NP-MRD: Showing NP-Card for methyl (2s,4as,6as,7r,9r,10ar,10bs)-2-(furan-3-yl)-9-hydroxy-10b-methyl-4,6-dioxo-decahydronaphtho[2,1-c]pyran-7-carboxylate (NP0258549)

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Record Information

Version

2.0

Created at

2022-09-08 00:03:25 UTC

Updated at

2022-09-08 00:03:25 UTC

NP-MRD ID

NP0258549

Secondary Accession Numbers

None

Natural Product Identification

Common Name

methyl (2s,4as,6as,7r,9r,10ar,10bs)-2-(furan-3-yl)-9-hydroxy-10b-methyl-4,6-dioxo-decahydronaphtho[2,1-c]pyran-7-carboxylate

Description

Diosbulbin F belongs to the class of organic compounds known as diterpene lactones. These are diterpenoids containing a lactone moiety. methyl (2s,4as,6as,7r,9r,10ar,10bs)-2-(furan-3-yl)-9-hydroxy-10b-methyl-4,6-dioxo-decahydronaphtho[2,1-c]pyran-7-carboxylate is found in Dioscorea bulbifera. methyl (2s,4as,6as,7r,9r,10ar,10bs)-2-(furan-3-yl)-9-hydroxy-10b-methyl-4,6-dioxo-decahydronaphtho[2,1-c]pyran-7-carboxylate was first documented in 2010 (PMID: 20452632). Based on a literature review a small amount of articles have been published on Diosbulbin F (PMID: 28477535) (PMID: 28952257).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309082202032D          

 27 30  0  0  1  0            999 V2000
    5.2520   -1.7309    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8395   -1.0164    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0145   -1.0164    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6020   -1.7309    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6020   -0.3020    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.0145    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6020    1.1270    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.0145    1.8414    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7770    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3645    0.4125    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.7770   -0.3020    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3645   -1.0164    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7770   -1.7309    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5395   -1.0164    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1270   -0.3020    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.3020   -0.3020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1105   -1.0164    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1105    0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3020    1.1270    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.1105    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9310    1.9277    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1025    2.7346    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3881    3.1471    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2250    2.5951    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1270    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5395    0.4125    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.9520    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  5  3  1  1  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  1  0  0  0
  7  9  1  0  0  0  0
 10  9  1  6  0  0  0
 10 11  1  0  0  0  0
  5 11  1  0  0  0  0
 11 12  1  1  0  0  0
 12 13  2  0  0  0  0
 12 14  1  0  0  0  0
 15 14  1  6  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 16 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  6  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 20 24  2  0  0  0  0
 19 25  1  0  0  0  0
 25 26  1  0  0  0  0
 15 26  1  0  0  0  0
 10 26  1  0  0  0  0
 26 27  1  6  0  0  0
M  END

     RDKit          3D

 51 54  0  0  0  0  0  0  0  0999 V2000
   -3.7099   -0.9793    3.0410 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4857   -0.2055    1.8707 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4043   -0.7701    0.6034 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5362   -2.0190    0.5011 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1731    0.0154   -0.6166 C   0  0  2  0  0  0  0  0  0  0  0  0
   -3.1369   -0.8749   -1.8294 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7433   -1.0318   -2.3850 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.7507   -2.2078   -3.1542 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6934   -1.2061   -1.3180 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7551   -0.1582   -0.2450 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.8778    0.7865   -0.6007 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.8536    1.9121    0.3458 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8163    2.1884    1.0071 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6055    2.6875    0.4526 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5172    1.7567    0.7602 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8407    2.4377    0.6176 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9450    3.6782    0.5904 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9345    1.5842    0.5187 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7726    0.2906    1.0732 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.0091   -0.5261    0.8994 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7543   -0.6257   -0.2505 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8043   -1.4809    0.0329 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6929   -1.8685    1.2766 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6507   -1.3301    1.8223 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5582   -0.4220    0.5214 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5670    0.5357   -0.1080 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.1263    0.8881   -1.4825 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8568   -1.6711    3.2487 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6694   -1.5509    2.9432 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8429   -0.2883    3.8863 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9875    0.7707   -0.7951 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7793   -0.4999   -2.6616 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5283   -1.8897   -1.5531 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5282   -0.2083   -3.0862 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4802   -2.1143   -3.8314 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2810   -1.2641   -1.8213 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8719   -2.2188   -0.8667 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0089   -0.6273    0.7251 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7423    1.2050   -1.6200 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6543    3.4457    1.2570 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4054    3.1406   -0.5444 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4827    1.4158    1.8358 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6586    0.4422    2.1782 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6075   -0.1593   -1.2140 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6043   -1.8047   -0.6244 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3431   -1.4954    2.8470 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.0236   -0.8964    1.3893 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8365   -1.2489   -0.1562 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6849    1.8668   -1.4361 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8756    0.1377   -1.8189 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3265    1.0479   -2.2256 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  7  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  2  0
 12 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  2  0
 16 18  1  0
 18 19  1  0
 19 25  1  0
 25 26  1  0
 26 27  1  6
 19 20  1  0
 20 24  2  0
 24 23  1  0
 23 22  1  0
 22 21  2  0
 11  5  1  0
 26 15  1  0
 21 20  1  0
 26 10  1  0
  1 28  1  0
  1 29  1  0
  1 30  1  0
  5 31  1  6
  6 32  1  0
  6 33  1  0
  7 34  1  6
  8 35  1  0
  9 36  1  0
  9 37  1  0
 10 38  1  1
 11 39  1  6
 14 40  1  0
 14 41  1  0
 15 42  1  1
 19 43  1  1
 25 47  1  0
 25 48  1  0
 27 49  1  0
 27 50  1  0
 27 51  1  0
 24 46  1  0
 22 45  1  0
 21 44  1  0
M  END


