NP-MRD: Showing NP-Card for 3-(3-hydroxy-4-methoxyphenyl)-7-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}chromen-4-one (NP0265510)

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Record Information

Version

2.0

Created at

2022-09-08 09:31:05 UTC

Updated at

2022-09-08 09:31:05 UTC

NP-MRD ID

NP0265510

Secondary Accession Numbers

None

Natural Product Identification

Common Name

3-(3-hydroxy-4-methoxyphenyl)-7-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}chromen-4-one

Description

Calycosin 7-galactoside belongs to the class of organic compounds known as isoflavonoid o-glycosides. These are o-glycosylated derivatives of isoflavonoids, which are natural products derived from 3-phenylchromen-4-one. Calycosin 7-galactoside is an extremely weak basic (essentially neutral) compound (based on its pKa). Outside of the human body, Calycosin 7-galactoside has been detected, but not quantified in, a few different foods, such as herbs and spices, pulses, and tea. 3-(3-hydroxy-4-methoxyphenyl)-7-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}chromen-4-one is found in Amorpha fruticosa, Astragalus membranaceus, Astragalus mongholicus, Glycyrrhiza glabra, Glycyrrhiza pallidiflora, Maackia amurensis, Styphnolobium japonicum and Trifolium pratense. This could make calycosin 7-galactoside a potential biomarker for the consumption of these foods.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv0541 02241209032D          

 32 35  0  0  0  0            999 V2000
   -0.5500    0.4463    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3067    0.0341    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9946    0.4463    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7513    0.0341    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7513   -0.8598    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3067   -0.8598    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9946   -1.2726    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9946   -2.0976    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3067   -2.5793    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5500   -2.0976    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5500   -1.2726    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5500    2.9916    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3067    2.5788    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3067    1.6848    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9946    1.2719    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7513    1.6848    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7513    2.5788    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9946    2.9916    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9946    3.8171    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5818    4.5739    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3067   -3.4049    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7561   -3.4049    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0317   -3.9550    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7195   -3.9550    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0635   -4.5739    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7513   -4.5739    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7561   -2.2355    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0317   -2.7854    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7195   -2.7854    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0635   -3.4049    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7513   -3.4049    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0635   -2.2355    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  2  6  1  0  0  0  0
  3  4  2  0  0  0  0
  3 15  1  0  0  0  0
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  9 10  2  0  0  0  0
  9 21  1  0  0  0  0
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 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 13 18  1  0  0  0  0
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 15 16  2  0  0  0  0
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 17 18  2  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 22 28  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 24 30  1  0  0  0  0
 25 26  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 29 32  1  0  0  0  0
 30 31  1  0  0  0  0
M  END

     RDKit          3D

 54 57  0  0  0  0  0  0  0  0999 V2000
    9.6368    2.2062   -0.9714 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.4025    1.8965   -0.7844 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.1482    1.6430   -0.6379 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1551    2.4498   -1.2362 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -2.9414   -0.6273    1.5161 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9669   -0.6253    0.5850 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.5036   -1.9053    0.3281 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3504   -1.7443   -0.7510 C   0  0  1  0  0  0  0  0  0  0  0  0
   -5.4904   -3.0026   -1.5744 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2996   -3.4389   -2.0960 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6796   -1.2553   -0.2243 C   0  0  2  0  0  0  0  0  0  0  0  0
   -7.4245   -0.7261   -1.2761 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4321   -0.2625    0.8603 C   0  0  1  0  0  0  0  0  0  0  0  0
   -6.7783   -0.7983    2.1211 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0807    0.3628    0.8769 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.9771    1.5028    0.0766 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7851   -0.4202    2.4637 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5751   -0.1537    2.3781 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1297    0.1878    1.1689 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5077    0.4582    1.0739 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2469    0.3955    2.0748 O   0  0  0  0  0  0  0  0  0  0  0  0
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    7.7055   -0.2751    0.7370 O   0  0  0  0  0  0  0  0  0  0  0  0
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   10.3733    2.0665   -0.1182 H   0  0  0  0  0  0  0  0  0  0  0  0
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    4.0652    2.7705   -1.5200 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5438    1.1082   -2.1833 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6032    0.0674   -0.7466 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5487   -0.3184   -0.3970 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9212   -0.9715   -1.4520 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1899   -2.8575   -2.4203 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9602   -3.7615   -0.9156 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2781   -4.4060   -2.1840 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2100   -2.1676    0.1677 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9043   -1.4575   -1.7353 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1779    0.5725    0.7086 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4262   -0.2453    2.8527 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8961    0.7261    1.9288 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9996    1.6686   -0.0928 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1558   -0.6828    3.4439 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2060   -0.2114    3.2549 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0615   -0.5442    0.8540 H   0  0  0  0  0  0  0  0  0  0  0  0
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  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
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  6 30  1  0
 30 31  2  0
 31 32  1  0
  6  7  1  0
  7  8  2  0
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 19 20  1  0
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 23 24  1  0
 12 25  2  0
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 28 29  2  0
 31  3  1  0
 28  7  1  0
 27 10  1  0
 23 14  1  0
  1 33  1  0
  1 34  1  0
  1 35  1  0
  4 36  1  0
  5 37  1  0
 30 53  1  0
 32 54  1  0
  8 38  1  0
 11 39  1  0
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 17 42  1  0
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 19 45  1  1
 20 46  1  0
 21 47  1  6
 22 48  1  0
 23 49  1  1
 24 50  1  0
 25 51  1  0
 26 52  1  0
M  END


