NP-MRD: Showing NP-Card for (2r,3r)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]butane-1,2,4-triol (NP0257094)

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Record Information

Version

2.0

Created at

2022-09-07 22:07:31 UTC

Updated at

2022-09-07 22:07:31 UTC

NP-MRD ID

NP0257094

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(2r,3r)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]butane-1,2,4-triol

Description

(2R,3R)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]butane-1,2,4-triol belongs to the class of organic compounds known as dibenzylbutanediol lignans. These are lignan compounds containing a 2,3-dibenzylbutane-1,4-diol moiety. (2r,3r)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]butane-1,2,4-triol is found in Carissa carandas and Carissa spinarum. Based on a literature review very few articles have been published on (2R,3R)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]butane-1,2,4-triol.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309082200072D          

 27 28  0  0  1  0            999 V2000
   -1.5691    0.0809    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7441    0.0809    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3316   -0.6336    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4934   -0.6336    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9059   -1.3480    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7309   -1.3480    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -2.0625    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.7309   -2.7770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -3.4914    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9684   -2.0625    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.9684   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9684   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6829   -0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7934   -2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2059   -2.7770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0309   -2.7770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4434   -3.4914    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0309   -4.2059    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4434   -4.9204    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2059   -4.2059    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7934   -4.9204    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9684   -4.9204    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7934   -3.4914    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4934   -2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3316   -2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7441   -1.3480    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5691   -1.3480    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  7  6  1  1  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  7 10  1  0  0  0  0
 10 11  1  6  0  0  0
 10 12  1  6  0  0  0
 12 13  1  0  0  0  0
 10 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 18 19  1  0  0  0  0
 18 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 20 23  2  0  0  0  0
 15 23  1  0  0  0  0
  5 24  2  0  0  0  0
 24 25  1  0  0  0  0
 25 26  2  0  0  0  0
  3 26  1  0  0  0  0
 26 27  1  0  0  0  0
M  END

     RDKit          3D

 53 54  0  0  0  0  0  0  0  0999 V2000
   -5.7252    2.0189    0.1678 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4999    0.9420    1.0404 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4381    0.0606    0.7724 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6186    0.2187   -0.3105 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5772   -0.6309   -0.5887 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7298   -0.5154   -1.7455 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5955    0.3904   -1.8127 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0531    0.2125   -3.1990 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4790   -1.0880   -3.4107 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4756    0.3809   -0.7859 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.3888    1.3992   -1.2744 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0416    0.8712    0.5863 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6011    2.0958    0.3991 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2533   -0.8682   -0.6151 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2881   -0.7838    0.4378 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0825   -1.1145    1.7603 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0700   -1.0203    2.7157 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3110   -0.5788    2.3363 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3206   -0.4808    3.3055 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.5564   -0.2399    1.0305 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8329    0.1995    0.7128 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.1563    0.5702   -0.6349 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5426   -0.3435    0.0835 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3835   -1.6930    0.3041 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2131   -1.8578    1.4055 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2448   -0.9930    1.6571 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1000   -1.1172    2.7447 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3873    2.7857    0.6581 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2206    1.7293   -0.7796 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7967    2.5774   -0.0922 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7903    1.0401   -0.9770 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4060   -0.2814   -2.6362 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3758   -1.5651   -2.0202 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9176    1.4892   -1.8641 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8944    0.8922   -3.3389 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6987    0.4400   -4.0025 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0460   -1.5197   -4.1855 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8656    2.2594   -1.2966 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9659    1.0445    1.2294 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5726    0.2153    1.1627 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1033    2.3959    1.1807 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6079   -1.7454   -0.4752 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8209   -1.0704   -1.5712 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1252   -1.4571    2.0625 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8483   -1.2941    3.7372 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1473   -0.7259    4.2551 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3525    1.2589   -0.9766 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1122    1.1443   -0.6326 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2620   -0.3241   -1.2687 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7984   -0.0616   -0.9289 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5898   -2.3973    0.1461 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0673   -2.6807    2.1023 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0455   -1.8309    3.4291 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  7 10  1  0
 10 11  1  6
 10 12  1  0
 12 13  1  0
 10 14  1  0
 14 15  1  0
 15 16  2  0
 16 17  1  0
 17 18  2  0
 18 19  1  0
 18 20  1  0
 20 21  1  0
 21 22  1  0
 20 23  2  0
  5 24  2  0
 24 25  1  0
 25 26  2  0
 26 27  1  0
 26  3  1  0
 23 15  1  0
  1 28  1  0
  1 29  1  0
  1 30  1  0
  4 31  1  0
  6 32  1  0
  6 33  1  0
  7 34  1  6
  8 35  1  0
  8 36  1  0
  9 37  1  0
 11 38  1  0
 12 39  1  0
 12 40  1  0
 13 41  1  0
 14 42  1  0
 14 43  1  0
 16 44  1  0
 17 45  1  0
 19 46  1  0
 22 47  1  0
 22 48  1  0
 22 49  1  0
 23 50  1  0
 24 51  1  0
 25 52  1  0
 27 53  1  0
M  END


