Np mrd loader

Record Information
Version2.0
Created at2022-09-07 17:45:27 UTC
Updated at2022-09-07 17:45:28 UTC
NP-MRD IDNP0253783
Secondary Accession NumbersNone
Natural Product Identification
Common Name4-{[4'-(aminomethyl)-[1,1'-biphenyl]-3-yl]oxy}pyrimidine-2-carbonitrile
DescriptionCysteine Protease inhibitor belongs to the class of organic compounds known as biphenyls and derivatives. These are organic compounds containing to benzene rings linked together by a C-C bond. 4-{[4'-(aminomethyl)-[1,1'-biphenyl]-3-yl]oxy}pyrimidine-2-carbonitrile is found in Malus domestica. 4-{[4'-(aminomethyl)-[1,1'-biphenyl]-3-yl]oxy}pyrimidine-2-carbonitrile was first documented in 2022 (PMID: 36044342). Based on a literature review a small amount of articles have been published on Cysteine Protease inhibitor (PMID: 36007331) (PMID: 35874657) (PMID: 35713601).
Structure
Thumb
SynonymsNot Available
Chemical FormulaC18H14N4O
Average Mass302.3370 Da
Monoisotopic Mass302.11676 Da
IUPAC Name4-{[4'-(aminomethyl)-[1,1'-biphenyl]-3-yl]oxy}pyrimidine-2-carbonitrile
Traditional Name4-{[4'-(aminomethyl)-[1,1'-biphenyl]-3-yl]oxy}pyrimidine-2-carbonitrile
CAS Registry NumberNot Available
SMILES
NCC1=CC=C(C=C1)C1=CC(OC2=NC(=NC=C2)C#N)=CC=C1
InChI Identifier
InChI=1S/C18H14N4O/c19-11-13-4-6-14(7-5-13)15-2-1-3-16(10-15)23-18-8-9-21-17(12-20)22-18/h1-10H,11,19H2
InChI KeyRMVQVAZRAZGSTH-UHFFFAOYSA-N
Experimental Spectra
Not Available
Predicted Spectra
Spectrum TypeDescriptionDepositor IDDepositor OrganizationDepositorDeposition DateView
1D NMR13C NMR Spectrum (1D, 25 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 100 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 252 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 1000 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 50 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 200 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 75 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 300 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 101 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 400 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 126 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 500 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 151 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 600 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 176 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 700 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 201 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 800 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR13C NMR Spectrum (1D, 226 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
1D NMR1H NMR Spectrum (1D, 900 MHz, H2O, predicted)Wishart LabWishart LabDavid Wishart2021-06-20View Spectrum
Chemical Shift Submissions
Not Available
Species
Species of Origin
Species NameSourceReference
Malus domesticaLOTUS Database
Chemical Taxonomy
Description Belongs to the class of organic compounds known as biphenyls and derivatives. These are organic compounds containing to benzene rings linked together by a C-C bond.
KingdomOrganic compounds
Super ClassBenzenoids
ClassBenzene and substituted derivatives
Sub ClassBiphenyls and derivatives
Direct ParentBiphenyls and derivatives
Alternative Parents
Substituents
  • Biphenyl
  • Diaryl ether
  • Benzylamine
  • Phenoxy compound
  • Phenol ether
  • Phenylmethylamine
  • Aralkylamine
  • Pyrimidine
  • Heteroaromatic compound
  • Azacycle
  • Nitrile
  • Carbonitrile
  • Ether
  • Organoheterocyclic compound
  • Primary amine
  • Amine
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organonitrogen compound
  • Primary aliphatic amine
  • Cyanide
  • Organic oxygen compound
  • Organic nitrogen compound
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Physical Properties
StateNot Available
Experimental Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Predicted Properties
PropertyValueSource
logP3.47ChemAxon
pKa (Strongest Basic)9.27ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area84.82 ŲChemAxon
Rotatable Bond Count4ChemAxon
Refractivity88.27 m³·mol⁻¹ChemAxon
Polarizability32.1 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
HMDB IDNot Available
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FoodDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID10173124
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound12000657
PDB IDNot Available
ChEBI IDNot Available
Good Scents IDNot Available
References
General References
  1. Dos Santos AM, Oliveira ARS, da Costa CHS, Kenny PW, Montanari CA, Varela JJG Junior, Lameira J: Assessment of Reversibility for Covalent Cysteine Protease Inhibitors Using Quantum Mechanics/Molecular Mechanics Free Energy Surfaces. J Chem Inf Model. 2022 Sep 12;62(17):4083-4094. doi: 10.1021/acs.jcim.2c00466. Epub 2022 Aug 31. [PubMed:36044342 ]
  2. Wei R, Zhang L, Hu W, Wu J, Zhang W: CSTA plays a role in osteoclast formation and bone resorption by mediating the DAP12/TREM2 pathway. Biochem Biophys Res Commun. 2022 Oct 30;627:12-20. doi: 10.1016/j.bbrc.2022.08.033. Epub 2022 Aug 15. [PubMed:36007331 ]
  3. Novo E, Cappon A, Villano G, Quarta S, Cannito S, Bocca C, Turato C, Guido M, Maggiora M, Protopapa F, Sutti S, Provera A, Ruvoletto M, Biasiolo A, Foglia B, Albano E, Pontisso P, Parola M: SerpinB3 as a Pro-Inflammatory Mediator in the Progression of Experimental Non-Alcoholic Fatty Liver Disease. Front Immunol. 2022 Jul 8;13:910526. doi: 10.3389/fimmu.2022.910526. eCollection 2022. [PubMed:35874657 ]
  4. Tang Q, Liu J, Wang CB, An L, Zhang HL, Wang Y, Ren B, Yang SP, Liu JG: A multifunctional nanoplatform delivering carbon monoxide and a cysteine protease inhibitor to mitochondria under NIR light shows enhanced synergistic anticancer efficacy. Nanoscale. 2022 Jun 30;14(25):9097-9103. doi: 10.1039/d2nr01122k. [PubMed:35713601 ]
  5. LOTUS database [Link]