NP-MRD: Showing NP-Card for 6-[1-({2,2-dimethyl-8-oxopyrano[3,2-g]chromen-10-yl}oxy)-2-hydroxy-3-methylbut-3-en-1-yl]-8-hydroxy-7-methoxychromen-2-one (NP0259384)

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Record Information

Version

2.0

Created at

2022-09-08 01:14:16 UTC

Updated at

2022-09-08 01:14:16 UTC

NP-MRD ID

NP0259384

Secondary Accession Numbers

None

Natural Product Identification

Common Name

6-[1-({2,2-dimethyl-8-oxopyrano[3,2-g]chromen-10-yl}oxy)-2-hydroxy-3-methylbut-3-en-1-yl]-8-hydroxy-7-methoxychromen-2-one

Description

6-[1-({2,2-Dimethyl-8-oxo-2H,8H-pyrano[3,2-g]chromen-10-yl}oxy)-2-hydroxy-3-methylbut-3-en-1-yl]-8-hydroxy-7-methoxy-2H-chromen-2-one belongs to the class of organic compounds known as linear pyranocoumarins. These are organic compounds containing a pyran (or a hydrogenated derivative) linearly fused to a coumarin moiety. 6-[1-({2,2-dimethyl-8-oxopyrano[3,2-g]chromen-10-yl}oxy)-2-hydroxy-3-methylbut-3-en-1-yl]-8-hydroxy-7-methoxychromen-2-one is found in Fatoua pilosa. 6-[1-({2,2-Dimethyl-8-oxo-2H,8H-pyrano[3,2-g]chromen-10-yl}oxy)-2-hydroxy-3-methylbut-3-en-1-yl]-8-hydroxy-7-methoxy-2H-chromen-2-one is an extremely weak basic (essentially neutral) compound (based on its pKa).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1533004171505512D          

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M  END

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  Mrv1533004171505512D          

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 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 29 31  1  0  0  0  0
 29 32  1  0  0  0  0
 32 33  1  0  0  0  0
 17 33  1  0  0  0  0
 26 33  2  0  0  0  0
 15 34  1  0  0  0  0
 34 35  1  0  0  0  0
 34 36  1  0  0  0  0
 36 37  2  0  0  0  0
 36 38  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0259384

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=C(O)C2=C(C=CC(=O)O2)C=C1C(OC1=C2OC(=O)C=CC2=CC2=C1OC(C)(C)C=C2)C(O)C(C)=C

> <INCHI_IDENTIFIER>
InChI=1S/C29H26O9/c1-14(2)21(32)27(18-13-16-7-9-19(30)35-23(16)22(33)26(18)34-5)37-28-24-15(6-8-20(31)36-24)12-17-10-11-29(3,4)38-25(17)28/h6-13,21,27,32-33H,1H2,2-5H3

> <INCHI_KEY>
ZXDORTWWIIDDJA-UHFFFAOYSA-N

> <FORMULA>
C29H26O9

> <MOLECULAR_WEIGHT>
518.518

> <EXACT_MASS>
518.157682417

> <JCHEM_ACCEPTOR_COUNT>
7

> <JCHEM_ATOM_COUNT>
64

> <JCHEM_AVERAGE_POLARIZABILITY>
52.77101868447534

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
6-[1-({2,2-dimethyl-8-oxo-2H,8H-pyrano[3,2-g]chromen-10-yl}oxy)-2-hydroxy-3-methylbut-3-en-1-yl]-8-hydroxy-7-methoxy-2H-chromen-2-one

> <ALOGPS_LOGP>
3.98

> <JCHEM_LOGP>
4.653705304000001

> <ALOGPS_LOGS>
-4.85

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
13.479320623172907

> <JCHEM_PKA_STRONGEST_ACIDIC>
10.556563787984118

> <JCHEM_PKA_STRONGEST_BASIC>
-3.473667951552705

> <JCHEM_POLAR_SURFACE_AREA>
120.75

> <JCHEM_REFRACTIVITY>
140.0299

> <JCHEM_ROTATABLE_BOND_COUNT>
6

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
7.28e-03 g/l

> <JCHEM_TRADITIONAL_IUPAC>
6-[1-({2,2-dimethyl-8-oxopyrano[3,2-g]chromen-10-yl}oxy)-2-hydroxy-3-methylbut-3-en-1-yl]-8-hydroxy-7-methoxychromen-2-one

