NP-MRD: Showing NP-Card for 4-[(1e,5e,7e,11r)-11-methoxytetradeca-1,5,7,13-tetraen-1-yl]-2-[(1r,2s)-2-methylcyclopropyl]-4,5-dihydro-1,3-thiazole (NP0264406)

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Record Information

Version

2.0

Created at

2022-09-08 07:55:29 UTC

Updated at

2022-09-08 07:55:29 UTC

NP-MRD ID

NP0264406

Secondary Accession Numbers

None

Natural Product Identification

Common Name

4-[(1e,5e,7e,11r)-11-methoxytetradeca-1,5,7,13-tetraen-1-yl]-2-[(1r,2s)-2-methylcyclopropyl]-4,5-dihydro-1,3-thiazole

Description

Curacin D belongs to the class of organic compounds known as imidothiolactones. These are analogs of imidolactones where the oxygen atom is replaced by a sulfur atom. They have the general structure RC(=N)SR' where the central carbon atom is part of a ring. R,R' = organyl group. 4-[(1e,5e,7e,11r)-11-methoxytetradeca-1,5,7,13-tetraen-1-yl]-2-[(1r,2s)-2-methylcyclopropyl]-4,5-dihydro-1,3-thiazole is found in Lyngbya sordida and Symploca hydnoides. 4-[(1e,5e,7e,11r)-11-methoxytetradeca-1,5,7,13-tetraen-1-yl]-2-[(1r,2s)-2-methylcyclopropyl]-4,5-dihydro-1,3-thiazole was first documented in 2008 (PMID: 18393465). Based on a literature review a small amount of articles have been published on Curacin D (PMID: 19839606) (PMID: 26980238) (PMID: 28420100) (PMID: 19270119).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309082209552D          

 25 26  0  0  1  0            999 V2000
   -1.4575   -9.0134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7430   -9.4259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0285   -9.0134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6859   -9.4259    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4004   -9.0134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1149   -9.4259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8294   -9.0134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5438   -9.4259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2583   -9.0134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9728   -9.4259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6872   -9.0134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4017   -9.4259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1162   -9.0134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8306   -9.4259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5451   -9.0134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.6314   -8.1929    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.4383   -8.0213    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    9.8508   -8.7358    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.6713   -8.8221    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   11.4250   -8.4865    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.3387   -9.3070    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   11.6743  -10.0607    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2988   -9.3489    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.6859  -10.2509    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4004  -10.6634    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 19 18  1  6  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 19 21  1  0  0  0  0
 21 22  1  6  0  0  0
 18 23  2  0  0  0  0
 15 23  1  0  0  0  0
  4 24  1  1  0  0  0
 24 25  1  0  0  0  0
M  END

     RDKit          3D

 58 59  0  0  0  0  0  0  0  0999 V2000
   -5.6782    1.0026    4.6182 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1038    0.7524    3.4654 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4487   -0.5524    3.2258 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0668   -1.2519    2.0391 C   0  0  1  0  0  0  0  0  0  0  0  0
   -4.2935   -2.4791    1.7033 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8347   -2.2923    1.4903 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4513   -1.3781    0.4131 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7304   -0.3077    0.6538 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3130    0.6484   -0.3810 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5850    1.7105   -0.0785 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1280    2.7147   -1.0711 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4073    2.7814   -1.0911 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9401    1.4388   -1.4664 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6966    1.2115   -2.5319 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1392   -0.2002   -2.7502 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.2901   -0.3708   -4.2385 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1282   -0.4135   -4.3278 S   0  0  0  0  0  0  0  0  0  0  0  0
    5.3657   -0.7282   -2.5880 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6427   -1.1149   -1.9558 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.6182   -1.3048   -0.4409 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4373   -0.2046   -1.1306 C   0  0  2  0  0  0  0  0  0  0  0  0
    6.9996    1.1882   -0.7809 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2631   -0.5612   -2.0399 N   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4206   -1.4919    2.2259 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.2131   -0.7870    1.3293 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1530    1.9453    4.7941 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6755    0.2594    5.3980 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1073    1.4935    2.6934 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3829   -0.3440    3.0246 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4552   -1.1993    4.1354 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9958   -0.5193    1.1816 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8047   -3.0074    0.8720 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3989   -3.1821    2.5804 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3650   -2.0189    2.4693 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4121   -3.3135    1.2700 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7593   -1.5751   -0.5951 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4117   -0.1007    1.6863 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6054    0.4795   -1.4024 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2981    1.8683    0.9514 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4888    2.4858   -2.0770 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4630    3.7266   -0.7750 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6584    3.5233   -1.8645 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7702    3.0569   -0.0849 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6647    0.6121   -0.7926 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9436    2.0417   -3.1657 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3122   -0.9031   -2.4575 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8588   -1.3137   -4.5983 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.9238    0.5157   -4.8179 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2351   -1.9470   -2.4442 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6613   -0.9834    0.0590 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1535   -2.1287    0.0287 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.5471   -0.3368   -1.0883 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.2458    1.8597   -1.6279 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.6489    1.5282    0.0738 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9328    1.2622   -0.5139 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0725    0.3076    1.4088 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0877   -1.1304    0.2865 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.2808   -0.9724    1.5940 H   0  0  0  0  0  0  0  0  0  0  0  0
 25 24  1  0
 24  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  2  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 23  2  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
  4  3  1  0
  3  2  1  0
  2  1  2  3
 23 15  1  0
 21 19  1  0
 25 56  1  0
 25 57  1  0
 25 58  1  0
  4 31  1  6
  5 32  1  0
  5 33  1  0
  6 34  1  0
  6 35  1  0
  7 36  1  0
  8 37  1  0
  9 38  1  0
 10 39  1  0
 11 40  1  0
 11 41  1  0
 12 42  1  0
 12 43  1  0
 13 44  1  0
 14 45  1  0
 15 46  1  1
 16 47  1  0
 16 48  1  0
 19 49  1  6
 20 50  1  0
 20 51  1  0
 21 52  1  6
 22 53  1  0
 22 54  1  0
 22 55  1  0
  3 29  1  0
  3 30  1  0
  2 28  1  0
  1 26  1  0
  1 27  1  0
M  END