  Mrv1652309082202032D          

 27 30  0  0  1  0            999 V2000
    5.2520   -1.7309    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8395   -1.0164    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0145   -1.0164    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6020   -1.7309    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6020   -0.3020    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.0145    0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6020    1.1270    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.0145    1.8414    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7770    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3645    0.4125    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.7770   -0.3020    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3645   -1.0164    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7770   -1.7309    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5395   -1.0164    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1270   -0.3020    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.3020   -0.3020    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1105   -1.0164    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1105    0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.3020    1.1270    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.1105    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9310    1.9277    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1025    2.7346    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3881    3.1471    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2250    2.5951    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1270    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5395    0.4125    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.9520    1.1270    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  5  3  1  1  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  1  0  0  0
  7  9  1  0  0  0  0
 10  9  1  6  0  0  0
 10 11  1  0  0  0  0
  5 11  1  0  0  0  0
 11 12  1  1  0  0  0
 12 13  2  0  0  0  0
 12 14  1  0  0  0  0
 15 14  1  6  0  0  0
 15 16  1  0  0  0  0
 16 17  2  0  0  0  0
 16 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  6  0  0  0
 20 21  1  0  0  0  0
 21 22  2  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 20 24  2  0  0  0  0
 19 25  1  0  0  0  0
 25 26  1  0  0  0  0
 15 26  1  0  0  0  0
 10 26  1  0  0  0  0
 26 27  1  6  0  0  0
M  END
> <DATABASE_ID>
NP0258549

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC(=O)[C@@H]1C[C@H](O)C[C@@H]2[C@@H]1C(=O)C[C@@H]1C(=O)O[C@@H](C[C@@]21C)C1=COC=C1

> <INCHI_IDENTIFIER>
InChI=1S/C20H24O7/c1-20-8-16(10-3-4-26-9-10)27-19(24)14(20)7-15(22)17-12(18(23)25-2)5-11(21)6-13(17)20/h3-4,9,11-14,16-17,21H,5-8H2,1-2H3/t11-,12+,13+,14+,16-,17+,20-/m0/s1

> <INCHI_KEY>
LPHWMSVPEOJPHG-WEFWDAIHSA-N

> <FORMULA>
C20H24O7

> <MOLECULAR_WEIGHT>
376.405

> <EXACT_MASS>
376.152203113

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
51

> <JCHEM_AVERAGE_POLARIZABILITY>
37.664396871339406

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
methyl (2S,4aS,6aS,7R,9R,10aR,10bS)-2-(furan-3-yl)-9-hydroxy-10b-methyl-4,6-dioxo-dodecahydro-1H-naphtho[2,1-c]pyran-7-carboxylate

