NP-MRD: Showing NP-Card for (1r,2s,3s,10z,16r,22e,27s)-5,18-diazapentacyclo[12.12.1.1¹,⁵.0²,¹⁶.0¹⁸,²⁷]octacosa-10,14,22-trien-3-ol (NP0268500)

Jump To Section:

Identification Spectra BioTaxonomy ChemoTaxonomy Physical properties Links References XML

Record Information

Version

2.0

Created at

2022-09-08 13:38:32 UTC

Updated at

2022-09-08 13:38:32 UTC

NP-MRD ID

NP0268500

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1r,2s,3s,10z,16r,22e,27s)-5,18-diazapentacyclo[12.12.1.1¹,⁵.0²,¹⁶.0¹⁸,²⁷]octacosa-10,14,22-trien-3-ol

Description

Xestocyclamine A belongs to the class of organic compounds known as naphthyridines. Naphthyridines are compounds containing a naphthyridine moiety, a naphthalene in which a carbon atom has been replaced by a nitrogen in each of the two rings. The naphthyridine skeleton can also be described as an assembly two fused pyridine rings, which do not share their nitrogen atom. Based on a literature review very few articles have been published on Xestocyclamine A.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309082215382D          

 29 33  0  0  1  0            999 V2000
    5.8687    1.7692    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2022    1.2830    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.3734    0.4307    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7589   -0.1499    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.2393   -0.9187    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5297   -1.4765    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6462   -1.6770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7823   -1.3986    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1703   -0.7247    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0415    0.1780    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4542    1.0972    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8642    1.9824    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8093    1.9388    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8577    2.1725    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0044    2.7181    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.1516    2.9779    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5154    2.2558    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.0400    1.4829    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1497    1.7283    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7942    0.9472    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5617    0.4447    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0343   -0.2511    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6394   -0.7909    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3179   -0.3414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2241    0.4765    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8496    1.0469    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.0599    0.2494    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4363    1.7101    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.0282    1.3798    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
  2  1  1  6  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 15 14  1  6  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  6  0  0  0
  4 27  1  0  0  0  0
 28 26  1  6  0  0  0
  2 28  1  0  0  0  0
 15 28  1  0  0  0  0
 26 29  1  0  0  0  0
 13 29  1  0  0  0  0
 29 17  1  1  0  0  0
M  END