  Mrv1652309082209552D          

 25 26  0  0  1  0            999 V2000
   -1.4575   -9.0134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7430   -9.4259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0285   -9.0134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6859   -9.4259    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.4004   -9.0134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1149   -9.4259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8294   -9.0134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5438   -9.4259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2583   -9.0134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9728   -9.4259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6872   -9.0134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4017   -9.4259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1162   -9.0134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8306   -9.4259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5451   -9.0134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.6314   -8.1929    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.4383   -8.0213    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    9.8508   -8.7358    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.6713   -8.8221    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   11.4250   -8.4865    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.3387   -9.3070    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   11.6743  -10.0607    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2988   -9.3489    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.6859  -10.2509    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4004  -10.6634    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 17 18  1  0  0  0  0
 19 18  1  6  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 19 21  1  0  0  0  0
 21 22  1  6  0  0  0
 18 23  2  0  0  0  0
 15 23  1  0  0  0  0
  4 24  1  1  0  0  0
 24 25  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0264406

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CO[C@H](CC\C=C\C=C\CC\C=C\C1CSC(=N1)[C@@H]1C[C@@H]1C)CC=C

> <INCHI_IDENTIFIER>
InChI=1S/C22H33NOS/c1-4-13-20(24-3)15-12-10-8-6-5-7-9-11-14-19-17-25-22(23-19)21-16-18(21)2/h4-6,8,10-11,14,18-21H,1,7,9,12-13,15-17H2,2-3H3/b6-5+,10-8+,14-11+/t18-,19?,20-,21+/m0/s1

> <INCHI_KEY>
SSJXRCYFOOLEKV-JNTJKXLSSA-N

> <FORMULA>
C22H33NOS

> <MOLECULAR_WEIGHT>
359.57

> <EXACT_MASS>
359.228285861

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
58

> <JCHEM_AVERAGE_POLARIZABILITY>
44.38107033798343

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
4-[(1E,5E,7E,11R)-11-methoxytetradeca-1,5,7,13-tetraen-1-yl]-2-[(1R,2S)-2-methylcyclopropyl]-4,5-dihydro-1,3-thiazole

> <JCHEM_LOGP>
5.845604259

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
4.498593908107549

> <JCHEM_POLAR_SURFACE_AREA>
21.59

> <JCHEM_REFRACTIVITY>
114.65969999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
12

> <JCHEM_RULE_OF_FIVE>
0

> <JCHEM_TRADITIONAL_IUPAC>
4-[(1E,5E,7E,11R)-11-methoxytetradeca-1,5,7,13-tetraen-1-yl]-2-[(1R,2S)-2-methylcyclopropyl]-4,5-dihydro-1,3-thiazole

