NP-MRD: Showing NP-Card for (1s,13r,16s,17s)-17-hydroxy-5,7-dioxa-12-azapentacyclo[10.5.2.0¹,¹³.0²,¹⁰.0⁴,⁸]nonadeca-2,4(8),9-trien-16-yl acetate (NP0254876)

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Record Information

Version

1.0

Created at

2022-09-07 19:10:04 UTC

Updated at

2022-09-07 19:10:04 UTC

NP-MRD ID

NP0254876

Secondary Accession Numbers

None

Natural Product Identification

Common Name

(1s,13r,16s,17s)-17-hydroxy-5,7-dioxa-12-azapentacyclo[10.5.2.0¹,¹³.0²,¹⁰.0⁴,⁸]nonadeca-2,4(8),9-trien-16-yl acetate

Description

Josephinine belongs to the class of organic compounds known as phenanthridines and derivatives. These are polycyclic compounds containing a phenanthridine moiety, which is a tricyclic system with two benzene rings joined by a pyridine forming a non-linear skeleton. Hydrogenated derivatives are also included. Based on a literature review very few articles have been published on Josephinine.

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309072221102D          

 24 28  0  0  1  0            999 V2000
    3.1311   -2.0773    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7733   -1.5594    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5429   -1.8566    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6459   -0.7443    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8763   -0.4471    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.7489    0.3680    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8836    0.7321    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3371    0.1473    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7627    0.9108    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.3689    0.1858    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6902   -0.5740    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4645   -0.6678    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.1539   -0.3143    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8475   -0.7611    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5812   -0.3839    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6214    0.4401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9279    0.8869    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1941    0.5098    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5750    1.0550    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4175    0.6565    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8693   -0.0338    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3524   -0.6768    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2341   -0.9650    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3615   -1.7801    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  2  4  1  0  0  0  0
  5  4  1  6  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  6  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 12 11  1  1  0  0  0
  8 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 13 18  1  0  0  0  0
 18 19  1  0  0  0  0
  9 19  1  0  0  0  0
 16 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 15 22  1  0  0  0  0
 12 23  1  0  0  0  0
  5 23  1  0  0  0  0
 23 24  1  1  0  0  0
M  END

     RDKit          3D

 45 49  0  0  0  0  0  0  0  0999 V2000
    5.5626   -1.3728    0.9851 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0874   -1.1965    1.1867 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4514   -1.9488    1.9850 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.3573   -0.2327    0.5338 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9631   -0.0399    0.7019 C   0  0  1  0  0  0  0  0  0  0  0  0
    1.7461    1.2988    1.2946 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2508    2.2377    0.1799 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1212    1.7637   -0.0997 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.9242    2.4971   -1.0003 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2811    2.2089   -2.2757 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2552    0.6971   -2.2370 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0544    0.3807   -0.7417 C   0  0  2  0  0  0  0  0  0  0  0  0
   -1.3123   -0.2191   -0.2929 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4864   -1.4476    0.2606 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7521   -1.9126    0.6555 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8498   -1.0978    0.4763 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6552    0.1574   -0.0915 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4063    0.6045   -0.4763 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2650    1.9740   -1.0778 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9566   -1.7883    0.9432 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5488   -2.9373    1.6623 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2075   -3.0905    1.2307 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2063   -0.3107   -0.5648 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.1109   -1.6621   -0.8454 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.0387   -0.3708    0.7833 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.9697   -1.6924    1.9728 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7789   -2.0790    0.1726 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6431   -0.8170    1.4458 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9526    1.2299    2.0773 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6845    1.6861    1.7281 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9735    2.1186   -0.6470 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2604    3.2463    0.6214 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6574    1.7368    0.8938 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9466    2.5924   -3.0871 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7340    2.6376   -2.3375 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1524    0.2406   -2.6454 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6134    0.3273   -2.8240 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6861   -2.1520    0.4439 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5431    0.7907   -0.2254 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6314    1.9537   -2.1324 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9250    2.6988   -0.5373 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1646   -3.8278    1.4231 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5129   -2.7344    2.7636 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9161    0.0598   -1.3801 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9946   -2.1090   -0.9018 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 12 11  1  6
 12 23  1  0
 23 24  1  0
 12 13  1  0
 13 14  2  0
 14 15  1  0
 15 16  2  0
 16 20  1  0
 20 21  1  0
 21 22  1  0
 16 17  1  0
 17 18  2  0
 18 19  1  0
 23  5  1  0
 18 13  1  0
 12  8  1  0
 22 15  1  0
 19  9  1  0
  1 25  1  0
  1 26  1  0
  1 27  1  0
  5 28  1  1
  6 29  1  0
  6 30  1  0
  7 31  1  0
  7 32  1  0
  8 33  1  1
 10 34  1  0
 10 35  1  0
 11 36  1  0
 11 37  1  0
 23 44  1  6
 24 45  1  0
 14 38  1  0
 21 42  1  0
 21 43  1  0
 17 39  1  0
 19 40  1  0
 19 41  1  0
M  END