     RDKit          3D

 69 73  0  0  0  0  0  0  0  0999 V2000
   -0.5081   -2.3180   -2.8330 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0554   -2.4673   -1.5012 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.2259   -2.7568   -0.5977 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8220   -1.5482   -0.0778 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9565   -1.9587    0.7397 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2746   -1.7439    0.0741 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9929   -0.5078    0.6316 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2703    0.7660    0.2101 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9106    1.5908    1.3639 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1531    2.6512    1.1986 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3269    2.8376   -0.0212 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8798    2.5816    0.2472 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3070    1.4140   -0.3867 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7136    0.8161   -1.5144 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3638   -0.0727   -2.1070 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.6037    0.8387   -2.0689 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9858    0.9331   -0.6834 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.6655    2.1770   -0.4650 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1259    1.9872   -0.8151 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9454    1.4016    0.2844 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0707    0.9923    1.3955 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8074   -0.2652    1.6738 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7745   -1.3703    0.6863 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4967   -2.2057    0.8555 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3239   -1.4282    1.2801 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4978   -0.7470    0.2652 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.9440   -0.7777    0.7377 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6705   -1.2161   -1.1453 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.8811    0.7468    0.2353 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.2377   -2.9564   -3.0290 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5764   -3.3793   -1.5146 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0168   -3.2983   -1.1571 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9537   -3.4020    0.2684 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8864   -3.0380    1.0173 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9725   -1.4116    1.7154 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9567   -2.6005    0.1202 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0993   -1.5172   -1.0062 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9115   -0.6073    1.7481 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0522   -0.5116    0.3310 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9962    1.3250   -0.4397 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4458    0.4683   -0.4298 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2816    1.3111    2.3651 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1347    3.4043    1.9742 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7222    2.3127   -0.9060 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4165    3.9371   -0.2761 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2291    3.4687   -0.0103 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7516    2.4847    1.3646 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6657    0.9277   -1.9674 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1201   -0.4037   -3.1137 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3961    0.3154   -2.6261 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3456    1.8286   -2.5108 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5062    2.6194    0.5280 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2685    2.9051   -1.2329 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1346    1.3527   -1.7482 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5203    2.9774   -1.1557 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5521    0.5720   -0.1225 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6486    2.1842    0.6407 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6279    1.7840    2.0085 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5963   -0.5252    2.7068 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9302   -1.0480   -0.3473 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6749   -2.0119    0.9281 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3676   -2.8754   -0.0007 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7634   -2.9038    1.7109 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6800   -0.6574    2.0258 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6780   -2.1039    1.9194 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3952    0.2344    0.8445 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0215   -1.2063    1.7830 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7627   -1.4319   -1.2911 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1253    1.1266    1.2230 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4 27  1  0
 27 26  1  0
 26 25  1  1
 25 24  1  0
 24 23  1  0
 23 22  1  0
 22 21  2  0
 21 20  1  0
 20 19  1  0
 19 18  1  0
 18 17  1  0
 17 16  1  0
 16 15  1  0
 15 14  1  0
 14 13  2  0
 13 12  1  0
 12 11  1  0
 11 10  1  0
 10  9  2  0
  9  8  1  0
  8  7  1  0
  7  6  1  0
  6  5  1  0
 13 29  1  0
 15 28  1  0
 28  2  1  0
  5  4  1  0
 29 26  1  0
 28 26  1  0
 29 17  1  0
  1 30  1  0
  2 31  1  6
  3 32  1  0
  3 33  1  0
 27 66  1  0
 27 67  1  0
 25 64  1  0
 25 65  1  0
 24 62  1  0
 24 63  1  0
 23 60  1  0
 23 61  1  0
 22 59  1  0
 21 58  1  0
 20 56  1  0
 20 57  1  0
 19 54  1  0
 19 55  1  0
 18 52  1  0
 18 53  1  0
 16 50  1  0
 16 51  1  0
 15 49  1  6
 14 48  1  0
 12 46  1  0
 12 47  1  0
 11 44  1  0
 11 45  1  0
 10 43  1  0
  9 42  1  0
  8 40  1  0
  8 41  1  0
  7 38  1  0
  7 39  1  0
  6 36  1  0
  6 37  1  0
  5 34  1  0
  5 35  1  0
 29 69  1  1
 28 68  1  1
M  END


  Mrv1652309082215382D          

 29 33  0  0  1  0            999 V2000
    5.8687    1.7692    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.2022    1.2830    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.3734    0.4307    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7589   -0.1499    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.2393   -0.9187    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5297   -1.4765    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6462   -1.6770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7823   -1.3986    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1703   -0.7247    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0415    0.1780    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4542    1.0972    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8642    1.9824    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8093    1.9388    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8577    2.1725    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0044    2.7181    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.1516    2.9779    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5154    2.2558    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.0400    1.4829    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1497    1.7283    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7942    0.9472    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5617    0.4447    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0343   -0.2511    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6394   -0.7909    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3179   -0.3414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2241    0.4765    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8496    1.0469    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.0599    0.2494    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4363    1.7101    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.0282    1.3798    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
  2  1  1  6  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 15 14  1  6  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  6  0  0  0
  4 27  1  0  0  0  0
 28 26  1  6  0  0  0
  2 28  1  0  0  0  0
 15 28  1  0  0  0  0
 26 29  1  0  0  0  0
 13 29  1  0  0  0  0
 29 17  1  1  0  0  0
M  END
> <DATABASE_ID>
NP0268500