  Mrv0541 02241209032D          

 32 35  0  0  0  0            999 V2000
   -0.5500    0.4463    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3067    0.0341    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9946    0.4463    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7513    0.0341    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7513   -0.8598    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3067   -0.8598    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9946   -1.2726    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9946   -2.0976    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3067   -2.5793    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5500   -2.0976    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5500   -1.2726    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5500    2.9916    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3067    2.5788    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3067    1.6848    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9946    1.2719    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7513    1.6848    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7513    2.5788    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.9946    3.8171    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5818    4.5739    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3067   -3.4049    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7561   -3.4049    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0317   -3.9550    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.7195   -3.9550    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    2.0635   -3.4049    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  2  6  1  0  0  0  0
  3  4  2  0  0  0  0
  3 15  1  0  0  0  0
  4  5  1  0  0  0  0
  5  7  1  0  0  0  0
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  6 11  2  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
  9 21  1  0  0  0  0
 10 11  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
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 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
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 22 28  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 24 30  1  0  0  0  0
 25 26  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 29 32  1  0  0  0  0
 30 31  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0265510

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=CC=C(C=C1O)C1=COC2=CC(OC3OC(CO)C(O)C(O)C3O)=CC=C2C1=O

> <INCHI_IDENTIFIER>
InChI=1S/C22H22O10/c1-29-15-5-2-10(6-14(15)24)13-9-30-16-7-11(3-4-12(16)18(13)25)31-22-21(28)20(27)19(26)17(8-23)32-22/h2-7,9,17,19-24,26-28H,8H2,1H3

> <INCHI_KEY>
WACBUPFEGWUGPB-UHFFFAOYSA-N

> <FORMULA>
C22H22O10

> <MOLECULAR_WEIGHT>
446.4041

> <EXACT_MASS>
446.121296924

> <JCHEM_ACCEPTOR_COUNT>
10

> <JCHEM_AVERAGE_POLARIZABILITY>
44.43114913058739

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
5

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
3-(3-hydroxy-4-methoxyphenyl)-7-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-4H-chromen-4-one

> <ALOGPS_LOGP>
0.80

> <JCHEM_LOGP>
0.30469835233333387

> <ALOGPS_LOGS>
-2.97

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
12.200536758050106

> <JCHEM_PKA_STRONGEST_ACIDIC>
9.206878162581587

> <JCHEM_PKA_STRONGEST_BASIC>
-2.981092343722586

> <JCHEM_POLAR_SURFACE_AREA>
155.14000000000001

> <JCHEM_REFRACTIVITY>
108.30959999999996

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
4.74e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
3-(3-hydroxy-4-methoxyphenyl)-7-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}chromen-4-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 24-FEB-12   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-FEB-12         0                                  
HETATM    1  O   UNK     0      -1.027   0.833   0.000  0.00  0.00           O+0
HETATM    2  C   UNK     0      -2.439   0.064   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -3.723   0.833   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -5.136   0.064   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0      -5.136  -1.605   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0      -2.439  -1.605   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      -3.723  -2.376   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -3.723  -3.916   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      -2.439  -4.815   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      -1.027  -3.916   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      -1.027  -2.376   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0      -1.027   5.584   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0      -2.439   4.814   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      -2.439   3.145   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      -3.723   2.374   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      -5.136   3.145   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      -5.136   4.814   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      -3.723   5.584   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0      -3.723   7.125   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0      -2.953   8.538   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0      -2.439  -6.356   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       1.411  -6.356   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0       1.926  -7.383   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0       3.210  -7.383   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       3.852  -8.538   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0       5.136  -8.538   0.000  0.00  0.00           O+0
HETATM   27  O   UNK     0       1.411  -4.173   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0       1.926  -5.199   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       3.210  -5.199   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       3.852  -6.356   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0       5.136  -6.356   0.000  0.00  0.00           O+0
HETATM   32  O   UNK     0       3.852  -4.173   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3    6                                                  
CONECT    3    2    4   15                                                  
CONECT    4    3    5                                                       
CONECT    5    4    7                                                       
CONECT    6    2    7   11                                                  
CONECT    7    5    6    8                                                  
CONECT    8    7    9                                                       
CONECT    9    8   10   21                                                  
CONECT   10    9   11                                                       
CONECT   11    6   10                                                       
CONECT   12   13                                                            
CONECT   13   12   14   18                                                  
CONECT   14   13   15                                                       
CONECT   15    3   14   16                                                  
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   13   17   19                                                  
CONECT   19   18   20                                                       
CONECT   20   19                                                            
CONECT   21    9   22                                                       
CONECT   22   21   23   28                                                  
CONECT   23   22   24                                                       
CONECT   24   23   25   30                                                  
CONECT   25   24   26                                                       
CONECT   26   25                                                            
CONECT   27   28                                                            
CONECT   28   22   27   29                                                  
CONECT   29   28   30   32                                                  
CONECT   30   24   29   31                                                  
CONECT   31   30                                                            
CONECT   32   29                                                            
MASTER        0    0    0    0    0    0    0    0   32    0   70    0
END

