NP-MRD: Showing NP-Card for 4-{[5-(hydroxymethyl)-5,8a-dimethyl-2-methylidene-hexahydro-1h-naphthalen-1-yl]methoxy}-5-methoxy-3-(methoxycarbonyl)-5-oxopentanoic acid (NP0265570)

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Record Information

Version

2.0

Created at

2022-09-08 09:35:58 UTC

Updated at

2022-09-08 09:35:58 UTC

NP-MRD ID

NP0265570

Secondary Accession Numbers

None

Natural Product Identification

Common Name

4-{[5-(hydroxymethyl)-5,8a-dimethyl-2-methylidene-hexahydro-1h-naphthalen-1-yl]methoxy}-5-methoxy-3-(methoxycarbonyl)-5-oxopentanoic acid

Description

4-{[5-(Hydroxymethyl)-5,8a-dimethyl-2-methylidene-decahydronaphthalen-1-yl]methoxy}-5-methoxy-3-(methoxycarbonyl)-5-oxopentanoic acid belongs to the class of organic compounds known as tricarboxylic acids and derivatives. These are carboxylic acids containing exactly three carboxyl groups. 4-{[5-(hydroxymethyl)-5,8a-dimethyl-2-methylidene-hexahydro-1h-naphthalen-1-yl]methoxy}-5-methoxy-3-(methoxycarbonyl)-5-oxopentanoic acid is found in Cryptoporus volvatus. 4-{[5-(Hydroxymethyl)-5,8a-dimethyl-2-methylidene-decahydronaphthalen-1-yl]methoxy}-5-methoxy-3-(methoxycarbonyl)-5-oxopentanoic acid is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004231519292D          

 31 32  0  0  0  0            999 V2000
    5.0013   -3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0434    3.1070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.1040    3.1070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8218    3.8822    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.2881    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2881    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  7  9  1  0  0  0  0
  5 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 14 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 19 21  1  0  0  0  0
 21 22  1  0  0  0  0
 19 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 13 26  1  0  0  0  0
 18 26  1  0  0  0  0
 26 27  1  0  0  0  0
 10 28  1  0  0  0  0
 28 29  2  0  0  0  0
 28 30  1  0  0  0  0
 30 31  1  0  0  0  0
M  END

