NP-MRD: Showing NP-Card for (1s,2s,4r,5r,6r,9s,10r,17r)-5,10-dihydroxy-12-isopropyl-1,6-dimethyl-3,8,13-trioxapentacyclo[7.7.1.0²,⁴.0⁶,¹⁷.0¹¹,¹⁶]heptadeca-11,15-diene-7,14-dione (NP0271995)

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Record Information

Version

2.0

Created at

2022-09-08 18:28:01 UTC

Updated at

2022-09-08 18:28:01 UTC

NP-MRD ID

NP0271995

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1s,2s,4r,5r,6r,9s,10r,17r)-5,10-dihydroxy-12-isopropyl-1,6-dimethyl-3,8,13-trioxapentacyclo[7.7.1.0²,⁴.0⁶,¹⁷.0¹¹,¹⁶]heptadeca-11,15-diene-7,14-dione

Description

Nagilactone C belongs to the class of organic compounds known as naphthopyrans. Naphthopyrans are compounds containing a pyran ring fused to a naphthalene moiety. Furan is a 6 membered-ring non-aromatic ring with five carbon and one oxygen atoms. Naphthalene is a polycyclic aromatic hydrocarbon made up of two fused benzene rings. (1s,2s,4r,5r,6r,9s,10r,17r)-5,10-dihydroxy-12-isopropyl-1,6-dimethyl-3,8,13-trioxapentacyclo[7.7.1.0²,⁴.0⁶,¹⁷.0¹¹,¹⁶]heptadeca-11,15-diene-7,14-dione is found in Ileostylus micranthus, Nageia nagi, Podocarpus fasciculus and Podocarpus purdieanus. (1s,2s,4r,5r,6r,9s,10r,17r)-5,10-dihydroxy-12-isopropyl-1,6-dimethyl-3,8,13-trioxapentacyclo[7.7.1.0²,⁴.0⁶,¹⁷.0¹¹,¹⁶]heptadeca-11,15-diene-7,14-dione was first documented in 2004 (PMID: 14970397). Based on a literature review a small amount of articles have been published on Nagilactone C (PMID: 22189050) (PMID: 18379113).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309082220282D          

 26 30  0  0  1  0            999 V2000
    0.7740   -0.2779    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5653   -0.0442    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7586    0.7578    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1632   -0.6127    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9699   -1.4147    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5678   -1.9831    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3745   -2.7852    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3591   -1.7495    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5524   -0.9475    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9544   -0.3791    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1477    0.4230    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.5498    0.9914    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9390    0.6566    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.2948    1.4009    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.1126    1.2925    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6811    1.8904    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2623    0.4812    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.9426    0.9479    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9653    0.0495    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.6907    0.4425    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9430   -0.7752    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.9207   -1.5999    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2176   -1.1682    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.3436   -0.7139    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.2644   -1.5350    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5369    0.0882    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  2  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  6  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
  4 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  1  0  0  0
 11 13  1  0  0  0  0
 13 14  1  1  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 15 17  1  0  0  0  0
 17 18  1  6  0  0  0
 17 19  1  0  0  0  0
 19 20  1  1  0  0  0
 19 21  1  0  0  0  0
 21 22  1  1  0  0  0
 23 22  1  1  0  0  0
 21 23  1  0  0  0  0
 23 24  1  0  0  0  0
  9 24  1  0  0  0  0
 24 25  1  1  0  0  0
 24 26  1  0  0  0  0
 26 13  1  1  0  0  0
 17 26  1  0  0  0  0
M  END

