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Showing NP-Card for 1-[(prop-2-en-1-yloxy)-λ⁴-disulfanyl]propane (NP0257368)

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Record Information
Version2.0
Created at2022-09-07 22:28:34 UTC
Updated at2022-09-07 22:28:34 UTC
NP-MRD IDNP0257368
Secondary Accession NumbersNone
Natural Product Identification
Common Name1-[(prop-2-en-1-yloxy)-λ⁴-disulfanyl]propane
DescriptionSCHEMBL10811391 belongs to the class of organic compounds known as organosulfur compounds. These are organic compounds containing a carbon-sulfur bond. 1-[(prop-2-en-1-yloxy)-λ⁴-disulfanyl]propane is found in Allium sativum. Based on a literature review very few articles have been published on SCHEMBL10811391.
Structure
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MOL3D MOLSDFPDBSMILESInChI

MOL for NP0257368 (1-[(prop-2-en-1-yloxy)-λ⁴-disulfanyl]propane)


  Mrv1652309082200282D          

  9  8  0  0  0  0            999 V2000
    1.0461    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7605    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4750    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1895    1.8414    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9039    1.4289    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    3.9039    0.6039    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    4.6184    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3329    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0474    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
M  END
Download

3D MOL for NP0257368 (1-[(prop-2-en-1-yloxy)-λ⁴-disulfanyl]propane)

     RDKit          3D

 21 20  0  0  0  0  0  0  0  0999 V2000
    4.0105   -0.3295   -0.3217 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2498    0.7384   -0.2267 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8597    0.6163    0.2435 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9961    1.0815   -0.7675 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5735    0.9325   -0.2096 S   0  0  0  0  0  4  0  0  0  0  0  0
   -1.0167    2.0232    1.0014 S   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0469   -0.7612    0.1222 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4784   -0.7468    0.6161 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3114   -0.1330   -0.5038 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0478   -0.2843   -0.6661 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6463   -1.3096   -0.0630 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6488    1.7052   -0.4950 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5852   -0.4177    0.4732 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6622    1.2304    1.1608 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3857   -1.2411    0.8738 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9428   -1.3319   -0.8144 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6081   -0.0744    1.4881 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8836   -1.7397    0.8193 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3676   -0.8555   -1.3290 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7826    0.8148   -0.7889 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3092    0.0822   -0.0513 H   0  0  0  0  0  0  0  0  0  0  0  0
  9  8  1  0
  8  7  1  0
  7  5  1  0
  5  6  2  0
  5  4  1  1
  4  3  1  0
  3  2  1  0
  2  1  2  3
  9 19  1  0
  9 20  1  0
  9 21  1  0
  8 17  1  0
  8 18  1  0
  7 15  1  0
  7 16  1  0
  3 13  1  0
  3 14  1  0
  2 12  1  0
  1 10  1  0
  1 11  1  0
M  END
Download

3D SDF for NP0257368 (1-[(prop-2-en-1-yloxy)-λ⁴-disulfanyl]propane)


  Mrv1652309082200282D          

  9  8  0  0  0  0            999 V2000
    1.0461    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7605    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4750    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1895    1.8414    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9039    1.4289    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    3.9039    0.6039    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    4.6184    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3329    1.4289    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0474    1.8414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  5  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0257368

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CCCS(=S)OCC=C

> <INCHI_IDENTIFIER>
InChI=1S/C6H12OS2/c1-3-5-7-9(8)6-4-2/h3H,1,4-6H2,2H3

> <INCHI_KEY>
LMOYPFJLEKSDTA-UHFFFAOYSA-N

> <FORMULA>
C6H12OS2

> <MOLECULAR_WEIGHT>
164.28

> <EXACT_MASS>
164.032957354

> <JCHEM_ACCEPTOR_COUNT>
0

> <JCHEM_ATOM_COUNT>
21

> <JCHEM_AVERAGE_POLARIZABILITY>
17.828456999631204

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
1-[(prop-2-en-1-yloxy)-lambda4-disulfanyl]propane

> <JCHEM_LOGP>
2.4124

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_POLAR_SURFACE_AREA>
9.23

> <JCHEM_REFRACTIVITY>
46.5345

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
1-[(prop-2-en-1-yloxy)-lambda4-disulfanyl]propane

> <JCHEM_VEBER_RULE>
1

$$$$
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3D-SDF for NP0257368 (1-[(prop-2-en-1-yloxy)-λ⁴-disulfanyl]propane)

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PDB for NP0257368 (1-[(prop-2-en-1-yloxy)-λ⁴-disulfanyl]propane)
HEADER    PROTEIN                                 08-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   08-SEP-22         0                                  
HETATM    1  C   UNK     0       1.953   2.667   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       3.286   3.437   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       4.620   2.667   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0       5.954   3.437   0.000  0.00  0.00           O+0
HETATM    5  S   UNK     0       7.287   2.667   0.000  0.00  0.00           S+0
HETATM    6  S   UNK     0       7.287   1.127   0.000  0.00  0.00           S+0
HETATM    7  C   UNK     0       8.621   3.437   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       9.955   2.667   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      11.288   3.437   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6    7                                                  
CONECT    6    5                                                            
CONECT    7    5    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8                                                            
MASTER        0    0    0    0    0    0    0    0    9    0   16    0
END

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3D PDB for NP0257368 (1-[(prop-2-en-1-yloxy)-λ⁴-disulfanyl]propane)
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SMILES for NP0257368 (1-[(prop-2-en-1-yloxy)-λ⁴-disulfanyl]propane)
CCCS(=S)OCC=C
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INCHI for NP0257368 (1-[(prop-2-en-1-yloxy)-λ⁴-disulfanyl]propane)
InChI=1S/C6H12OS2/c1-3-5-7-9(8)6-4-2/h3H,1,4-6H2,2H3
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View in JSmol
SynonymsNot Available
Chemical FormulaC6H12OS2
Average Mass164.2800 Da
Monoisotopic Mass164.03296 Da
IUPAC Name1-[(prop-2-en-1-yloxy)-lambda4-disulfanyl]propane
Traditional Name1-[(prop-2-en-1-yloxy)-lambda4-disulfanyl]propane
CAS Registry NumberNot Available
SMILES
CCCS(=S)OCC=C
InChI Identifier
InChI=1S/C6H12OS2/c1-3-5-7-9(8)6-4-2/h3H,1,4-6H2,2H3
InChI KeyLMOYPFJLEKSDTA-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Allium sativumLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as organosulfur compounds. These are organic compounds containing a carbon-sulfur bond.
KingdomOrganic compounds  
Super ClassOrganosulfur compounds  
ClassNot Available
Sub ClassNot Available
Direct ParentOrganosulfur compounds  
Alternative Parents
Substituents
  • Organic oxygen compound
    • 

  • Hydrocarbon derivative
    • 

  • Organosulfur compound
    • 

  • Organooxygen compound
    • 

  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP2.41ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count0ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area9.23 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity46.53 m³·mol⁻¹ChemAxon
Polarizability17.83 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound54041381  
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. LOTUS database [Link]