     RDKit          3D

 67 68  0  0  0  0  0  0  0  0999 V2000
   -0.1639    1.9178    0.7896 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8598    0.8157    0.8650 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9180    0.6538    1.9369 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7785   -0.5145    1.6186 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1631   -0.6838    0.1596 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.4516   -0.0173   -0.1142 C   0  0  2  0  0  0  0  0  0  0  0  0
   -5.3272   -0.0381    1.1333 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3173   -0.6156   -1.1965 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7244   -0.6390   -2.4489 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2377    1.4278   -0.4800 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2685    1.6306   -1.5936 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2016    0.6504   -1.7662 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0546   -0.4751   -0.8029 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.7393   -1.7471   -1.6199 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7635   -0.3620    0.0133 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.4814   -0.4429   -0.8161 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5470   -0.4599    0.1096 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7780   -0.5370   -0.5851 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.4508   -1.7749   -0.2142 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9027   -2.5532    0.6064 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6834   -2.1810   -0.7045 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.3306   -3.3658   -0.3512 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5283    0.7124   -0.2389 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.8593    0.8841   -0.8636 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9190    0.8637   -2.3256 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8766    0.7488   -2.9990 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1214    0.9701   -3.0043 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7544    0.7908    1.2513 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4373   -0.2036    1.9254 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2837    1.8961    1.8593 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.5052    1.9931    3.2559 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3409    2.7183    1.4924 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5930    2.0358    0.0239 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3118    0.3845    2.8551 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4050    1.5863    2.2001 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2331   -1.4454    1.9707 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6418   -0.4578    2.3033 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4020   -1.8026    0.0864 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4056   -1.0395    1.5935 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1163    0.7900    1.8282 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4085    0.1726    0.8262 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2041    0.0555   -1.3010 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7363   -1.6003   -0.9013 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2434   -0.2012   -3.1529 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9678    1.9619    0.4495 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2629    1.8252   -0.7443 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8914    1.6845   -2.5392 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8765    2.6736   -1.4922 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1787    0.2727   -2.8350 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2159    1.2150   -1.7344 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1372   -1.3873   -2.4794 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6092   -2.2476   -2.0149 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1983   -2.4914   -0.9967 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7255   -1.2752    0.6757 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5117   -1.4457   -1.2876 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5895    0.3738   -1.5359 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5816   -0.5618   -1.6701 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3684   -3.1911    0.0439 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7716   -4.0123    0.3244 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4936   -3.9423   -1.3073 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8912    1.5807   -0.4920 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6519    0.2312   -0.3951 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2095    1.9205   -0.5658 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6080    0.0997   -3.1939 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8799    1.0660    3.6977 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5932    2.3286    3.8060 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2788    2.7808    3.4042 H   0  0  0  0  0  0  0  0  0  0  0  0
 31 30  1  0
 30 28  1  0
 28 29  2  0
 28 23  1  0
 23 24  1  0
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 25 27  1  0
 25 26  2  0
 23 18  1  0
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 16 15  1  0
 15  2  1  0
  2  1  2  3
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
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  6  8  1  0
  8  9  1  0
  6 10  1  0
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 11 12  1  0
 12 13  1  0
 13 14  1  6
 18 19  1  0
 19 20  2  0
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 21 22  1  0
 13 15  1  0
 13  5  1  0
 31 65  1  0
 31 66  1  0
 31 67  1  0
 23 61  1  6
 24 62  1  0
 24 63  1  0
 27 64  1  0
 18 57  1  6
 16 55  1  0
 16 56  1  0
 15 54  1  1
  1 32  1  0
  1 33  1  0
  3 34  1  0
  3 35  1  0
  4 36  1  0
  4 37  1  0
  5 38  1  1
  7 39  1  0
  7 40  1  0
  7 41  1  0
  8 42  1  0
  8 43  1  0
  9 44  1  0
 10 45  1  0
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 11 47  1  0
 11 48  1  0
 12 49  1  0
 12 50  1  0
 14 51  1  0
 14 52  1  0
 14 53  1  0
 22 58  1  0
 22 59  1  0
 22 60  1  0
M  END


  Mrv1533004231519292D          

 31 32  0  0  0  0            999 V2000
    5.0013   -3.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0013   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7158    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4302    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0434    3.1070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.1040    3.1070    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8218    3.8822    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.2881    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2881    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1447   -2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8592   -1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.5737   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  7  9  1  0  0  0  0
  5 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 14 16  1  0  0  0  0
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 17 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
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 13 26  1  0  0  0  0
 18 26  1  0  0  0  0
 26 27  1  0  0  0  0
 10 28  1  0  0  0  0
 28 29  2  0  0  0  0
 28 30  1  0  0  0  0
 30 31  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0265570

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC(=O)C(CC(O)=O)C(OCC1C(=C)CCC2C(C)(CO)CCCC12C)C(=O)OC

> <INCHI_IDENTIFIER>
InChI=1S/C23H36O8/c1-14-7-8-17-22(2,13-24)9-6-10-23(17,3)16(14)12-31-19(21(28)30-5)15(11-18(25)26)20(27)29-4/h15-17,19,24H,1,6-13H2,2-5H3,(H,25,26)

> <INCHI_KEY>
FCYLLGSBJNTSAP-UHFFFAOYSA-N

> <FORMULA>
C23H36O8

> <MOLECULAR_WEIGHT>
440.533

> <EXACT_MASS>
440.241018119

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
67

> <JCHEM_AVERAGE_POLARIZABILITY>
46.71963936493003

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
4-{[5-(hydroxymethyl)-5,8a-dimethyl-2-methylidene-decahydronaphthalen-1-yl]methoxy}-5-methoxy-3-(methoxycarbonyl)-5-oxopentanoic acid