     RDKit          3D

 48 52  0  0  0  0  0  0  0  0999 V2000
    5.0412    0.1107   -0.5777 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6786    0.7456   -0.1859 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9277    1.1956    1.2453 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6771   -0.3075   -0.1687 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0869   -1.5769   -0.1005 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2914   -2.5923   -0.0724 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7561   -3.7540   -0.0076 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.9328   -2.4068   -0.1132 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4782   -1.0942   -0.1861 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3184   -0.0246   -0.2159 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8651    1.3420   -0.3238 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.1881    1.9851   -1.5130 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5908    1.5677   -0.0919 C   0  0  1  0  0  0  0  0  0  0  0  0
   -1.3578    1.8666   -1.2377 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7022    1.6641   -0.8493 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6689    2.1706   -1.4425 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7532    0.7835    0.3308 C   0  0  1  0  0  0  0  0  0  0  0  0
   -3.1067    1.6676    1.5288 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6748   -0.3830    0.2380 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.2862   -0.5274   -1.0212 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1252   -1.6632    0.7768 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.7137   -2.6829   -0.0889 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7258   -1.9727    0.5485 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.9820   -0.9041   -0.2381 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.3851   -1.0599   -1.6704 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3077    0.3650    0.4375 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.4597   -0.4763    0.2473 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6914    0.8945   -0.9814 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7744   -0.5660   -1.4282 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5475    1.5464   -0.9018 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5742    2.0892    1.2388 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5687    0.3818    1.7057 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0527    1.2386    1.8822 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2252   -3.2251   -0.0918 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3869    1.9470    0.4766 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5016    2.9189   -1.3515 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7677    2.4109    0.6066 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1999    1.8884    1.3839 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9077    1.1269    2.4533 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5897    2.6290    1.4235 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5584   -0.1330    0.9022 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4533   -1.4879   -1.1423 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5617   -2.1005    1.7248 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1176   -2.4038    1.3567 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0742   -1.9266   -1.8126 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8259   -0.2041   -2.1600 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5114   -1.3415   -2.3373 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0764    0.2786    1.5116 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  2  4  1  0
  4 10  2  0
 10 11  1  0
 11 12  1  0
 11 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  2  0
 15 17  1  0
 17 18  1  1
 17 26  1  0
 26 24  1  0
 24 25  1  6
 24 23  1  0
 23 22  1  0
 22 21  1  0
 21 19  1  0
 19 20  1  0
 24  9  1  0
  9  8  2  0
  8  6  1  0
  6  7  2  0
  6  5  1  0
  5  4  1  0
  9 10  1  0
 26 13  1  0
 21 23  1  0
 19 17  1  0
  1 27  1  0
  1 28  1  0
  1 29  1  0
  2 30  1  0
  3 31  1  0
  3 32  1  0
  3 33  1  0
 11 35  1  1
 12 36  1  0
 13 37  1  1
 18 38  1  0
 18 39  1  0
 18 40  1  0
 26 48  1  1
 25 45  1  0
 25 46  1  0
 25 47  1  0
 23 44  1  1
 21 43  1  1
 19 41  1  1
 20 42  1  0
  8 34  1  0
M  END


  Mrv1652309082220282D          

 26 30  0  0  1  0            999 V2000
    0.7740   -0.2779    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5653   -0.0442    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7586    0.7578    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1632   -0.6127    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9699   -1.4147    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.5678   -1.9831    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3745   -2.7852    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3591   -1.7495    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5524   -0.9475    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9544   -0.3791    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1477    0.4230    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.5498    0.9914    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9390    0.6566    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.2948    1.4009    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.1126    1.2925    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6811    1.8904    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2623    0.4812    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.9426    0.9479    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9653    0.0495    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    6.6907    0.4425    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9430   -0.7752    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    5.9207   -1.5999    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2176   -1.1682    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    4.3436   -0.7139    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.2644   -1.5350    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5369    0.0882    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  2  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  2  0  0  0  0
  6  8  1  0  0  0  0
  8  9  2  0  0  0  0
  9 10  1  0  0  0  0
  4 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  1  0  0  0
 11 13  1  0  0  0  0
 13 14  1  1  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 15 17  1  0  0  0  0
 17 18  1  6  0  0  0
 17 19  1  0  0  0  0
 19 20  1  1  0  0  0
 19 21  1  0  0  0  0
 21 22  1  1  0  0  0
 23 22  1  1  0  0  0
 21 23  1  0  0  0  0
 23 24  1  0  0  0  0
  9 24  1  0  0  0  0
 24 25  1  1  0  0  0
 24 26  1  0  0  0  0
 26 13  1  1  0  0  0
 17 26  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0271995