> <JCHEM_LOGP>
1.1321887193333333

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
16.953185795211237

> <JCHEM_PKA_STRONGEST_ACIDIC>
15.205330356433159

> <JCHEM_PKA_STRONGEST_BASIC>
-2.702939559936687

> <JCHEM_POLAR_SURFACE_AREA>
103.04

> <JCHEM_REFRACTIVITY>
92.54610000000001

> <JCHEM_ROTATABLE_BOND_COUNT>
3

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
methyl (2S,4aS,6aS,7R,9R,10aR,10bS)-2-(furan-3-yl)-9-hydroxy-10b-methyl-4,6-dioxo-decahydronaphtho[2,1-c]pyran-7-carboxylate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 08-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   08-SEP-22         0                                  
HETATM    1  C   UNK     0       9.804  -3.231   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       9.034  -1.897   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       7.494  -1.897   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0       6.724  -3.231   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       6.724  -0.564   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       7.494   0.770   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       6.724   2.104   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       7.494   3.437   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0       5.184   2.104   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       4.414   0.770   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       5.184  -0.564   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       4.414  -1.897   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0       5.184  -3.231   0.000  0.00  0.00           O+0
HETATM   14  C   UNK     0       2.874  -1.897   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       2.104  -0.564   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       0.564  -0.564   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0      -0.206  -1.897   0.000  0.00  0.00           O+0
HETATM   18  O   UNK     0      -0.206   0.770   0.000  0.00  0.00           O+0
HETATM   19  C   UNK     0       0.564   2.104   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      -0.206   3.437   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      -1.738   3.598   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      -2.058   5.105   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0      -0.724   5.875   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0       0.420   4.844   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       2.104   2.104   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       2.874   0.770   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       3.644   2.104   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6   11                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8    9                                                  
CONECT    8    7                                                            
CONECT    9    7   10                                                       
CONECT   10    9   11   26                                                  
CONECT   11   10    5   12                                                  
CONECT   12   11   13   14                                                  
CONECT   13   12                                                            
CONECT   14   12   15                                                       
CONECT   15   14   16   26                                                  
CONECT   16   15   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16   19                                                       
CONECT   19   18   20   25                                                  
CONECT   20   19   21   24                                                  
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   20                                                       
CONECT   25   19   26                                                       
CONECT   26   25   15   10   27                                             
CONECT   27   26                                                            
MASTER        0    0    0    0    0    0    0    0   27    0   60    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₀H₂₄O₇

Average Mass

376.4050 Da

Monoisotopic Mass

376.15220 Da

IUPAC Name

methyl (2S,4aS,6aS,7R,9R,10aR,10bS)-2-(furan-3-yl)-9-hydroxy-10b-methyl-4,6-dioxo-dodecahydro-1H-naphtho[2,1-c]pyran-7-carboxylate

Traditional Name

methyl (2S,4aS,6aS,7R,9R,10aR,10bS)-2-(furan-3-yl)-9-hydroxy-10b-methyl-4,6-dioxo-decahydronaphtho[2,1-c]pyran-7-carboxylate

CAS Registry Number

Not Available

SMILES

COC(=O)[C@@H]1C[C@H](O)C[C@@H]2[C@@H]1C(=O)C[C@@H]1C(=O)O[C@@H](C[C@@]21C)C1=COC=C1

InChI Identifier

InChI=1S/C20H24O7/c1-20-8-16(10-3-4-26-9-10)27-19(24)14(20)7-15(22)17-12(18(23)25-2)5-11(21)6-13(17)20/h3-4,9,11-14,16-17,21H,5-8H2,1-2H3/t11-,12+,13+,14+,16-,17+,20-/m0/s1

InChI Key

LPHWMSVPEOJPHG-WEFWDAIHSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Dioscorea bulbifera	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as diterpene lactones. These are diterpenoids containing a lactone moiety.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Terpene lactones

Direct Parent

Diterpene lactones

Alternative Parents

Substituents

Diterpene lactone
Diterpenoid
Clerodane diterpenoid
Naphthopyran
Naphthalene
Delta valerolactone
Delta_valerolactone
Pyran
Oxane
Dicarboxylic acid or derivatives
Cyclic alcohol
Heteroaromatic compound
Methyl ester
Furan
Carboxylic acid ester
Secondary alcohol
Ketone
Lactone
Organoheterocyclic compound
Oxacycle
Carboxylic acid derivative
Organic oxide
Organic oxygen compound
Organooxygen compound
Hydrocarbon derivative
Carbonyl group
Alcohol
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.13	ChemAxon
pKa (Strongest Acidic)	15.21	ChemAxon
pKa (Strongest Basic)	-2.7	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	103.04 Å²	ChemAxon
Rotatable Bond Count	3	ChemAxon
Refractivity	92.55 m³·mol⁻¹	ChemAxon
Polarizability	37.66 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

