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Record Information
Version2.0
Created at2022-09-08 02:44:37 UTC
Updated at2022-09-08 02:44:37 UTC
NP-MRD IDNP0260545
Secondary Accession NumbersNone
Natural Product Identification
Common Name(1s,2e,4s,15e,19r,20s,23s,25s,28r,30r,32r,33s)-11,19,32-trihydroxy-23-methoxy-2-methyl-6,17,21,34-tetraoxa-12-azahexacyclo[28.3.1.0¹,²⁵.0⁴,²⁰.0¹⁰,¹⁴.0²⁸,³³]tetratriaconta-2,10(14),11,15,26-pentaene-7,13,22-trione
DescriptionStreptoseomycin belongs to the class of organic compounds known as macrolactams. These are cyclic amides of amino carboxylic acids, having a 1-azacycloalkan-2-one structure, or analogues having unsaturation or heteroatoms replacing one or more carbon atoms of the ring. They are nitrogen analogues (the a nitrogen atom replacing the o atom of the cyclic carboxylic acid group ) of the naturally occurring macrolides. (1s,2e,4s,15e,19r,20s,23s,25s,28r,30r,32r,33s)-11,19,32-trihydroxy-23-methoxy-2-methyl-6,17,21,34-tetraoxa-12-azahexacyclo[28.3.1.0¹,²⁵.0⁴,²⁰.0¹⁰,¹⁴.0²⁸,³³]tetratriaconta-2,10(14),11,15,26-pentaene-7,13,22-trione is found in Streptomyces seoulensis. (1s,2e,4s,15e,19r,20s,23s,25s,28r,30r,32r,33s)-11,19,32-trihydroxy-23-methoxy-2-methyl-6,17,21,34-tetraoxa-12-azahexacyclo[28.3.1.0¹,²⁵.0⁴,²⁰.0¹⁰,¹⁴.0²⁸,³³]tetratriaconta-2,10(14),11,15,26-pentaene-7,13,22-trione was first documented in 2018 (PMID: 29697266). Based on a literature review a small amount of articles have been published on Streptoseomycin (PMID: 33828077) (PMID: 31789016) (PMID: 30867595).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC31H37NO11
Average Mass599.6330 Da
Monoisotopic Mass599.23666 Da
IUPAC Name(1S,2E,4S,15E,19R,20S,23S,25S,28R,30R,32R,33S)-11,19,32-trihydroxy-23-methoxy-2-methyl-6,17,21,34-tetraoxa-12-azahexacyclo[28.3.1.0^{1,25}.0^{4,20}.0^{10,14}.0^{28,33}]tetratriaconta-2,10(14),11,15,26-pentaene-7,13,22-trione
Traditional Name(1S,2E,4S,15E,19R,20S,23S,25S,28R,30R,32R,33S)-11,19,32-trihydroxy-23-methoxy-2-methyl-6,17,21,34-tetraoxa-12-azahexacyclo[28.3.1.0^{1,25}.0^{4,20}.0^{10,14}.0^{28,33}]tetratriaconta-2,10(14),11,15,26-pentaene-7,13,22-trione
CAS Registry NumberNot Available
SMILES
CO[C@H]1C[C@H]2C=C[C@H]3C[C@@H]4C[C@@H](O)[C@H]3[C@]2(O4)\C(C)=C\[C@H]2COC(=O)CCC3=C(\C=C\OC[C@@H](O)[C@H]2OC1=O)C(=O)N=C3O
InChI Identifier
InChI=1S/C31H37NO11/c1-15-9-17-13-41-25(35)6-5-20-21(29(37)32-28(20)36)7-8-40-14-23(34)27(17)42-30(38)24(39-2)11-18-4-3-16-10-19-12-22(33)26(16)31(15,18)43-19/h3-4,7-9,16-19,22-24,26-27,33-34H,5-6,10-14H2,1-2H3,(H,32,36,37)/b8-7+,15-9+/t16-,17-,18+,19+,22+,23+,24-,26-,27-,31-/m0/s1
InChI KeyWDIQWUUGAGPORQ-XEJZVVRLSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Streptomyces seoulensisLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as macrolactams. These are cyclic amides of amino carboxylic acids, having a 1-azacycloalkan-2-one structure, or analogues having unsaturation or heteroatoms replacing one or more carbon atoms of the ring. They are nitrogen analogues (the a nitrogen atom replacing the o atom of the cyclic carboxylic acid group ) of the naturally occurring macrolides.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassMacrolactams
Sub ClassNot Available
Direct ParentMacrolactams
Alternative Parents
Substituents
  • Macrolactam
  • Oxane
  • Dicarboxylic acid or derivatives
  • Cyclic alcohol
  • N-acylimine
  • Secondary alcohol
  • Lactone
  • Carboxylic acid ester
  • Oxacycle
  • Azacycle
  • Organoheterocyclic compound
  • Organic 1,3-dipolar compound
  • Propargyl-type 1,3-dipolar organic compound
  • Polyol
  • Ether
  • Dialkyl ether
  • Carboxylic acid derivative
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organonitrogen compound
  • Carbonyl group
  • Alcohol
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP-0.34ChemAxon
pKa (Strongest Acidic)4.97ChemAxon
pKa (Strongest Basic)-2.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count10ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area170.41 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity151.23 m³·mol⁻¹ChemAxon
Polarizability58.99 ųChemAxon
Number of Rings6ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID65323265
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound138963718
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Zhang B, Wang KB, Wang W, Bi SF, Mei YN, Deng XZ, Jiao RH, Tan RX, Ge HM: Discovery, Biosynthesis, and Heterologous Production of Streptoseomycin, an Anti-Microaerophilic Bacteria Macrodilactone. Org Lett. 2018 May 18;20(10):2967-2971. doi: 10.1021/acs.orglett.8b01006. Epub 2018 Apr 26. [PubMed:29697266 ]
  2. Wang KB, Wang W, Zhang B, Wang X, Chen Y, Zhu HJ, Liang Y, Tan RX, Ge HM: A [6+4]-cycloaddition adduct is the biosynthetic intermediate in streptoseomycin biosynthesis. Nat Commun. 2021 Apr 7;12(1):2092. doi: 10.1038/s41467-021-22395-7. [PubMed:33828077 ]
  3. McLeod D, Thogersen MK, Jessen NI, Jorgensen KA, Jamieson CS, Xue XS, Houk KN, Liu F, Hoffmann R: Expanding the Frontiers of Higher-Order Cycloadditions. Acc Chem Res. 2019 Dec 17;52(12):3488-3501. doi: 10.1021/acs.accounts.9b00498. Epub 2019 Dec 2. [PubMed:31789016 ]
  4. Zhang B, Wang KB, Wang W, Wang X, Liu F, Zhu J, Shi J, Li LY, Han H, Xu K, Qiao HY, Zhang X, Jiao RH, Houk KN, Liang Y, Tan RX, Ge HM: Enzyme-catalysed [6+4] cycloadditions in the biosynthesis of natural products. Nature. 2019 Apr;568(7750):122-126. doi: 10.1038/s41586-019-1021-x. Epub 2019 Mar 13. [PubMed:30867595 ]
  5. LOTUS database [Link]