> <ALOGPS_LOGP>
2.65

> <JCHEM_LOGP>
2.1480347193333333

> <ALOGPS_LOGS>
-4.10

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
18.59233662010812

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.1399802912390715

> <JCHEM_PKA_STRONGEST_BASIC>
-1.22707646454311

> <JCHEM_POLAR_SURFACE_AREA>
119.36000000000003

> <JCHEM_REFRACTIVITY>
111.84709999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
11

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
3.46e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
4-{[5-(hydroxymethyl)-5,8a-dimethyl-2-methylidene-hexahydro-1H-naphthalen-1-yl]methoxy}-5-methoxy-3-(methoxycarbonyl)-5-oxopentanoic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 23-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   23-APR-15         0                                  
HETATM    1  C   UNK     0       9.336  -6.930   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       9.336  -5.390   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0      10.669  -4.620   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0      12.003  -5.390   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0      10.669  -3.080   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       9.336  -2.310   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       8.002  -3.080   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       6.668  -2.310   0.000  0.00  0.00           O+0
HETATM    9  O   UNK     0       8.002  -4.620   0.000  0.00  0.00           O+0
HETATM   10  C   UNK     0      12.003  -2.310   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0      12.003  -0.770   0.000  0.00  0.00           O+0
HETATM   12  C   UNK     0      13.337   0.000   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      13.337   1.540   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      12.003   2.310   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      10.669   1.540   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      12.003   3.850   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      13.337   4.620   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      14.670   3.850   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      16.004   4.620   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      15.014   5.800   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      16.994   5.800   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0      16.467   7.247   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0      17.338   3.850   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      17.338   2.310   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      16.004   1.540   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      14.670   2.310   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      14.670   0.770   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      13.337  -3.080   0.000  0.00  0.00           C+0
HETATM   29  O   UNK     0      13.337  -4.620   0.000  0.00  0.00           O+0
HETATM   30  O   UNK     0      14.670  -2.310   0.000  0.00  0.00           O+0
HETATM   31  C   UNK     0      16.004  -3.080   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6   10                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8    9                                                  
CONECT    8    7                                                            
CONECT    9    7                                                            
CONECT   10    5   11   28                                                  
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14   26                                                  
CONECT   14   13   15   16                                                  
CONECT   15   14                                                            
CONECT   16   14   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19   26                                                  
CONECT   19   18   20   21   23                                             
CONECT   20   19                                                            
CONECT   21   19   22                                                       
CONECT   22   21                                                            
CONECT   23   19   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25   13   18   27                                             
CONECT   27   26                                                            
CONECT   28   10   29   30                                                  
CONECT   29   28                                                            
CONECT   30   28   31                                                       
CONECT   31   30                                                            
MASTER        0    0    0    0    0    0    0    0   31    0   64    0
END

View in JSmol

Synonyms

Value	Source
4-{[5-(hydroxymethyl)-5,8a-dimethyl-2-methylidene-decahydronaphthalen-1-yl]methoxy}-5-methoxy-3-(methoxycarbonyl)-5-oxopentanoate	Generator

Chemical Formula

C₂₃H₃₆O₈

Average Mass

440.5330 Da

Monoisotopic Mass

440.24102 Da

IUPAC Name

4-{[5-(hydroxymethyl)-5,8a-dimethyl-2-methylidene-decahydronaphthalen-1-yl]methoxy}-5-methoxy-3-(methoxycarbonyl)-5-oxopentanoic acid

Traditional Name

4-{[5-(hydroxymethyl)-5,8a-dimethyl-2-methylidene-hexahydro-1H-naphthalen-1-yl]methoxy}-5-methoxy-3-(methoxycarbonyl)-5-oxopentanoic acid

CAS Registry Number

Not Available

SMILES

COC(=O)C(CC(O)=O)C(OCC1C(=C)CCC2C(C)(CO)CCCC12C)C(=O)OC

InChI Identifier

InChI=1S/C23H36O8/c1-14-7-8-17-22(2,13-24)9-6-10-23(17,3)16(14)12-31-19(21(28)30-5)15(11-18(25)26)20(27)29-4/h15-17,19,24H,1,6-13H2,2-5H3,(H,25,26)

InChI Key

FCYLLGSBJNTSAP-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Cryptoporus volvatus	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as tricarboxylic acids and derivatives. These are carboxylic acids containing exactly three carboxyl groups.