> <DATABASE_NAME>
NP-MRD

> <SMILES>
O[C@@H]1CN2C[C@]34CCC\C=C\CCCN5C[C@H](C=C(CC\C=C/CCCC2)[C@@H]35)[C@H]14

> <INCHI_IDENTIFIER>
InChI=1S/C26H40N2O/c29-23-19-27-15-11-7-3-1-5-9-13-21-17-22-18-28-16-12-8-4-2-6-10-14-26(20-27,24(22)23)25(21)28/h1-2,4-5,17,22-25,29H,3,6-16,18-20H2/b4-2+,5-1-/t22-,23+,24+,25-,26-/m0/s1

> <INCHI_KEY>
RAKIOMSIKLAZMR-NXNNRCTASA-N

> <FORMULA>
C26H40N2O

> <MOLECULAR_WEIGHT>
396.619

> <EXACT_MASS>
396.314063916

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
69

> <JCHEM_AVERAGE_POLARIZABILITY>
46.753325663777254

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1R,2S,3S,10Z,16R,22E,27S)-5,18-diazapentacyclo[12.12.1.1^{1,5}.0^{2,16}.0^{18,27}]octacosa-10,14,22-trien-3-ol

> <JCHEM_LOGP>
4.1250586416666675

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
2

> <JCHEM_PKA_STRONGEST_ACIDIC>
14.535930064766038

> <JCHEM_PKA_STRONGEST_BASIC>
10.136152795930968

> <JCHEM_POLAR_SURFACE_AREA>
26.71

> <JCHEM_REFRACTIVITY>
124.8406

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(1R,2S,3S,10Z,16R,22E,27S)-5,18-diazapentacyclo[12.12.1.1^{1,5}.0^{2,16}.0^{18,27}]octacosa-10,14,22-trien-3-ol

> <JCHEM_VEBER_RULE>
1

$$$$

HEADER    PROTEIN                                 08-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   08-SEP-22         0                                  
HETATM    1  O   UNK     0      10.955   3.303   0.000  0.00  0.00           O+0
HETATM    2  C   UNK     0       9.711   2.395   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      10.030   0.804   0.000  0.00  0.00           C+0
HETATM    4  N   UNK     0       8.883  -0.280   0.000  0.00  0.00           N+0
HETATM    5  C   UNK     0       7.913  -1.715   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       6.589  -2.756   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       4.940  -3.130   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       3.327  -2.611   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       2.185  -1.353   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       1.944   0.332   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       2.714   2.048   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       3.480   3.700   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       5.244   3.619   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       7.201   4.055   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       7.475   5.074   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       5.883   5.559   0.000  0.00  0.00           C+0
HETATM   17  N   UNK     0       4.695   4.211   0.000  0.00  0.00           N+0
HETATM   18  C   UNK     0       3.808   2.768   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       2.146   3.226   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       1.483   1.768   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       2.915   0.830   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       3.797  -0.469   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       4.927  -1.476   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       6.193  -0.637   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       6.018   0.889   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       7.186   1.954   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       7.578   0.466   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       8.281   3.192   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       5.653   2.576   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   28                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5   27                                                  
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14   29                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16   28                                                  
CONECT   16   15   17                                                       
CONECT   17   16   18   29                                                  
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25   27   28   29                                             
CONECT   27   26    4                                                       
CONECT   28   26    2   15                                                  
CONECT   29   26   13   17                                                  
MASTER        0    0    0    0    0    0    0    0   29    0   66    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₆H₄₀N₂O

Average Mass

396.6190 Da

Monoisotopic Mass

396.31406 Da

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

O[C@@H]1CN2C[C@]34CCC\C=C\CCCN5C[C@H](C=C(CC\C=C/CCCC2)[C@@H]35)[C@H]14

InChI Identifier

InChI=1S/C26H40N2O/c29-23-19-27-15-11-7-3-1-5-9-13-21-17-22-18-28-16-12-8-4-2-6-10-14-26(20-27,24(22)23)25(21)28/h1-2,4-5,17,22-25,29H,3,6-16,18-20H2/b4-2+,5-1-/t22-,23+,24+,25-,26-/m0/s1

