NP-MRD: Showing NP-Card for methyl (2r)-2-methyl-4-{4-[(1e)-3-oxoprop-1-en-1-yl]phenoxy}butanoate (NP0271868)

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Record Information

Version

2.0

Created at

2022-09-08 18:17:41 UTC

Updated at

2022-09-08 18:17:41 UTC

NP-MRD ID

NP0271868

Secondary Accession Numbers

None

Natural Product Identification

Common Name

methyl (2r)-2-methyl-4-{4-[(1e)-3-oxoprop-1-en-1-yl]phenoxy}butanoate

Description

(R)-2-Methyl-4-[4-(3-oxo-1-propenyl)phenoxy]butanoic acid methyl ester belongs to the class of organic compounds known as cinnamaldehydes. These are organic aromatic compounds containing a cinnamlaldehyde moiety, consisting of a benzene and an aldehyde group to form 3-phenylprop-2-enal. methyl (2r)-2-methyl-4-{4-[(1e)-3-oxoprop-1-en-1-yl]phenoxy}butanoate is found in Aralia bipinnata. Based on a literature review very few articles have been published on (R)-2-Methyl-4-[4-(3-oxo-1-propenyl)phenoxy]butanoic acid methyl ester.

Structure

MOL 3D MOL SDF PDB SMILES InChI

     RDKit          3D

 37 37  0  0  0  0  0  0  0  0999 V2000
    3.0816   -2.3095   -0.7174 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3565   -1.0605   -0.0818 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.1674    0.1193   -0.7751 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7541    0.0486   -1.9572 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.4436    1.4359   -0.1443 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.9297    1.4180    0.2396 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6761    1.6250    1.1307 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1937    1.5610    0.9525 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7772    0.3119    0.4279 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5852    0.1176    0.2119 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5186    1.0970    0.4928 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8608    0.9334    0.2907 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3193   -0.2827   -0.2256 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7449   -0.3972   -0.4173 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2811   -1.4958   -0.8964 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7347   -1.6037   -1.0885 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4825   -0.6508   -0.7986 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4133   -1.2638   -0.5099 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0545   -1.0705   -0.2947 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1560   -3.1326    0.0169 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9122   -2.4702   -1.4507 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1133   -2.2876   -1.2467 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3129    2.2446   -0.8659 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5405    0.9520   -0.5399 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9810    0.8856    1.2151 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2235    2.4800    0.4000 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9268    2.6312    1.5225 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9773    0.8694    1.8646 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7294    1.6480    1.9571 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7896    2.4097    0.3576 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1436    2.0434    0.8964 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5422    1.7325    0.5281 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3977    0.4193   -0.1702 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7021   -2.3539   -1.1672 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1630   -2.5069   -1.4810 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7505   -2.2277   -0.9164 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3482   -1.8703   -0.5298 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  1  0
  5  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  2  0
 11 12  1  0
 12 13  2  0
 13 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  2  0
 13 18  1  0
 18 19  2  0
 19 10  1  0
  1 20  1  0
  1 21  1  0
  1 22  1  0
  5 23  1  6
  6 24  1  0
  6 25  1  0
  6 26  1  0
  7 27  1  0
  7 28  1  0
  8 29  1  0
  8 30  1  0
 11 31  1  0
 12 32  1  0
 14 33  1  0
 15 34  1  0
 16 35  1  0
 18 36  1  0
 19 37  1  0
M  END


  Mrv1652309082220172D          

 19 19  0  0  1  0            999 V2000
    0.7145   -3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -4.1250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -4.1250    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.8579   -4.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -4.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592   -5.3625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592   -6.1875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737   -6.6000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2881   -6.1875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -5.3625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -4.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  1  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  1  0  0  0  0
 10 11  2  0  0  0  0
 11 12  1  0  0  0  0
 12 13  2  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 13 18  1  0  0  0  0
 18 19  2  0  0  0  0
 10 19  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0271868

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC(=O)[C@H](C)CCOC1=CC=C(\C=C\C=O)C=C1

> <INCHI_IDENTIFIER>
InChI=1S/C15H18O4/c1-12(15(17)18-2)9-11-19-14-7-5-13(6-8-14)4-3-10-16/h3-8,10,12H,9,11H2,1-2H3/b4-3+/t12-/m1/s1

> <INCHI_KEY>
HTNLOKKMGKFIFP-AAOUONPWSA-N

> <FORMULA>
C15H18O4

> <MOLECULAR_WEIGHT>
262.305

> <EXACT_MASS>
262.12050906

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
37

> <JCHEM_AVERAGE_POLARIZABILITY>
29.025810554260516

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
methyl (2R)-2-methyl-4-{4-[(1E)-3-oxoprop-1-en-1-yl]phenoxy}butanoate