  Mrv1652309072221102D          

 24 28  0  0  1  0            999 V2000
    3.1311   -2.0773    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7733   -1.5594    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5429   -1.8566    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6459   -0.7443    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8763   -0.4471    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.7489    0.3680    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8836    0.7321    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3371    0.1473    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7627    0.9108    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.3689    0.1858    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6902   -0.5740    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4645   -0.6678    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.1539   -0.3143    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8475   -0.7611    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5812   -0.3839    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6214    0.4401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9279    0.8869    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1941    0.5098    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5750    1.0550    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4175    0.6565    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8693   -0.0338    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3524   -0.6768    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2341   -0.9650    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.3615   -1.7801    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  2  0  0  0  0
  2  4  1  0  0  0  0
  5  4  1  6  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8  9  1  6  0  0  0
  9 10  1  0  0  0  0
 10 11  1  0  0  0  0
 12 11  1  1  0  0  0
  8 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 13 18  1  0  0  0  0
 18 19  1  0  0  0  0
  9 19  1  0  0  0  0
 16 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 15 22  1  0  0  0  0
 12 23  1  0  0  0  0
  5 23  1  0  0  0  0
 23 24  1  1  0  0  0
M  END
> <DATABASE_ID>
NP0254876

> <DATABASE_NAME>
NP-MRD

> <SMILES>
CC(=O)O[C@H]1CC[C@H]2N3CC[C@]2([C@@H]1O)C1=CC2=C(OCO2)C=C1C3

> <INCHI_IDENTIFIER>
InChI=1S/C18H21NO5/c1-10(20)24-13-2-3-16-18(17(13)21)4-5-19(16)8-11-6-14-15(7-12(11)18)23-9-22-14/h6-7,13,16-17,21H,2-5,8-9H2,1H3/t13-,16+,17+,18-/m0/s1

> <INCHI_KEY>
SYGLXKHSDQIUFZ-LIRZEXBASA-N

> <FORMULA>
C18H21NO5

> <MOLECULAR_WEIGHT>
331.368

> <EXACT_MASS>
331.14197278

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
45

> <JCHEM_AVERAGE_POLARIZABILITY>
34.65283582914502

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
(1S,13R,16S,17S)-17-hydroxy-5,7-dioxa-12-azapentacyclo[10.5.2.0^{1,13}.0^{2,10}.0^{4,8}]nonadeca-2,4(8),9-trien-16-yl acetate