C00033664

Chemspider ID

158172

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

181851

PDB ID

Not Available

ChEBI ID

175834

Good Scents ID

Not Available

References

General References

Liu H, Chou GX, Guo YL, Ji LL, Wang JM, Wang ZT: Norclerodane diterpenoids from rhizomes of Dioscorea bulbifera. Phytochemistry. 2010 Jul;71(10):1174-80. doi: 10.1016/j.phytochem.2010.04.002. Epub 2010 May 7. [PubMed:20452632 ]
Zhang Z, Lin D, Li W, Gao H, Peng Y, Zheng J: Sensitive bromine-based screening of potential toxic furanoids in Dioscorea bulbifera L. J Chromatogr B Analyt Technol Biomed Life Sci. 2017 Jul 1;1057:1-14. doi: 10.1016/j.jchromb.2017.04.033. Epub 2017 Apr 23. [PubMed:28477535 ]
Liu JS, Gao WN, Zheng J, Wang GK, Yang QS: [Chemical constituents from fresh tubers of Dioscorea bulbifera]. Zhongguo Zhong Yao Za Zhi. 2017 Feb;42(3):510-516. doi: 10.19540/j.cnki.cjcmm.2017.0009. [PubMed:28952257 ]
LOTUS database [Link]

Showing NP-Card for methyl (2s,4as,6as,7r,9r,10ar,10bs)-2-(furan-3-yl)-9-hydroxy-10b-methyl-4,6-dioxo-decahydronaphtho[2,1-c]pyran-7-carboxylate (NP0258549)

MOL for NP0258549 (methyl (2s,4as,6as,7r,9r,10ar,10bs)-2-(furan-3-yl)-9-hydroxy-10b-methyl-4,6-dioxo-decahydronaphtho[2,1-c]pyran-7-carboxylate)

3D MOL for NP0258549 (methyl (2s,4as,6as,7r,9r,10ar,10bs)-2-(furan-3-yl)-9-hydroxy-10b-methyl-4,6-dioxo-decahydronaphtho[2,1-c]pyran-7-carboxylate)

3D SDF for NP0258549 (methyl (2s,4as,6as,7r,9r,10ar,10bs)-2-(furan-3-yl)-9-hydroxy-10b-methyl-4,6-dioxo-decahydronaphtho[2,1-c]pyran-7-carboxylate)

3D-SDF for NP0258549 (methyl (2s,4as,6as,7r,9r,10ar,10bs)-2-(furan-3-yl)-9-hydroxy-10b-methyl-4,6-dioxo-decahydronaphtho[2,1-c]pyran-7-carboxylate)

PDB for NP0258549 (methyl (2s,4as,6as,7r,9r,10ar,10bs)-2-(furan-3-yl)-9-hydroxy-10b-methyl-4,6-dioxo-decahydronaphtho[2,1-c]pyran-7-carboxylate)

3D PDB for NP0258549 (methyl (2s,4as,6as,7r,9r,10ar,10bs)-2-(furan-3-yl)-9-hydroxy-10b-methyl-4,6-dioxo-decahydronaphtho[2,1-c]pyran-7-carboxylate)

SMILES for NP0258549 (methyl (2s,4as,6as,7r,9r,10ar,10bs)-2-(furan-3-yl)-9-hydroxy-10b-methyl-4,6-dioxo-decahydronaphtho[2,1-c]pyran-7-carboxylate)

INCHI for NP0258549 (methyl (2s,4as,6as,7r,9r,10ar,10bs)-2-(furan-3-yl)-9-hydroxy-10b-methyl-4,6-dioxo-decahydronaphtho[2,1-c]pyran-7-carboxylate)

Structure for NP0258549 (methyl (2s,4as,6as,7r,9r,10ar,10bs)-2-(furan-3-yl)-9-hydroxy-10b-methyl-4,6-dioxo-decahydronaphtho[2,1-c]pyran-7-carboxylate)

3D Structure for NP0258549 (methyl (2s,4as,6as,7r,9r,10ar,10bs)-2-(furan-3-yl)-9-hydroxy-10b-methyl-4,6-dioxo-decahydronaphtho[2,1-c]pyran-7-carboxylate)