  Mrv1652309082200072D          

 27 28  0  0  1  0            999 V2000
   -1.5691    0.0809    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7441    0.0809    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3316   -0.6336    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4934   -0.6336    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9059   -1.3480    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7309   -1.3480    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -2.0625    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.7309   -2.7770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -3.4914    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9684   -2.0625    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.9684   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9684   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6829   -0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.7934   -2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2059   -2.7770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0309   -2.7770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4434   -3.4914    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0309   -4.2059    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4434   -4.9204    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2059   -4.2059    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7934   -4.9204    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9684   -4.9204    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7934   -3.4914    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4934   -2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3316   -2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7441   -1.3480    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5691   -1.3480    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  1  0  0  0  0
  7  6  1  1  0  0  0
  7  8  1  0  0  0  0
  8  9  1  0  0  0  0
  7 10  1  0  0  0  0
 10 11  1  6  0  0  0
 10 12  1  6  0  0  0
 12 13  1  0  0  0  0
 10 14  1  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 18 19  1  0  0  0  0
 18 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 20 23  2  0  0  0  0
 15 23  1  0  0  0  0
  5 24  2  0  0  0  0
 24 25  1  0  0  0  0
 25 26  2  0  0  0  0
  3 26  1  0  0  0  0
 26 27  1  0  0  0  0
M  END
> <DATABASE_ID>
NP0257094

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC1=CC(C[C@H](CO)[C@@](O)(CO)CC2=CC=C(O)C(OC)=C2)=CC=C1O

> <INCHI_IDENTIFIER>
InChI=1S/C20H26O7/c1-26-18-8-13(3-5-16(18)23)7-15(11-21)20(25,12-22)10-14-4-6-17(24)19(9-14)27-2/h3-6,8-9,15,21-25H,7,10-12H2,1-2H3/t15-,20+/m1/s1

> <INCHI_KEY>
INPPVVSEQRZCLJ-QRWLVFNGSA-N

> <FORMULA>
C20H26O7

> <MOLECULAR_WEIGHT>
378.421

> <EXACT_MASS>
378.167853177

> <JCHEM_ACCEPTOR_COUNT>
7

> <JCHEM_ATOM_COUNT>
53

> <JCHEM_AVERAGE_POLARIZABILITY>
39.97224936444844

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
5

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(2R,3R)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]butane-1,2,4-triol

> <JCHEM_LOGP>
1.2930717746666671

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
2

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
10.504625937125484

> <JCHEM_PKA_STRONGEST_ACIDIC>
9.896429793662293

> <JCHEM_PKA_STRONGEST_BASIC>
-2.639041942906026

> <JCHEM_POLAR_SURFACE_AREA>
119.61000000000001

> <JCHEM_REFRACTIVITY>
100.63929999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
9

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(2R,3R)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]butane-1,2,4-triol

