Np mrd loader

Record Information
Version2.0
Created at2022-09-08 17:10:52 UTC
Updated at2022-09-08 17:10:52 UTC
NP-MRD IDNP0271029
Secondary Accession NumbersNone
Natural Product Identification
Common Name(1r,2s,5r,6r,9s,10s)-10-hexyl-11,12-dioxatricyclo[7.2.1.0¹,⁶]dodecane-2,5-diol
DescriptionKoninginin A belongs to the class of organic compounds known as oxepanes. Oxepanes are compounds containing an oxepane ring, which is a seven-member saturated aliphatic heterocycle with one oxygen and six carbon atoms. (1r,2s,5r,6r,9s,10s)-10-hexyl-11,12-dioxatricyclo[7.2.1.0¹,⁶]dodecane-2,5-diol is found in Trichoderma koningii. (1r,2s,5r,6r,9s,10s)-10-hexyl-11,12-dioxatricyclo[7.2.1.0¹,⁶]dodecane-2,5-diol was first documented in 2005 (PMID: 15806554). Based on a literature review a small amount of articles have been published on Koninginin A (PMID: 28535995) (PMID: 24273867) (PMID: 24891425).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC16H28O4
Average Mass284.3960 Da
Monoisotopic Mass284.19876 Da
IUPAC Name(1R,2S,5R,6R,9S,10S)-10-hexyl-11,12-dioxatricyclo[7.2.1.0^{1,6}]dodecane-2,5-diol
Traditional Name(1R,2S,5R,6R,9S,10S)-10-hexyl-11,12-dioxatricyclo[7.2.1.0^{1,6}]dodecane-2,5-diol
CAS Registry NumberNot Available
SMILES
CCCCCC[C@@H]1O[C@@]23O[C@H]1CC[C@@H]2[C@H](O)CC[C@@H]3O
InChI Identifier
InChI=1S/C16H28O4/c1-2-3-4-5-6-13-14-9-7-11-12(17)8-10-15(18)16(11,19-13)20-14/h11-15,17-18H,2-10H2,1H3/t11-,12-,13+,14+,15+,16-/m1/s1
InChI KeyGBDGOAVPCDIMFE-VTMBPIDISA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Trichoderma koningiiLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as oxepanes. Oxepanes are compounds containing an oxepane ring, which is a seven-member saturated aliphatic heterocycle with one oxygen and six carbon atoms.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassOxepanes
Sub ClassNot Available
Direct ParentOxepanes
Alternative Parents
Substituents
  • Ketal
  • Oxepane
  • Oxane
  • Cyclic alcohol
  • Meta-dioxolane
  • Secondary alcohol
  • Oxacycle
  • Acetal
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Alcohol
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP3ChemAxon
pKa (Strongest Acidic)13.22ChemAxon
pKa (Strongest Basic)-2.9ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area58.92 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity75.36 m³·mol⁻¹ChemAxon
Polarizability0 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDC00023951
Chemspider ID71044095
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound98051255
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Rand TG, Chang CT, McMullin DR, Miller JD: Inflammation-associated gene expression in RAW 264.7 macrophages induced by toxins from fungi common on damp building materials. Toxicol In Vitro. 2017 Sep;43:16-20. doi: 10.1016/j.tiv.2017.05.015. Epub 2017 May 20. [PubMed:28535995 ]
  2. Tarawneh AH, Leon F, Radwan MM, Rosa LH, Cutler SJ: Secondary metabolites from the fungus Emericella nidulans. Nat Prod Commun. 2013 Sep;8(9):1285-8. [PubMed:24273867 ]
  3. McMullin DR, Nsiama TK, Miller JD: Secondary metabolites from Penicillium corylophilum isolated from damp buildings. Mycologia. 2014 Jul-Aug;106(4):621-8. doi: 10.3852/13-265. Epub 2014 Jun 2. [PubMed:24891425 ]
  4. Mori K: Synthetic examination of incorrectly proposed structures of biomolecules. Chem Rec. 2005;5(1):1-16. doi: 10.1002/tcr.20030. [PubMed:15806554 ]
  5. LOTUS database [Link]