NP-MRD: Showing NP-Card for methyl 2-[(1s,2r,3s,4r,8r,9s,10r,13r,15s)-13-(furan-3-yl)-2,4-dihydroxy-4,8,10,12-tetramethyl-7-oxo-16-oxatetracyclo[8.6.0.0³,⁸.0¹¹,¹⁵]hexadeca-5,11-dien-9-yl]acetate (NP0253097)

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Record Information

Version

2.0

Created at

2022-09-07 16:51:59 UTC

Updated at

2022-09-07 16:51:59 UTC

NP-MRD ID

NP0253097

Secondary Accession Numbers

None

Natural Product Identification

Common Name

methyl 2-[(1s,2r,3s,4r,8r,9s,10r,13r,15s)-13-(furan-3-yl)-2,4-dihydroxy-4,8,10,12-tetramethyl-7-oxo-16-oxatetracyclo[8.6.0.0³,⁸.0¹¹,¹⁵]hexadeca-5,11-dien-9-yl]acetate

Description

NIMBANDIOL belongs to the class of organic compounds known as naphthofurans. Naphthofurans are compounds containing a furan ring fused to a naphthalene moiety. Furan is a 5 membered- ring aromatic ring with four carbon and one oxygen atoms. Naphthalene is a polycyclic aromatic hydrocarbon made up of two fused benzene rings. methyl 2-[(1s,2r,3s,4r,8r,9s,10r,13r,15s)-13-(furan-3-yl)-2,4-dihydroxy-4,8,10,12-tetramethyl-7-oxo-16-oxatetracyclo[8.6.0.0³,⁸.0¹¹,¹⁵]hexadeca-5,11-dien-9-yl]acetate is found in Azadirachta indica. methyl 2-[(1s,2r,3s,4r,8r,9s,10r,13r,15s)-13-(furan-3-yl)-2,4-dihydroxy-4,8,10,12-tetramethyl-7-oxo-16-oxatetracyclo[8.6.0.0³,⁸.0¹¹,¹⁵]hexadeca-5,11-dien-9-yl]acetate was first documented in 2014 (PMID: 24674886). Based on a literature review very few articles have been published on NIMBANDIOL (PMID: 33103616).

Structure

MOL 3D MOL SDF PDB SMILES InChI


  Mrv1652309072218522D          

 33 37  0  0  1  0            999 V2000
    2.7166    3.3997    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3447    2.8648    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.1955    2.0534    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8236    1.5185    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4182    1.7769    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2690    0.9655    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.8971    0.4306    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.1303    1.2219    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7149    0.5394    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3126    1.1082    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2037    1.9259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0381    0.7155    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.7823    1.0717    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9315    1.8831    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7493    1.9920    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1055    1.2479    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.5079    0.6791    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8889   -0.0959    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0712   -0.2047    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.4735   -0.7735    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7479   -0.3808    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.9707   -0.6573    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8215   -1.4687    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3426   -0.1224    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.5653   -0.3989    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.9725   -1.1164    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0706   -0.9246    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0628    0.1360    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0864    0.9474    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8637    1.2239    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0129    2.0353    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4918    0.6890    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.6410    1.5004    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  6  5  1  1  0  0  0
  6  7  1  0  0  0  0
  7  8  1  1  0  0  0
  7  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  6  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 13 17  2  0  0  0  0
 12 18  1  0  0  0  0
 18 19  1  0  0  0  0
  9 19  1  0  0  0  0
 19 20  1  6  0  0  0
 21 20  1  6  0  0  0
  7 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  6  0  0  0
 24 22  1  1  0  0  0
 24 25  1  0  0  0  0
 25 26  1  1  0  0  0
 25 27  1  6  0  0  0
 25 28  1  0  0  0  0
 28 29  2  0  0  0  0
 29 30  1  0  0  0  0
 30 31  2  0  0  0  0
 30 32  1  0  0  0  0
 24 32  1  0  0  0  0
  6 32  1  0  0  0  0
 32 33  1  1  0  0  0
M  END