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(C)C1=C2[C@@H](O)[C@H]3OC(=O)[C@]4(C)[C@H]3[C@](C)([C@@H]3O[C@@H]3[C@@H]4O)C2=CC(=O)O1

> <INCHI_IDENTIFIER>
InChI=1S/C19H22O7/c1-6(2)11-9-7(5-8(20)24-11)18(3)14-12(10(9)21)26-17(23)19(14,4)15(22)13-16(18)25-13/h5-6,10,12-16,21-22H,1-4H3/t10-,12-,13-,14-,15+,16-,18-,19-/m1/s1

> <INCHI_KEY>
DGNOPGIIPQKNHD-RSKPZANQSA-N

> <FORMULA>
C19H22O7

> <MOLECULAR_WEIGHT>
362.378

> <EXACT_MASS>
362.136553048

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
48

> <JCHEM_AVERAGE_POLARIZABILITY>
36.172646634976886

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1S,2S,4R,5R,6R,9S,10R,17R)-5,10-dihydroxy-1,6-dimethyl-12-(propan-2-yl)-3,8,13-trioxapentacyclo[7.7.1.0^{2,4}.0^{6,17}.0^{11,16}]heptadeca-11,15-diene-7,14-dione

> <JCHEM_LOGP>
0.19968289466666705

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.711361913411455

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.10908765168909

> <JCHEM_PKA_STRONGEST_BASIC>
-3.493023623503463

> <JCHEM_POLAR_SURFACE_AREA>
105.59000000000002

> <JCHEM_REFRACTIVITY>
88.46920000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(1S,2S,4R,5R,6R,9S,10R,17R)-5,10-dihydroxy-12-isopropyl-1,6-dimethyl-3,8,13-trioxapentacyclo[7.7.1.0^{2,4}.0^{6,17}.0^{11,16}]heptadeca-11,15-diene-7,14-dione

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 08-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   08-SEP-22         0                                  
HETATM    1  C   UNK     0       1.445  -0.519   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       2.922  -0.083   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       3.283   1.415   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       4.038  -1.144   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0       3.677  -2.641   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0       4.793  -3.702   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0       4.432  -5.199   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0       6.270  -3.266   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       6.631  -1.769   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       5.515  -0.708   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       5.876   0.790   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0       4.760   1.851   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0       7.353   1.226   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0       8.017   2.615   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0       9.544   2.413   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0      10.605   3.529   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0       9.823   0.898   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      11.093   1.769   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      11.135   0.092   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0      12.489   0.826   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0      11.094  -1.447   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0      11.052  -2.986   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0       9.740  -2.181   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       8.108  -1.333   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       7.960  -2.865   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       8.469   0.165   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3    4                                                  
CONECT    3    2                                                            
CONECT    4    2    5   10                                                  
CONECT    5    4    6                                                       
CONECT    6    5    7    8                                                  
CONECT    7    6                                                            
CONECT    8    6    9                                                       
CONECT    9    8   10   24                                                  
CONECT   10    9    4   11                                                  
CONECT   11   10   12   13                                                  
CONECT   12   11                                                            
CONECT   13   11   14   26                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16   17                                                  
CONECT   16   15                                                            
CONECT   17   15   18   19   26                                             
CONECT   18   17                                                            
CONECT   19   17   20   21                                                  
CONECT   20   19                                                            
CONECT   21   19   22   23                                                  
CONECT   22   21   23                                                       
CONECT   23   22   21   24                                                  
CONECT   24   23    9   25   26                                             
CONECT   25   24                                                            
CONECT   26   24   13   17                                                  
MASTER        0    0    0    0    0    0    0    0   26    0   60    0
END

View in JSmol

Synonyms

Value	Source
Nagilactone a OF nagilactone C	MeSH
Nagilactone b OF nagilactone C	MeSH
Nagilactone e OF nagilactone C	MeSH
Nagilactone F OF nagilactone C	MeSH
Nagilactone D OF nagilactone C	MeSH

