  5  6  1  6
  5  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  2  0
 11 13  1  0
 13 14  2  0
 14 15  1  0
 15 16  2  0
 16 17  1  0
 17 18  1  0
 17 19  2  0
 19 20  1  0
 20 21  2  0
 10 22  1  0
 22 23  1  6
 22 24  1  0
 24 25  2  0
 24 26  1  0
 26 27  1  0
 26  2  1  0
 22  5  1  0
 20  9  1  0
 19 13  1  0
  1 28  1  0
  1 29  1  0
  1 30  1  0
  3 31  1  0
  4 32  1  0
  4 33  1  0
  6 34  1  0
  7 35  1  0
  8 36  1  0
 14 37  1  0
 15 38  1  0
 16 39  1  0
 18 40  1  0
 23 41  1  0
 26 42  1  1
 27 43  1  0
M  END


  Mrv1652309082221202D          

 27 30  0  0  1  0            999 V2000
   -0.1020   -3.5454    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6188   -3.1441    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0984   -2.5039    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8889   -3.9236    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6990   -4.0796    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.1589   -4.7032    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9690   -4.8591    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7792   -5.0150    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3193   -4.3914    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0492   -3.6118    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5893   -2.9882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3193   -2.2086    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.3994   -3.1441    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9395   -2.5204    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7497   -2.6764    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0197   -3.4559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4796   -4.0796    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7497   -4.8591    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6695   -3.9236    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1294   -4.5473    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3994   -5.3268    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2391   -3.4559    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.7792   -2.8323    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9690   -2.6764    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5091   -2.0527    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1589   -2.5204    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.8889   -1.7409    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  1  0  0  0
  2  3  1  6  0  0  0
  2  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  1  0  0  0
  5  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 11 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 17 19  2  0  0  0  0
 13 19  1  0  0  0  0
 19 20  1  0  0  0  0
  9 20  1  0  0  0  0
 20 21  2  0  0  0  0
 10 22  1  0  0  0  0
  5 22  1  0  0  0  0
 22 23  1  1  0  0  0
 22 24  1  0  0  0  0
 24 25  2  0  0  0  0
 24 26  1  0  0  0  0
  2 26  1  0  0  0  0
 26 27  1  1  0  0  0
M  END
> <DATABASE_ID>
NP0272644

> <DATABASE_NAME>
NP-MRD

> <SMILES>
C[C@]1(O)C[C@@]2(O)C=CC3=C(C(=O)C4=CC=CC(O)=C4C3=O)[C@@]2(O)C(=O)[C@@H]1O

> <INCHI_IDENTIFIER>
InChI=1S/C19H16O8/c1-17(25)7-18(26)6-5-9-12(19(18,27)16(24)15(17)23)14(22)8-3-2-4-10(20)11(8)13(9)21/h2-6,15,20,23,25-27H,7H2,1H3/t15-,17-,18-,19+/m0/s1

> <INCHI_KEY>
TVRZORMBTKRMAO-DSLXNQLJSA-N

> <FORMULA>
C19H16O8

> <MOLECULAR_WEIGHT>
372.329

> <EXACT_MASS>
372.084517475

> <JCHEM_ACCEPTOR_COUNT>
8

> <JCHEM_ATOM_COUNT>
43

> <JCHEM_AVERAGE_POLARIZABILITY>
35.18519982052573

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
5

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2R,3S,4aR,12bS)-2,3,4a,8,12b-pentahydroxy-3-methyl-1,2,3,4,4a,7,12,12b-octahydrotetraphene-1,7,12-trione

> <JCHEM_LOGP>
-0.5615543783333335

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
10.859260631849608

> <JCHEM_PKA_STRONGEST_ACIDIC>
8.214053140513684

> <JCHEM_PKA_STRONGEST_BASIC>
-3.339073168881842

> <JCHEM_POLAR_SURFACE_AREA>
152.35999999999999

> <JCHEM_REFRACTIVITY>
92.62739999999997

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(2R,3S,4aR,12bS)-2,3,4a,8,12b-pentahydroxy-3-methyl-2,4-dihydrotetraphene-1,7,12-trione