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 08-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   08-SEP-22         0                                  
HETATM    1  C   UNK     0      -2.721 -16.825   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -1.387 -17.595   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -0.053 -16.825   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       1.280 -17.595   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       2.614 -16.825   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       3.948 -17.595   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       5.281 -16.825   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       6.615 -17.595   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       7.949 -16.825   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       9.282 -17.595   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      10.616 -16.825   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      11.950 -17.595   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      13.284 -16.825   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      14.617 -17.595   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      15.951 -16.825   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      16.112 -15.293   0.000  0.00  0.00           C+0
HETATM   17  S   UNK     0      17.618 -14.973   0.000  0.00  0.00           S+0
HETATM   18  C   UNK     0      18.388 -16.307   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      19.920 -16.468   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      21.327 -15.841   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      21.166 -17.373   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      21.792 -18.780   0.000  0.00  0.00           C+0
HETATM   23  N   UNK     0      17.358 -17.451   0.000  0.00  0.00           N+0
HETATM   24  O   UNK     0       1.280 -19.135   0.000  0.00  0.00           O+0
HETATM   25  C   UNK     0       2.614 -19.905   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5   24                                                  
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16   23                                                  
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19   23                                                  
CONECT   19   18   20   21                                                  
CONECT   20   19   21                                                       
CONECT   21   20   19   22                                                  
CONECT   22   21                                                            
CONECT   23   18   15                                                       
CONECT   24    4   25                                                       
CONECT   25   24                                                            
MASTER        0    0    0    0    0    0    0    0   25    0   52    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₂H₃₃NOS

Average Mass

359.5700 Da

Monoisotopic Mass

359.22829 Da

IUPAC Name

4-[(1E,5E,7E,11R)-11-methoxytetradeca-1,5,7,13-tetraen-1-yl]-2-[(1R,2S)-2-methylcyclopropyl]-4,5-dihydro-1,3-thiazole

Traditional Name

4-[(1E,5E,7E,11R)-11-methoxytetradeca-1,5,7,13-tetraen-1-yl]-2-[(1R,2S)-2-methylcyclopropyl]-4,5-dihydro-1,3-thiazole

CAS Registry Number

Not Available

SMILES

CO[C@H](CC\C=C\C=C\CC\C=C\C1CSC(=N1)[C@@H]1C[C@@H]1C)CC=C

InChI Identifier

InChI=1S/C22H33NOS/c1-4-13-20(24-3)15-12-10-8-6-5-7-9-11-14-19-17-25-22(23-19)21-16-18(21)2/h4-6,8,10-11,14,18-21H,1,7,9,12-13,15-17H2,2-3H3/b6-5+,10-8+,14-11+/t18-,19?,20-,21+/m0/s1

InChI Key

SSJXRCYFOOLEKV-JNTJKXLSSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Lyngbya sordida	LOTUS Database	35616633
Symploca hydnoides	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as imidothiolactones. These are analogs of imidolactones where the oxygen atom is replaced by a sulfur atom. They have the general structure RC(=N)SR' where the central carbon atom is part of a ring. R,R' = organyl group.

Kingdom

Organic compounds

Super Class

Organosulfur compounds

Class

Imidothioesters

Sub Class

Imidothiolactones

Direct Parent

Imidothiolactones

Alternative Parents

Substituents

Imidothiolactone
Meta-thiazoline
Azacycle
Organoheterocyclic compound
Organic 1,3-dipolar compound
Propargyl-type 1,3-dipolar organic compound
Ether
Dialkyl ether
Organic nitrogen compound
Organic oxygen compound
Organopnictogen compound
Hydrocarbon derivative
Organooxygen compound
Organonitrogen compound
Aliphatic heteromonocyclic compound

Molecular Framework

Aliphatic heteromonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	5.85	ChemAxon
pKa (Strongest Basic)	4.5	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	2	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	21.59 Å²	ChemAxon
Rotatable Bond Count	12	ChemAxon
Refractivity	114.66 m³·mol⁻¹	ChemAxon
Polarizability	44.38 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00028110