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 17-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   17-APR-15         0                                  
HETATM    1  C   UNK     0       7.011   0.111   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       6.498   1.478   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       7.014   3.210   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       8.520   2.889   0.000  0.00  0.00           C+0
HETATM    5  O   UNK     0       9.539   1.253   0.000  0.00  0.00           O+0
HETATM    6  C   UNK     0       9.551   4.034   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0      11.057   3.714   0.000  0.00  0.00           O+0
HETATM    8  C   UNK     0      12.087   4.858   0.000  0.00  0.00           C+0
HETATM    9  O   UNK     0      13.684   4.609   0.000  0.00  0.00           O+0
HETATM   10  C   UNK     0      11.611   6.323   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      10.105   6.643   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       9.075   5.499   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       7.568   5.819   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       6.538   4.674   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       5.003   5.296   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0       4.003   3.979   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0       4.001   2.310   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       5.335   1.540   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0       6.668   2.310   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0       8.002   1.540   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0       9.601   2.259   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       8.002  -0.000   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       6.668  -0.770   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       5.335   0.000   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       4.001  -0.770   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       2.667   0.000   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       0.000   0.000   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       0.000   1.540   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      -0.849   2.937   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      -1.633   1.335   0.000  0.00  0.00           C+0
HETATM   32  O   UNK     0       1.334   2.310   0.000  0.00  0.00           O+0
HETATM   33  C   UNK     0       2.667   1.540   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0       4.544   6.858   0.000  0.00  0.00           C+0
HETATM   35  O   UNK     0       5.346   8.235   0.000  0.00  0.00           O+0
HETATM   36  C   UNK     0       2.975   7.170   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0       1.531   6.534   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0       2.385   8.617   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   14                                                  
CONECT    4    3    5    6                                                  
CONECT    5    4                                                            
CONECT    6    4    7   12                                                  
CONECT    7    6    8                                                       
CONECT    8    7    9   10                                                  
CONECT    9    8                                                            
CONECT   10    8   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11    6   13                                                  
CONECT   13   12   14                                                       
CONECT   14   13    3   15                                                  
CONECT   15   14   16   34                                                  
CONECT   16   15   17                                                       
CONECT   17   16   18   33                                                  
CONECT   18   17   19   24                                                  
CONECT   19   18   20                                                       
CONECT   20   19   21   22                                                  
CONECT   21   20                                                            
CONECT   22   20   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   18   25                                                  
CONECT   25   24   26                                                       
CONECT   26   25   27   33                                                  
CONECT   27   26   28                                                       
CONECT   28   27   29                                                       
CONECT   29   28   30   31   32                                             
CONECT   30   29                                                            
CONECT   31   29                                                            
CONECT   32   29   33                                                       
CONECT   33   32   17   26                                                  
CONECT   34   15   35   36                                                  
CONECT   35   34                                                            
CONECT   36   34   37   38                                                  
CONECT   37   36                                                            
CONECT   38   36                                                            
MASTER        0    0    0    0    0    0    0    0   38    0   84    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₉H₂₆O₉

Average Mass

518.5180 Da

Monoisotopic Mass

518.15768 Da

IUPAC Name

6-[1-({2,2-dimethyl-8-oxo-2H,8H-pyrano[3,2-g]chromen-10-yl}oxy)-2-hydroxy-3-methylbut-3-en-1-yl]-8-hydroxy-7-methoxy-2H-chromen-2-one

Traditional Name

6-[1-({2,2-dimethyl-8-oxopyrano[3,2-g]chromen-10-yl}oxy)-2-hydroxy-3-methylbut-3-en-1-yl]-8-hydroxy-7-methoxychromen-2-one

CAS Registry Number

Not Available

SMILES

COC1=C(O)C2=C(C=CC(=O)O2)C=C1C(OC1=C2OC(=O)C=CC2=CC2=C1OC(C)(C)C=C2)C(O)C(C)=C

InChI Identifier

InChI=1S/C29H26O9/c1-14(2)21(32)27(18-13-16-7-9-19(30)35-23(16)22(33)26(18)34-5)37-28-24-15(6-8-20(31)36-24)12-17-10-11-29(3,4)38-25(17)28/h6-13,21,27,32-33H,1H2,2-5H3

InChI Key

ZXDORTWWIIDDJA-UHFFFAOYSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Fatoua pilosa	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as linear pyranocoumarins. These are organic compounds containing a pyran (or a hydrogenated derivative) linearly fused to a coumarin moiety.