> <JCHEM_LOGP>
0.9025562686666662

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.579123045011517

> <JCHEM_PKA_STRONGEST_BASIC>
8.666889218518303

> <JCHEM_POLAR_SURFACE_AREA>
68.23

> <JCHEM_REFRACTIVITY>
84.5854

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
(1S,13R,16S,17S)-17-hydroxy-5,7-dioxa-12-azapentacyclo[10.5.2.0^{1,13}.0^{2,10}.0^{4,8}]nonadeca-2,4(8),9-trien-16-yl acetate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 07-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   07-SEP-22         0                                  
HETATM    1  C   UNK     0       5.845  -3.878   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       7.043  -2.911   0.000  0.00  0.00           C+0
HETATM    3  O   UNK     0       8.480  -3.466   0.000  0.00  0.00           O+0
HETATM    4  O   UNK     0       6.806  -1.389   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       5.369  -0.835   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       5.131   0.687   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       3.516   1.367   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       2.496   0.275   0.000  0.00  0.00           C+0
HETATM    9  N   UNK     0       1.424   1.700   0.000  0.00  0.00           N+0
HETATM   10  C   UNK     0       0.689   0.347   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       1.288  -1.072   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       2.734  -1.246   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       4.021  -0.587   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       5.315  -1.421   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       6.685  -0.717   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       6.760   0.822   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       5.465   1.656   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       4.096   0.952   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       2.940   1.969   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0       8.246   1.225   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0       9.089  -0.063   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0       8.125  -1.263   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0       4.170  -1.801   0.000  0.00  0.00           C+0
HETATM   24  O   UNK     0       4.408  -3.323   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3    4                                                  
CONECT    3    2                                                            
CONECT    4    2    5                                                       
CONECT    5    4    6   23                                                  
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9   12                                                  
CONECT    9    8   10   19                                                  
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11    8   13   23                                             
CONECT   13   12   14   18                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16   22                                                  
CONECT   16   15   17   20                                                  
CONECT   17   16   18                                                       
CONECT   18   17   13   19                                                  
CONECT   19   18    9                                                       
CONECT   20   16   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   15                                                       
CONECT   23   12    5   24                                                  
CONECT   24   23                                                            
MASTER        0    0    0    0    0    0    0    0   24    0   56    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₁₈H₂₁NO₅

Average Mass

331.3680 Da

Monoisotopic Mass

331.14197 Da

IUPAC Name

(1S,13R,16S,17S)-17-hydroxy-5,7-dioxa-12-azapentacyclo[10.5.2.0^{1,13}.0^{2,10}.0^{4,8}]nonadeca-2,4(8),9-trien-16-yl acetate

Traditional Name

(1S,13R,16S,17S)-17-hydroxy-5,7-dioxa-12-azapentacyclo[10.5.2.0^{1,13}.0^{2,10}.0^{4,8}]nonadeca-2,4(8),9-trien-16-yl acetate

CAS Registry Number

Not Available

SMILES

CC(=O)O[C@H]1CC[C@H]2N3CC[C@]2([C@@H]1O)C1=CC2=C(OCO2)C=C1C3

InChI Identifier

InChI=1S/C18H21NO5/c1-10(20)24-13-2-3-16-18(17(13)21)4-5-19(16)8-11-6-14-15(7-12(11)18)23-9-22-14/h6-7,13,16-17,21H,2-5,8-9H2,1H3/t13-,16+,17+,18-/m0/s1

InChI Key

SYGLXKHSDQIUFZ-LIRZEXBASA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Not Available

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as phenanthridines and derivatives. These are polycyclic compounds containing a phenanthridine moiety, which is a tricyclic system with two benzene rings joined by a pyridine forming a non-linear skeleton. Hydrogenated derivatives are also included.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Quinolines and derivatives