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

100955730

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Gunasekera SP, Ross C, Paul VJ, Matthew S, Luesch H: Dragonamides C and D, linear lipopeptides from the marine cyanobacterium brown Lyngbya polychroa. J Nat Prod. 2008 May;71(5):887-90. doi: 10.1021/np0706769. Epub 2008 Apr 5. [PubMed:18393465 ]
Taniguchi M, Nunnery JK, Engene N, Esquenazi E, Byrum T, Dorrestein PC, Gerwick WH: Palmyramide A, a cyclic depsipeptide from a Palmyra Atoll collection of the marine cyanobacterium Lyngbya majuscula. J Nat Prod. 2010 Mar 26;73(3):393-8. doi: 10.1021/np900428h. [PubMed:19839606 ]
Lopez JA, Al-Lihaibi SS, Alarif WM, Abdel-Lateff A, Nogata Y, Washio K, Morikawa M, Okino T: Wewakazole B, a Cytotoxic Cyanobactin from the Cyanobacterium Moorea producens Collected in the Red Sea. J Nat Prod. 2016 Apr 22;79(4):1213-8. doi: 10.1021/acs.jnatprod.6b00051. Epub 2016 Mar 16. [PubMed:26980238 ]
Zhang C, Naman CB, Engene N, Gerwick WH: Laucysteinamide A, a Hybrid PKS/NRPS Metabolite from a Saipan Cyanobacterium, cf. Caldora penicillata. Mar Drugs. 2017 Apr 14;15(4). pii: md15040121. doi: 10.3390/md15040121. [PubMed:28420100 ]
Sharp K, Arthur KE, Gu L, Ross C, Harrison G, Gunasekera SP, Meickle T, Matthew S, Luesch H, Thacker RW, Sherman DH, Paul VJ: Phylogenetic and chemical diversity of three chemotypes of bloom-forming lyngbya species (Cyanobacteria: Oscillatoriales) from reefs of southeastern Florida. Appl Environ Microbiol. 2009 May;75(9):2879-88. doi: 10.1128/AEM.02656-08. Epub 2009 Mar 6. [PubMed:19270119 ]
LOTUS database [Link]

Showing NP-Card for 4-[(1e,5e,7e,11r)-11-methoxytetradeca-1,5,7,13-tetraen-1-yl]-2-[(1r,2s)-2-methylcyclopropyl]-4,5-dihydro-1,3-thiazole (NP0264406)

MOL for NP0264406 (4-[(1e,5e,7e,11r)-11-methoxytetradeca-1,5,7,13-tetraen-1-yl]-2-[(1r,2s)-2-methylcyclopropyl]-4,5-dihydro-1,3-thiazole)

3D MOL for NP0264406 (4-[(1e,5e,7e,11r)-11-methoxytetradeca-1,5,7,13-tetraen-1-yl]-2-[(1r,2s)-2-methylcyclopropyl]-4,5-dihydro-1,3-thiazole)

3D SDF for NP0264406 (4-[(1e,5e,7e,11r)-11-methoxytetradeca-1,5,7,13-tetraen-1-yl]-2-[(1r,2s)-2-methylcyclopropyl]-4,5-dihydro-1,3-thiazole)

3D-SDF for NP0264406 (4-[(1e,5e,7e,11r)-11-methoxytetradeca-1,5,7,13-tetraen-1-yl]-2-[(1r,2s)-2-methylcyclopropyl]-4,5-dihydro-1,3-thiazole)

PDB for NP0264406 (4-[(1e,5e,7e,11r)-11-methoxytetradeca-1,5,7,13-tetraen-1-yl]-2-[(1r,2s)-2-methylcyclopropyl]-4,5-dihydro-1,3-thiazole)

3D PDB for NP0264406 (4-[(1e,5e,7e,11r)-11-methoxytetradeca-1,5,7,13-tetraen-1-yl]-2-[(1r,2s)-2-methylcyclopropyl]-4,5-dihydro-1,3-thiazole)

SMILES for NP0264406 (4-[(1e,5e,7e,11r)-11-methoxytetradeca-1,5,7,13-tetraen-1-yl]-2-[(1r,2s)-2-methylcyclopropyl]-4,5-dihydro-1,3-thiazole)

INCHI for NP0264406 (4-[(1e,5e,7e,11r)-11-methoxytetradeca-1,5,7,13-tetraen-1-yl]-2-[(1r,2s)-2-methylcyclopropyl]-4,5-dihydro-1,3-thiazole)

Structure for NP0264406 (4-[(1e,5e,7e,11r)-11-methoxytetradeca-1,5,7,13-tetraen-1-yl]-2-[(1r,2s)-2-methylcyclopropyl]-4,5-dihydro-1,3-thiazole)

3D Structure for NP0264406 (4-[(1e,5e,7e,11r)-11-methoxytetradeca-1,5,7,13-tetraen-1-yl]-2-[(1r,2s)-2-methylcyclopropyl]-4,5-dihydro-1,3-thiazole)