Kingdom

Organic compounds

Super Class

Phenylpropanoids and polyketides

Class

Coumarins and derivatives

Sub Class

Pyranocoumarins

Direct Parent

Linear pyranocoumarins

Alternative Parents

Substituents

Linear pyranocoumarin
Pyranochromene
Hydroxycoumarin
2,2-dimethyl-1-benzopyran
Benzopyran
1-benzopyran
Anisole
Alkyl aryl ether
Pyranone
1-hydroxy-4-unsubstituted benzenoid
Benzenoid
Pyran
Heteroaromatic compound
Secondary alcohol
Lactone
Organoheterocyclic compound
Oxacycle
Ether
Hydrocarbon derivative
Organooxygen compound
Alcohol
Organic oxygen compound
Organic oxide
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	3.98	ALOGPS
logP	4.65	ChemAxon
logS	-4.8	ALOGPS
pKa (Strongest Acidic)	10.56	ChemAxon
pKa (Strongest Basic)	-3.5	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	7	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	120.75 Å²	ChemAxon
Rotatable Bond Count	6	ChemAxon
Refractivity	140.03 m³·mol⁻¹	ChemAxon
Polarizability	52.77 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

75298137

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for 6-[1-({2,2-dimethyl-8-oxopyrano[3,2-g]chromen-10-yl}oxy)-2-hydroxy-3-methylbut-3-en-1-yl]-8-hydroxy-7-methoxychromen-2-one (NP0259384)

MOL for NP0259384 (6-[1-({2,2-dimethyl-8-oxopyrano[3,2-g]chromen-10-yl}oxy)-2-hydroxy-3-methylbut-3-en-1-yl]-8-hydroxy-7-methoxychromen-2-one)

3D MOL for NP0259384 (6-[1-({2,2-dimethyl-8-oxopyrano[3,2-g]chromen-10-yl}oxy)-2-hydroxy-3-methylbut-3-en-1-yl]-8-hydroxy-7-methoxychromen-2-one)

3D SDF for NP0259384 (6-[1-({2,2-dimethyl-8-oxopyrano[3,2-g]chromen-10-yl}oxy)-2-hydroxy-3-methylbut-3-en-1-yl]-8-hydroxy-7-methoxychromen-2-one)

3D-SDF for NP0259384 (6-[1-({2,2-dimethyl-8-oxopyrano[3,2-g]chromen-10-yl}oxy)-2-hydroxy-3-methylbut-3-en-1-yl]-8-hydroxy-7-methoxychromen-2-one)

PDB for NP0259384 (6-[1-({2,2-dimethyl-8-oxopyrano[3,2-g]chromen-10-yl}oxy)-2-hydroxy-3-methylbut-3-en-1-yl]-8-hydroxy-7-methoxychromen-2-one)

3D PDB for NP0259384 (6-[1-({2,2-dimethyl-8-oxopyrano[3,2-g]chromen-10-yl}oxy)-2-hydroxy-3-methylbut-3-en-1-yl]-8-hydroxy-7-methoxychromen-2-one)

SMILES for NP0259384 (6-[1-({2,2-dimethyl-8-oxopyrano[3,2-g]chromen-10-yl}oxy)-2-hydroxy-3-methylbut-3-en-1-yl]-8-hydroxy-7-methoxychromen-2-one)

INCHI for NP0259384 (6-[1-({2,2-dimethyl-8-oxopyrano[3,2-g]chromen-10-yl}oxy)-2-hydroxy-3-methylbut-3-en-1-yl]-8-hydroxy-7-methoxychromen-2-one)

Structure for NP0259384 (6-[1-({2,2-dimethyl-8-oxopyrano[3,2-g]chromen-10-yl}oxy)-2-hydroxy-3-methylbut-3-en-1-yl]-8-hydroxy-7-methoxychromen-2-one)

3D Structure for NP0259384 (6-[1-({2,2-dimethyl-8-oxopyrano[3,2-g]chromen-10-yl}oxy)-2-hydroxy-3-methylbut-3-en-1-yl]-8-hydroxy-7-methoxychromen-2-one)