View in JSmol

Synonyms

Value	Source
Calycosin 7-O-galactoside	HMDB

Chemical Formula

C₂₂H₂₂O₁₀

Average Mass

446.4041 Da

Monoisotopic Mass

446.12130 Da

IUPAC Name

3-(3-hydroxy-4-methoxyphenyl)-7-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-4H-chromen-4-one

Traditional Name

3-(3-hydroxy-4-methoxyphenyl)-7-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}chromen-4-one

CAS Registry Number

Not Available

SMILES

COC1=CC=C(C=C1O)C1=COC2=CC(OC3OC(CO)C(O)C(O)C3O)=CC=C2C1=O

InChI Identifier

InChI=1S/C22H22O10/c1-29-15-5-2-10(6-14(15)24)13-9-30-16-7-11(3-4-12(16)18(13)25)31-22-21(28)20(27)19(26)17(8-23)32-22/h2-7,9,17,19-24,26-28H,8H2,1H3

InChI Key

WACBUPFEGWUGPB-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Amorpha fruticosa	LOTUS Database	35616633
Astragalus membranaceus	LOTUS Database	35616633
Astragalus mongholicus	LOTUS Database	35616633
Glycyrrhiza glabra	LOTUS Database	35616633
Glycyrrhiza pallidiflora	LOTUS Database	35616633
Maackia amurensis	LOTUS Database	35616633
Styphnolobium japonicum	LOTUS Database	35616633
Trifolium pratense	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as isoflavonoid o-glycosides. These are o-glycosylated derivatives of isoflavonoids, which are natural products derived from 3-phenylchromen-4-one.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Isoflavonoids

Sub Class

Isoflavonoid O-glycosides

Direct Parent

Isoflavonoid O-glycosides

Alternative Parents

Substituents

Isoflavonoid o-glycoside
Isoflavonoid-7-o-glycoside
4p-o-methylisoflavone
3'-hydroxy,4'-methoxyisoflavonoid
Hydroxyisoflavonoid
Isoflavone
Phenolic glycoside
Hexose monosaccharide
Chromone
Glycosyl compound
O-glycosyl compound
Benzopyran
Methoxyphenol
1-benzopyran
Phenoxy compound
Anisole
Methoxybenzene
Phenol ether
1-hydroxy-4-unsubstituted benzenoid
1-hydroxy-2-unsubstituted benzenoid
Phenol
Alkyl aryl ether
Pyranone
Benzenoid
Monocyclic benzene moiety
Oxane
Pyran
Monosaccharide
Heteroaromatic compound
Secondary alcohol
Ether
Oxacycle
Polyol
Acetal
Organoheterocyclic compound
Primary alcohol
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Alcohol
Organooxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	0.8	ALOGPS
logP	0.3	ChemAxon
logS	-3	ALOGPS
pKa (Strongest Acidic)	9.21	ChemAxon
pKa (Strongest Basic)	-3	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	10	ChemAxon
Hydrogen Donor Count	5	ChemAxon
Polar Surface Area	155.14 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	108.31 m³·mol⁻¹	ChemAxon
Polarizability	44.43 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

HMDB0038821

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

FDB018248

KNApSAcK ID

C00010160

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

91973796

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 3-(3-hydroxy-4-methoxyphenyl)-7-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}chromen-4-one (NP0265510)

MOL for NP0265510 (3-(3-hydroxy-4-methoxyphenyl)-7-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}chromen-4-one)

3D MOL for NP0265510 (3-(3-hydroxy-4-methoxyphenyl)-7-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}chromen-4-one)

3D SDF for NP0265510 (3-(3-hydroxy-4-methoxyphenyl)-7-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}chromen-4-one)

3D-SDF for NP0265510 (3-(3-hydroxy-4-methoxyphenyl)-7-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}chromen-4-one)

PDB for NP0265510 (3-(3-hydroxy-4-methoxyphenyl)-7-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}chromen-4-one)

3D PDB for NP0265510 (3-(3-hydroxy-4-methoxyphenyl)-7-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}chromen-4-one)

SMILES for NP0265510 (3-(3-hydroxy-4-methoxyphenyl)-7-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}chromen-4-one)

INCHI for NP0265510 (3-(3-hydroxy-4-methoxyphenyl)-7-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}chromen-4-one)

Structure for NP0265510 (3-(3-hydroxy-4-methoxyphenyl)-7-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}chromen-4-one)

3D Structure for NP0265510 (3-(3-hydroxy-4-methoxyphenyl)-7-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}chromen-4-one)