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 08-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   08-SEP-22         0                                  
HETATM    1  C   UNK     0      -0.190  -6.618   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       1.155  -5.869   0.000  0.00  0.00           C+0
HETATM    3  O   UNK     0       0.184  -4.674   0.000  0.00  0.00           O+0
HETATM    4  C   UNK     0       1.659  -7.324   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       3.171  -7.615   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0       2.163  -8.779   0.000  0.00  0.00           O+0
HETATM    7  C   UNK     0       3.676  -9.070   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       5.188  -9.361   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       6.196  -8.197   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       5.692  -6.742   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       6.700  -5.578   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0       6.196  -4.123   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0       8.212  -5.869   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       9.220  -4.705   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      10.733  -4.996   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      11.237  -6.451   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      10.229  -7.615   0.000  0.00  0.00           C+0
HETATM   18  O   UNK     0      10.733  -9.070   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0       8.716  -7.324   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       7.708  -8.488   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0       8.212  -9.943   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       4.180  -6.451   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0       5.188  -5.287   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0       3.676  -4.996   0.000  0.00  0.00           C+0
HETATM   25  O   UNK     0       4.684  -3.832   0.000  0.00  0.00           O+0
HETATM   26  C   UNK     0       2.163  -4.705   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0       1.659  -3.250   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3    4   26                                             
CONECT    3    2                                                            
CONECT    4    2    5                                                       
CONECT    5    4    6    7   22                                             
CONECT    6    5                                                            
CONECT    7    5    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10   20                                                  
CONECT   10    9   11   22                                                  
CONECT   11   10   12   13                                                  
CONECT   12   11                                                            
CONECT   13   11   14   19                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18   19                                                  
CONECT   18   17                                                            
CONECT   19   17   13   20                                                  
CONECT   20   19    9   21                                                  
CONECT   21   20                                                            
CONECT   22   10    5   23   24                                             
CONECT   23   22                                                            
CONECT   24   22   25   26                                                  
CONECT   25   24                                                            
CONECT   26   24    2   27                                                  
CONECT   27   26                                                            
MASTER        0    0    0    0    0    0    0    0   27    0   60    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₉H₁₆O₈

Average Mass

372.3290 Da

Monoisotopic Mass

372.08452 Da

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

C[C@]1(O)C[C@@]2(O)C=CC3=C(C(=O)C4=CC=CC(O)=C4C3=O)[C@@]2(O)C(=O)[C@@H]1O

InChI Identifier

InChI=1S/C19H16O8/c1-17(25)7-18(26)6-5-9-12(19(18,27)16(24)15(17)23)14(22)8-3-2-4-10(20)11(8)13(9)21/h2-6,15,20,23,25-27H,7H2,1H3/t15-,17-,18-,19+/m0/s1

InChI Key

TVRZORMBTKRMAO-DSLXNQLJSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as angucyclines. These are polyketides with a structure based on then benz[a]anthracene skeleton, with the particularity that the central ring of the anthracene moiety is a para-quinone.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Angucyclines

Sub Class

Not Available

Direct Parent

Angucyclines

Alternative Parents

Substituents

Angucycline core
9,10-anthraquinone
Anthraquinone
Hydroxyanthraquinone
Naphthalene
Quinone
Aryl ketone
1-hydroxy-2-unsubstituted benzenoid
1-hydroxy-4-unsubstituted benzenoid
Benzenoid
Tertiary alcohol
Cyclic alcohol
Vinylogous acid
Secondary alcohol
Ketone
Polyol
Hydrocarbon derivative
Alcohol
Organooxygen compound
Organic oxide
Organic oxygen compound
Carbonyl group
Aromatic homopolycyclic compound

Molecular Framework

Aromatic homopolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

2342900

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

3086225

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (2r,3s,4ar,12bs)-2,3,4a,8,12b-pentahydroxy-3-methyl-2,4-dihydrotetraphene-1,7,12-trione (NP0272644)

MOL for NP0272644 ((2r,3s,4ar,12bs)-2,3,4a,8,12b-pentahydroxy-3-methyl-2,4-dihydrotetraphene-1,7,12-trione)

3D MOL for NP0272644 ((2r,3s,4ar,12bs)-2,3,4a,8,12b-pentahydroxy-3-methyl-2,4-dihydrotetraphene-1,7,12-trione)

3D SDF for NP0272644 ((2r,3s,4ar,12bs)-2,3,4a,8,12b-pentahydroxy-3-methyl-2,4-dihydrotetraphene-1,7,12-trione)

3D-SDF for NP0272644 ((2r,3s,4ar,12bs)-2,3,4a,8,12b-pentahydroxy-3-methyl-2,4-dihydrotetraphene-1,7,12-trione)

PDB for NP0272644 ((2r,3s,4ar,12bs)-2,3,4a,8,12b-pentahydroxy-3-methyl-2,4-dihydrotetraphene-1,7,12-trione)

3D PDB for NP0272644 ((2r,3s,4ar,12bs)-2,3,4a,8,12b-pentahydroxy-3-methyl-2,4-dihydrotetraphene-1,7,12-trione)

SMILES for NP0272644 ((2r,3s,4ar,12bs)-2,3,4a,8,12b-pentahydroxy-3-methyl-2,4-dihydrotetraphene-1,7,12-trione)

INCHI for NP0272644 ((2r,3s,4ar,12bs)-2,3,4a,8,12b-pentahydroxy-3-methyl-2,4-dihydrotetraphene-1,7,12-trione)

Structure for NP0272644 ((2r,3s,4ar,12bs)-2,3,4a,8,12b-pentahydroxy-3-methyl-2,4-dihydrotetraphene-1,7,12-trione)

3D Structure for NP0272644 ((2r,3s,4ar,12bs)-2,3,4a,8,12b-pentahydroxy-3-methyl-2,4-dihydrotetraphene-1,7,12-trione)