> <JCHEM_LOGP>
2.512336326

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-4.219712268268804

> <JCHEM_POLAR_SURFACE_AREA>
52.6

> <JCHEM_REFRACTIVITY>
73.48030000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
8

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
methyl (2R)-2-methyl-4-{4-[(1E)-3-oxoprop-1-en-1-yl]phenoxy}butanoate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 08-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   08-SEP-22         0                                  
HETATM    1  C   UNK     0       1.334  -6.930   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       2.667  -7.700   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       4.001  -6.930   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0       4.001  -5.390   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       5.335  -7.700   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       5.335  -9.240   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       6.668  -6.930   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       8.002  -7.700   0.000  0.00  0.00           C+0
HETATM    9  O   UNK     0       9.336  -6.930   0.000  0.00  0.00           O+0
HETATM   10  C   UNK     0      10.669  -7.700   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      12.003  -6.930   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      13.337  -7.700   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      13.337  -9.240   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      14.670 -10.010   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      14.670 -11.550   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      16.004 -12.320   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0      17.338 -11.550   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0      12.003 -10.010   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      10.669  -9.240   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6    7                                                  
CONECT    6    5                                                            
CONECT    7    5    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11   19                                                  
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14   18                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16                                                            
CONECT   18   13   19                                                       
CONECT   19   18   10                                                       
MASTER        0    0    0    0    0    0    0    0   19    0   38    0
END

View in JSmol

Synonyms

Value	Source
(R)-2-Methyl-4-[4-(3-oxo-1-propenyl)phenoxy]butanoate methyl ester	Generator

Chemical Formula

C₁₅H₁₈O₄

Average Mass

262.3050 Da

Monoisotopic Mass

262.12051 Da

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

COC(=O)[C@H](C)CCOC1=CC=C(\C=C\C=O)C=C1

InChI Identifier

InChI=1S/C15H18O4/c1-12(15(17)18-2)9-11-19-14-7-5-13(6-8-14)4-3-10-16/h3-8,10,12H,9,11H2,1-2H3/b4-3+/t12-/m1/s1

InChI Key

HTNLOKKMGKFIFP-AAOUONPWSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Aralia bipinnata	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as cinnamaldehydes. These are organic aromatic compounds containing a cinnamlaldehyde moiety, consisting of a benzene and an aldehyde group to form 3-phenylprop-2-enal.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Cinnamaldehydes

Sub Class

Not Available

Direct Parent

Cinnamaldehydes

Alternative Parents

Substituents

Cinnamaldehyde
Phenoxy compound
Styrene
Phenol ether
Alkyl aryl ether
Fatty acid ester
Monocyclic benzene moiety
Fatty acyl
Benzenoid
Alpha,beta-unsaturated aldehyde
Enal
Methyl ester
Carboxylic acid ester
Ether
Carboxylic acid derivative
Monocarboxylic acid or derivatives
Organic oxygen compound
Hydrocarbon derivative
Carbonyl group
Organic oxide
Aldehyde
Organooxygen compound
Aromatic homomonocyclic compound

Molecular Framework

Aromatic homomonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

101884621

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for methyl (2r)-2-methyl-4-{4-[(1e)-3-oxoprop-1-en-1-yl]phenoxy}butanoate (NP0271868)

MOL for NP0271868 (methyl (2r)-2-methyl-4-{4-[(1e)-3-oxoprop-1-en-1-yl]phenoxy}butanoate)

3D MOL for NP0271868 (methyl (2r)-2-methyl-4-{4-[(1e)-3-oxoprop-1-en-1-yl]phenoxy}butanoate)

3D SDF for NP0271868 (methyl (2r)-2-methyl-4-{4-[(1e)-3-oxoprop-1-en-1-yl]phenoxy}butanoate)

3D-SDF for NP0271868 (methyl (2r)-2-methyl-4-{4-[(1e)-3-oxoprop-1-en-1-yl]phenoxy}butanoate)

PDB for NP0271868 (methyl (2r)-2-methyl-4-{4-[(1e)-3-oxoprop-1-en-1-yl]phenoxy}butanoate)

3D PDB for NP0271868 (methyl (2r)-2-methyl-4-{4-[(1e)-3-oxoprop-1-en-1-yl]phenoxy}butanoate)

SMILES for NP0271868 (methyl (2r)-2-methyl-4-{4-[(1e)-3-oxoprop-1-en-1-yl]phenoxy}butanoate)

INCHI for NP0271868 (methyl (2r)-2-methyl-4-{4-[(1e)-3-oxoprop-1-en-1-yl]phenoxy}butanoate)

Structure for NP0271868 (methyl (2r)-2-methyl-4-{4-[(1e)-3-oxoprop-1-en-1-yl]phenoxy}butanoate)

3D Structure for NP0271868 (methyl (2r)-2-methyl-4-{4-[(1e)-3-oxoprop-1-en-1-yl]phenoxy}butanoate)