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 08-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   08-SEP-22         0                                  
HETATM    1  C   UNK     0      -2.929   0.151   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0      -1.389   0.151   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0      -0.619  -1.183   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       0.921  -1.183   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       1.691  -2.516   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       3.231  -2.516   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       4.001  -3.850   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       3.231  -5.184   0.000  0.00  0.00           C+0
HETATM    9  O   UNK     0       4.001  -6.517   0.000  0.00  0.00           O+0
HETATM   10  C   UNK     0       5.541  -3.850   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0       5.541  -5.390   0.000  0.00  0.00           O+0
HETATM   12  C   UNK     0       5.541  -2.310   0.000  0.00  0.00           C+0
HETATM   13  O   UNK     0       6.875  -1.540   0.000  0.00  0.00           O+0
HETATM   14  C   UNK     0       7.081  -3.850   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       7.851  -5.184   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       9.391  -5.184   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      10.161  -6.517   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       9.391  -7.851   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0      10.161  -9.185   0.000  0.00  0.00           O+0
HETATM   20  C   UNK     0       7.851  -7.851   0.000  0.00  0.00           C+0
HETATM   21  O   UNK     0       7.081  -9.185   0.000  0.00  0.00           O+0
HETATM   22  C   UNK     0       5.541  -9.185   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       7.081  -6.517   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       0.921  -3.850   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      -0.619  -3.850   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      -1.389  -2.516   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0      -2.929  -2.516   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4   26                                                  
CONECT    4    3    5                                                       
CONECT    5    4    6   24                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8   10                                                  
CONECT    8    7    9                                                       
CONECT    9    8                                                            
CONECT   10    7   11   12   14                                             
CONECT   11   10                                                            
CONECT   12   10   13                                                       
CONECT   13   12                                                            
CONECT   14   10   15                                                       
CONECT   15   14   16   23                                                  
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19   20                                                  
CONECT   19   18                                                            
CONECT   20   18   21   23                                                  
CONECT   21   20   22                                                       
CONECT   22   21                                                            
CONECT   23   20   15                                                       
CONECT   24    5   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25    3   27                                                  
CONECT   27   26                                                            
MASTER        0    0    0    0    0    0    0    0   27    0   56    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₀H₂₆O₇

Average Mass

378.4210 Da

Monoisotopic Mass

378.16785 Da

IUPAC Name

(2R,3R)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]butane-1,2,4-triol

Traditional Name

(2R,3R)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]butane-1,2,4-triol

CAS Registry Number

Not Available

SMILES

COC1=CC(C[C@H](CO)[C@@](O)(CO)CC2=CC=C(O)C(OC)=C2)=CC=C1O

InChI Identifier

InChI=1S/C20H26O7/c1-26-18-8-13(3-5-16(18)23)7-15(11-21)20(25,12-22)10-14-4-6-17(24)19(9-14)27-2/h3-6,8-9,15,21-25H,7,10-12H2,1-2H3/t15-,20+/m1/s1

InChI Key

INPPVVSEQRZCLJ-QRWLVFNGSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Carissa carandas	LOTUS Database	35616633
Carissa spinarum	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as dibenzylbutanediol lignans. These are lignan compounds containing a 2,3-dibenzylbutane-1,4-diol moiety.

Kingdom

Organic compounds

Super Class

Lignans, neolignans and related compounds

Class

Dibenzylbutane lignans

Sub Class

Dibenzylbutanediol lignans

Direct Parent

Dibenzylbutanediol lignans

Alternative Parents

Substituents

Dibenzylbutanediol
Methoxyphenol
Anisole
Phenoxy compound
Phenol ether
Methoxybenzene
Phenol
1-hydroxy-2-unsubstituted benzenoid
Alkyl aryl ether
Monocyclic benzene moiety
Benzenoid
Tertiary alcohol
Polyol
Ether
Primary alcohol
Alcohol
Organooxygen compound
Hydrocarbon derivative
Organic oxygen compound
Aromatic homomonocyclic compound

Molecular Framework

Aromatic homomonocyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	1.29	ChemAxon
pKa (Strongest Acidic)	9.9	ChemAxon
pKa (Strongest Basic)	-2.6	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	7	ChemAxon
Hydrogen Donor Count	5	ChemAxon
Polar Surface Area	119.61 Å²	ChemAxon
Rotatable Bond Count	9	ChemAxon
Refractivity	100.64 m³·mol⁻¹	ChemAxon
Polarizability	39.97 Å³	ChemAxon
Number of Rings	2	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

162866333

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (2r,3r)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]butane-1,2,4-triol (NP0257094)

MOL for NP0257094 ((2r,3r)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]butane-1,2,4-triol)

3D MOL for NP0257094 ((2r,3r)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]butane-1,2,4-triol)

3D SDF for NP0257094 ((2r,3r)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]butane-1,2,4-triol)

3D-SDF for NP0257094 ((2r,3r)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]butane-1,2,4-triol)

PDB for NP0257094 ((2r,3r)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]butane-1,2,4-triol)

3D PDB for NP0257094 ((2r,3r)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]butane-1,2,4-triol)

SMILES for NP0257094 ((2r,3r)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]butane-1,2,4-triol)

INCHI for NP0257094 ((2r,3r)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]butane-1,2,4-triol)

Structure for NP0257094 ((2r,3r)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]butane-1,2,4-triol)

3D Structure for NP0257094 ((2r,3r)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]butane-1,2,4-triol)