Chemical Formula

C₁₉H₂₂O₇

Average Mass

362.3780 Da

Monoisotopic Mass

362.13655 Da

IUPAC Name

(1S,2S,4R,5R,6R,9S,10R,17R)-5,10-dihydroxy-1,6-dimethyl-12-(propan-2-yl)-3,8,13-trioxapentacyclo[7.7.1.0^{2,4}.0^{6,17}.0^{11,16}]heptadeca-11,15-diene-7,14-dione

Traditional Name

(1S,2S,4R,5R,6R,9S,10R,17R)-5,10-dihydroxy-12-isopropyl-1,6-dimethyl-3,8,13-trioxapentacyclo[7.7.1.0^{2,4}.0^{6,17}.0^{11,16}]heptadeca-11,15-diene-7,14-dione

CAS Registry Number

Not Available

SMILES

CC(C)C1=C2[C@@H](O)[C@H]3OC(=O)[C@]4(C)[C@H]3[C@](C)([C@@H]3O[C@@H]3[C@@H]4O)C2=CC(=O)O1

InChI Identifier

InChI=1S/C19H22O7/c1-6(2)11-9-7(5-8(20)24-11)18(3)14-12(10(9)21)26-17(23)19(14,4)15(22)13-16(18)25-13/h5-6,10,12-16,21-22H,1-4H3/t10-,12-,13-,14-,15+,16-,18-,19-/m1/s1

InChI Key

DGNOPGIIPQKNHD-RSKPZANQSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Ileostylus micranthus	LOTUS Database	35616633
Nageia nagi	LOTUS Database	35616633
Podocarpus fasciculus	LOTUS Database	35616633
Podocarpus purdieanus	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as naphthopyrans. Naphthopyrans are compounds containing a pyran ring fused to a naphthalene moiety. Furan is a 6 membered-ring non-aromatic ring with five carbon and one oxygen atoms. Naphthalene is a polycyclic aromatic hydrocarbon made up of two fused benzene rings.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Naphthopyrans

Sub Class

Not Available

Direct Parent

Naphthopyrans

Alternative Parents

Substituents

Naphthopyran
Naphthalene
Oxepane
Pyranone
Gamma butyrolactone
Pyran
Cyclic alcohol
Heteroaromatic compound
Tetrahydrofuran
Carboxylic acid ester
Lactone
Secondary alcohol
Monocarboxylic acid or derivatives
Ether
Oxirane
Dialkyl ether
Carboxylic acid derivative
Oxacycle
Hydrocarbon derivative
Organic oxide
Organic oxygen compound
Alcohol
Organooxygen compound
Carbonyl group
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	0.2	ChemAxon
pKa (Strongest Acidic)	13.11	ChemAxon
pKa (Strongest Basic)	-3.5	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	105.59 Å²	ChemAxon
Rotatable Bond Count	1	ChemAxon
Refractivity	88.47 m³·mol⁻¹	ChemAxon
Polarizability	36.17 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00000270

Chemspider ID

65416

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

72505

PDB ID

3J2

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Faiella L, Temraz A, De Tommasi N, Braca A: Diterpenes, ionol-derived, and flavone glycosides from Podocarpus elongatus. Phytochemistry. 2012 Apr;76:172-7. doi: 10.1016/j.phytochem.2011.11.007. Epub 2011 Dec 19. [PubMed:22189050 ]
Kuo YJ, Hwang SY, Wu MD, Liao CC, Liang YH, Kuo YH, Ho HO: Cytotoxic constituents from Podocarpus fasciculus. Chem Pharm Bull (Tokyo). 2008 Apr;56(4):585-8. doi: 10.1248/cpb.56.585. [PubMed:18379113 ]
Chan J, Khan SN, Harvey I, Merrick W, Pelletier J: Eukaryotic protein synthesis inhibitors identified by comparison of cytotoxicity profiles. RNA. 2004 Mar;10(3):528-43. doi: 10.1261/rna.5200204. [PubMed:14970397 ]
LOTUS database [Link]