Sub Class

Benzoquinolines

Direct Parent

Phenanthridines and derivatives

Alternative Parents

Substituents

Phenanthridine
Benzazepine
Tetrahydroisoquinoline
Benzodioxole
Indole or derivatives
Azepine
Aralkylamine
Benzenoid
N-alkylpyrrolidine
Pyrrolidine
Cyclic alcohol
Tertiary aliphatic amine
Tertiary amine
Secondary alcohol
Amino acid or derivatives
Carboxylic acid ester
Oxacycle
Azacycle
Acetal
Carboxylic acid derivative
Monocarboxylic acid or derivatives
Alcohol
Organopnictogen compound
Organonitrogen compound
Carbonyl group
Organic oxygen compound
Organic nitrogen compound
Organooxygen compound
Organic oxide
Amine
Hydrocarbon derivative
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source
logP	0.9	ChemAxon
pKa (Strongest Acidic)	13.58	ChemAxon
pKa (Strongest Basic)	8.67	ChemAxon
Physiological Charge	1	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	1	ChemAxon
Polar Surface Area	68.23 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	84.59 m³·mol⁻¹	ChemAxon
Polarizability	34.65 Å³	ChemAxon
Number of Rings	5	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

102276357

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

LOTUS database [Link]

Showing NP-Card for (1s,13r,16s,17s)-17-hydroxy-5,7-dioxa-12-azapentacyclo[10.5.2.0¹,¹³.0²,¹⁰.0⁴,⁸]nonadeca-2,4(8),9-trien-16-yl acetate (NP0254876)

MOL for NP0254876 ((1s,13r,16s,17s)-17-hydroxy-5,7-dioxa-12-azapentacyclo[10.5.2.0¹,¹³.0²,¹⁰.0⁴,⁸]nonadeca-2,4(8),9-trien-16-yl acetate)

3D MOL for NP0254876 ((1s,13r,16s,17s)-17-hydroxy-5,7-dioxa-12-azapentacyclo[10.5.2.0¹,¹³.0²,¹⁰.0⁴,⁸]nonadeca-2,4(8),9-trien-16-yl acetate)

3D SDF for NP0254876 ((1s,13r,16s,17s)-17-hydroxy-5,7-dioxa-12-azapentacyclo[10.5.2.0¹,¹³.0²,¹⁰.0⁴,⁸]nonadeca-2,4(8),9-trien-16-yl acetate)

3D-SDF for NP0254876 ((1s,13r,16s,17s)-17-hydroxy-5,7-dioxa-12-azapentacyclo[10.5.2.0¹,¹³.0²,¹⁰.0⁴,⁸]nonadeca-2,4(8),9-trien-16-yl acetate)

PDB for NP0254876 ((1s,13r,16s,17s)-17-hydroxy-5,7-dioxa-12-azapentacyclo[10.5.2.0¹,¹³.0²,¹⁰.0⁴,⁸]nonadeca-2,4(8),9-trien-16-yl acetate)

3D PDB for NP0254876 ((1s,13r,16s,17s)-17-hydroxy-5,7-dioxa-12-azapentacyclo[10.5.2.0¹,¹³.0²,¹⁰.0⁴,⁸]nonadeca-2,4(8),9-trien-16-yl acetate)

SMILES for NP0254876 ((1s,13r,16s,17s)-17-hydroxy-5,7-dioxa-12-azapentacyclo[10.5.2.0¹,¹³.0²,¹⁰.0⁴,⁸]nonadeca-2,4(8),9-trien-16-yl acetate)

INCHI for NP0254876 ((1s,13r,16s,17s)-17-hydroxy-5,7-dioxa-12-azapentacyclo[10.5.2.0¹,¹³.0²,¹⁰.0⁴,⁸]nonadeca-2,4(8),9-trien-16-yl acetate)

Structure for NP0254876 ((1s,13r,16s,17s)-17-hydroxy-5,7-dioxa-12-azapentacyclo[10.5.2.0¹,¹³.0²,¹⁰.0⁴,⁸]nonadeca-2,4(8),9-trien-16-yl acetate)

3D Structure for NP0254876 ((1s,13r,16s,17s)-17-hydroxy-5,7-dioxa-12-azapentacyclo[10.5.2.0¹,¹³.0²,¹⁰.0⁴,⁸]nonadeca-2,4(8),9-trien-16-yl acetate)