InChI Key

RAKIOMSIKLAZMR-NXNNRCTASA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as naphthyridines. Naphthyridines are compounds containing a naphthyridine moiety, a naphthalene in which a carbon atom has been replaced by a nitrogen in each of the two rings. The naphthyridine skeleton can also be described as an assembly two fused pyridine rings, which do not share their nitrogen atom.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Diazanaphthalenes

Sub Class

Naphthyridines

Direct Parent

Naphthyridines

Alternative Parents

Substituents

Naphthyridine
Piperidine
Tertiary aliphatic amine
Tertiary amine
Secondary alcohol
1,2-aminoalcohol
Azacycle
Organic nitrogen compound
Organic oxygen compound
Hydrocarbon derivative
Organooxygen compound
Organonitrogen compound
Amine
Alcohol
Aliphatic heteropolycyclic compound

Molecular Framework

Aliphatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

101185845

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (1r,2s,3s,10z,16r,22e,27s)-5,18-diazapentacyclo[12.12.1.1¹,⁵.0²,¹⁶.0¹⁸,²⁷]octacosa-10,14,22-trien-3-ol (NP0268500)

MOL for NP0268500 ((1r,2s,3s,10z,16r,22e,27s)-5,18-diazapentacyclo[12.12.1.1¹,⁵.0²,¹⁶.0¹⁸,²⁷]octacosa-10,14,22-trien-3-ol)

3D MOL for NP0268500 ((1r,2s,3s,10z,16r,22e,27s)-5,18-diazapentacyclo[12.12.1.1¹,⁵.0²,¹⁶.0¹⁸,²⁷]octacosa-10,14,22-trien-3-ol)

3D SDF for NP0268500 ((1r,2s,3s,10z,16r,22e,27s)-5,18-diazapentacyclo[12.12.1.1¹,⁵.0²,¹⁶.0¹⁸,²⁷]octacosa-10,14,22-trien-3-ol)

3D-SDF for NP0268500 ((1r,2s,3s,10z,16r,22e,27s)-5,18-diazapentacyclo[12.12.1.1¹,⁵.0²,¹⁶.0¹⁸,²⁷]octacosa-10,14,22-trien-3-ol)

PDB for NP0268500 ((1r,2s,3s,10z,16r,22e,27s)-5,18-diazapentacyclo[12.12.1.1¹,⁵.0²,¹⁶.0¹⁸,²⁷]octacosa-10,14,22-trien-3-ol)

3D PDB for NP0268500 ((1r,2s,3s,10z,16r,22e,27s)-5,18-diazapentacyclo[12.12.1.1¹,⁵.0²,¹⁶.0¹⁸,²⁷]octacosa-10,14,22-trien-3-ol)

SMILES for NP0268500 ((1r,2s,3s,10z,16r,22e,27s)-5,18-diazapentacyclo[12.12.1.1¹,⁵.0²,¹⁶.0¹⁸,²⁷]octacosa-10,14,22-trien-3-ol)

INCHI for NP0268500 ((1r,2s,3s,10z,16r,22e,27s)-5,18-diazapentacyclo[12.12.1.1¹,⁵.0²,¹⁶.0¹⁸,²⁷]octacosa-10,14,22-trien-3-ol)

Structure for NP0268500 ((1r,2s,3s,10z,16r,22e,27s)-5,18-diazapentacyclo[12.12.1.1¹,⁵.0²,¹⁶.0¹⁸,²⁷]octacosa-10,14,22-trien-3-ol)

3D Structure for NP0268500 ((1r,2s,3s,10z,16r,22e,27s)-5,18-diazapentacyclo[12.12.1.1¹,⁵.0²,¹⁶.0¹⁸,²⁷]octacosa-10,14,22-trien-3-ol)