Showing NP-Card for (1s,2s,4r,5r,6r,9s,10r,17r)-5,10-dihydroxy-12-isopropyl-1,6-dimethyl-3,8,13-trioxapentacyclo[7.7.1.0²,⁴.0⁶,¹⁷.0¹¹,¹⁶]heptadeca-11,15-diene-7,14-dione (NP0271995)

MOL for NP0271995 ((1s,2s,4r,5r,6r,9s,10r,17r)-5,10-dihydroxy-12-isopropyl-1,6-dimethyl-3,8,13-trioxapentacyclo[7.7.1.0²,⁴.0⁶,¹⁷.0¹¹,¹⁶]heptadeca-11,15-diene-7,14-dione)

3D MOL for NP0271995 ((1s,2s,4r,5r,6r,9s,10r,17r)-5,10-dihydroxy-12-isopropyl-1,6-dimethyl-3,8,13-trioxapentacyclo[7.7.1.0²,⁴.0⁶,¹⁷.0¹¹,¹⁶]heptadeca-11,15-diene-7,14-dione)

3D SDF for NP0271995 ((1s,2s,4r,5r,6r,9s,10r,17r)-5,10-dihydroxy-12-isopropyl-1,6-dimethyl-3,8,13-trioxapentacyclo[7.7.1.0²,⁴.0⁶,¹⁷.0¹¹,¹⁶]heptadeca-11,15-diene-7,14-dione)

3D-SDF for NP0271995 ((1s,2s,4r,5r,6r,9s,10r,17r)-5,10-dihydroxy-12-isopropyl-1,6-dimethyl-3,8,13-trioxapentacyclo[7.7.1.0²,⁴.0⁶,¹⁷.0¹¹,¹⁶]heptadeca-11,15-diene-7,14-dione)

PDB for NP0271995 ((1s,2s,4r,5r,6r,9s,10r,17r)-5,10-dihydroxy-12-isopropyl-1,6-dimethyl-3,8,13-trioxapentacyclo[7.7.1.0²,⁴.0⁶,¹⁷.0¹¹,¹⁶]heptadeca-11,15-diene-7,14-dione)

3D PDB for NP0271995 ((1s,2s,4r,5r,6r,9s,10r,17r)-5,10-dihydroxy-12-isopropyl-1,6-dimethyl-3,8,13-trioxapentacyclo[7.7.1.0²,⁴.0⁶,¹⁷.0¹¹,¹⁶]heptadeca-11,15-diene-7,14-dione)

SMILES for NP0271995 ((1s,2s,4r,5r,6r,9s,10r,17r)-5,10-dihydroxy-12-isopropyl-1,6-dimethyl-3,8,13-trioxapentacyclo[7.7.1.0²,⁴.0⁶,¹⁷.0¹¹,¹⁶]heptadeca-11,15-diene-7,14-dione)

INCHI for NP0271995 ((1s,2s,4r,5r,6r,9s,10r,17r)-5,10-dihydroxy-12-isopropyl-1,6-dimethyl-3,8,13-trioxapentacyclo[7.7.1.0²,⁴.0⁶,¹⁷.0¹¹,¹⁶]heptadeca-11,15-diene-7,14-dione)

Structure for NP0271995 ((1s,2s,4r,5r,6r,9s,10r,17r)-5,10-dihydroxy-12-isopropyl-1,6-dimethyl-3,8,13-trioxapentacyclo[7.7.1.0²,⁴.0⁶,¹⁷.0¹¹,¹⁶]heptadeca-11,15-diene-7,14-dione)

3D Structure for NP0271995 ((1s,2s,4r,5r,6r,9s,10r,17r)-5,10-dihydroxy-12-isopropyl-1,6-dimethyl-3,8,13-trioxapentacyclo[7.7.1.0²,⁴.0⁶,¹⁷.0¹¹,¹⁶]heptadeca-11,15-diene-7,14-dione)