Kingdom

Organic compounds

Super Class

Organic acids and derivatives

Class

Carboxylic acids and derivatives

Sub Class

Tricarboxylic acids and derivatives

Direct Parent

Tricarboxylic acids and derivatives

Alternative Parents

Substituents

Tricarboxylic acid or derivatives
Fatty acid ester
Monosaccharide
Fatty acyl
Methyl ester
Carboxylic acid ester
Ether
Dialkyl ether
Carboxylic acid
Hydrocarbon derivative
Primary alcohol
Organooxygen compound
Organic oxide
Organic oxygen compound
Carbonyl group
Alcohol
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	2.65	ALOGPS
logP	2.15	ChemAxon
logS	-4.1	ALOGPS
pKa (Strongest Acidic)	4.14	ChemAxon
pKa (Strongest Basic)	-1.2	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	119.36 Å²	ChemAxon
Rotatable Bond Count	11	ChemAxon
Refractivity	111.85 m³·mol⁻¹	ChemAxon
Polarizability	46.72 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 4-{[5-(hydroxymethyl)-5,8a-dimethyl-2-methylidene-hexahydro-1h-naphthalen-1-yl]methoxy}-5-methoxy-3-(methoxycarbonyl)-5-oxopentanoic acid (NP0265570)

MOL for NP0265570 (4-{[5-(hydroxymethyl)-5,8a-dimethyl-2-methylidene-hexahydro-1h-naphthalen-1-yl]methoxy}-5-methoxy-3-(methoxycarbonyl)-5-oxopentanoic acid)

3D MOL for NP0265570 (4-{[5-(hydroxymethyl)-5,8a-dimethyl-2-methylidene-hexahydro-1h-naphthalen-1-yl]methoxy}-5-methoxy-3-(methoxycarbonyl)-5-oxopentanoic acid)

3D SDF for NP0265570 (4-{[5-(hydroxymethyl)-5,8a-dimethyl-2-methylidene-hexahydro-1h-naphthalen-1-yl]methoxy}-5-methoxy-3-(methoxycarbonyl)-5-oxopentanoic acid)

3D-SDF for NP0265570 (4-{[5-(hydroxymethyl)-5,8a-dimethyl-2-methylidene-hexahydro-1h-naphthalen-1-yl]methoxy}-5-methoxy-3-(methoxycarbonyl)-5-oxopentanoic acid)

PDB for NP0265570 (4-{[5-(hydroxymethyl)-5,8a-dimethyl-2-methylidene-hexahydro-1h-naphthalen-1-yl]methoxy}-5-methoxy-3-(methoxycarbonyl)-5-oxopentanoic acid)

3D PDB for NP0265570 (4-{[5-(hydroxymethyl)-5,8a-dimethyl-2-methylidene-hexahydro-1h-naphthalen-1-yl]methoxy}-5-methoxy-3-(methoxycarbonyl)-5-oxopentanoic acid)

SMILES for NP0265570 (4-{[5-(hydroxymethyl)-5,8a-dimethyl-2-methylidene-hexahydro-1h-naphthalen-1-yl]methoxy}-5-methoxy-3-(methoxycarbonyl)-5-oxopentanoic acid)

INCHI for NP0265570 (4-{[5-(hydroxymethyl)-5,8a-dimethyl-2-methylidene-hexahydro-1h-naphthalen-1-yl]methoxy}-5-methoxy-3-(methoxycarbonyl)-5-oxopentanoic acid)

Structure for NP0265570 (4-{[5-(hydroxymethyl)-5,8a-dimethyl-2-methylidene-hexahydro-1h-naphthalen-1-yl]methoxy}-5-methoxy-3-(methoxycarbonyl)-5-oxopentanoic acid)

3D Structure for NP0265570 (4-{[5-(hydroxymethyl)-5,8a-dimethyl-2-methylidene-hexahydro-1h-naphthalen-1-yl]methoxy}-5-methoxy-3-(methoxycarbonyl)-5-oxopentanoic acid)