     RDKit          3D

 65 69  0  0  0  0  0  0  0  0999 V2000
   -3.7535    4.0801    1.2518 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0721    3.1629    0.4222 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7121    3.2067    0.1971 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1192    4.1365    0.7938 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0053    2.2787   -0.6467 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8297    0.8581   -0.3253 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.0672    0.6130    0.9154 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2493    1.5320    2.0668 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4414    0.5556    0.6691 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4431    0.7127   -0.1628 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3864    1.1151   -1.6100 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6900    0.3961    0.5939 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.7840   -0.0232   -0.2617 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8336   -1.1032   -1.0973 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0841   -1.0908   -1.7067 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7191   -0.0547   -1.2427 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.9889    0.6092   -0.3828 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2564   -0.5689    1.6169 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8730    0.0051    1.9887 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.9744   -1.0126    2.1902 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1831   -0.8053    1.4652 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.3255   -1.8083    0.3689 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.9489   -1.9423   -0.2353 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3617   -1.4918   -0.6417 C   0  0  1  0  0  0  0  0  0  0  0  0
   -2.3188   -2.5908   -0.8912 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.8217   -3.3764    0.2590 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5939   -3.5449   -1.6849 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4426   -2.2238   -1.8077 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5874   -0.9716   -2.2083 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6796    0.0915   -1.7868 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5519    1.0571   -2.5234 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9840   -0.0854   -0.4982 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.9986   -0.0943    0.5885 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8120    4.2122    0.9466 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7770    3.6490    2.2733 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2039    5.0452    1.2538 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1208    2.6445   -0.6864 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2720    2.5015   -1.6972 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1157    0.4894   -1.1460 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5047    2.3677    2.0717 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0172    0.9861    3.0379 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2163    1.9643    2.2510 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9152    0.3660   -2.2643 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0896    2.1470   -1.7799 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4730    1.0921   -1.9579 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9537    1.3605    1.1503 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.0853   -1.8635   -1.2982 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4542   -1.8247   -2.4411 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3148    1.5300    0.1475 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8881   -0.5395    2.5546 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1817   -1.5839    1.2198 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9655    0.7474    2.7813 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0216   -0.8788    2.1758 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5103   -2.8000    0.8015 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8306   -2.6675   -0.9045 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8006   -1.3544   -1.6276 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3696   -3.2562    1.2275 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8047   -4.4975    0.0671 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9320   -3.1919    0.3955 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1948   -4.3175   -1.8368 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1216   -2.9901   -2.1301 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4072   -0.6785   -2.8834 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1546   -1.0616    1.1003 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0071    0.1427    0.1617 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8392    0.6375    1.3625 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  3  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  1
  7 21  1  0
 21 20  1  0
 20 19  1  0
 19 18  1  0
 18 12  1  0
 12 10  1  0
 10 11  1  0
 10  9  2  0
 12 13  1  0
 13 17  2  0
 17 16  1  0
 16 15  1  0
 15 14  2  0
 21 22  1  0
 22 23  1  0
 22 24  1  0
 24 25  1  0
 25 26  1  0
 25 27  1  6
 25 28  1  0
 28 29  2  0
 29 30  1  0
 30 31  2  0
 30 32  1  0
 32 33  1  1
 32  6  1  0
  9  7  1  0
 14 13  1  0
 32 24  1  0
  9 19  1  0
  1 34  1  0
  1 35  1  0
  1 36  1  0
  5 37  1  0
  5 38  1  0
  6 39  1  6
  8 40  1  0
  8 41  1  0
  8 42  1  0
 21 53  1  1
 19 52  1  1
 18 50  1  0
 18 51  1  0
 12 46  1  1
 11 43  1  0
 11 44  1  0
 11 45  1  0
 17 49  1  0
 15 48  1  0
 14 47  1  0
 22 54  1  1
 23 55  1  0
 24 56  1  6
 26 57  1  0
 26 58  1  0
 26 59  1  0
 27 60  1  0
 28 61  1  0
 29 62  1  0
 33 63  1  0
 33 64  1  0
 33 65  1  0
M  END


  Mrv1652309072218522D          

 33 37  0  0  1  0            999 V2000
    2.7166    3.3997    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3447    2.8648    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.1955    2.0534    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8236    1.5185    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4182    1.7769    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2690    0.9655    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    2.8971    0.4306    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.1303    1.2219    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7149    0.5394    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3126    1.1082    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2037    1.9259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0381    0.7155    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    5.7823    1.0717    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9315    1.8831    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7493    1.9920    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1055    1.2479    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.5079    0.6791    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8889   -0.0959    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0712   -0.2047    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    3.4735   -0.7735    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7479   -0.3808    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.9707   -0.6573    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.8215   -1.4687    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3426   -0.1224    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.5653   -0.3989    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.9725   -1.1164    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0706   -0.9246    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0628    0.1360    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0864    0.9474    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8637    1.2239    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0129    2.0353    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4918    0.6890    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.6410    1.5004    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  3  5  1  0  0  0  0
  6  5  1  1  0  0  0
  6  7  1  0  0  0  0
  7  8  1  1  0  0  0
  7  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 10 12  1  0  0  0  0
 12 13  1  6  0  0  0
 13 14  1  0  0  0  0
 14 15  2  0  0  0  0
 15 16  1  0  0  0  0
 16 17  1  0  0  0  0
 13 17  2  0  0  0  0
 12 18  1  0  0  0  0
 18 19  1  0  0  0  0
  9 19  1  0  0  0  0
 19 20  1  6  0  0  0
 21 20  1  6  0  0  0
  7 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  6  0  0  0
 24 22  1  1  0  0  0
 24 25  1  0  0  0  0
 25 26  1  1  0  0  0
 25 27  1  6  0  0  0
 25 28  1  0  0  0  0
 28 29  2  0  0  0  0
 29 30  1  0  0  0  0
 30 31  2  0  0  0  0
 30 32  1  0  0  0  0
 24 32  1  0  0  0  0
  6 32  1  0  0  0  0
 32 33  1  1  0  0  0
M  END
> <DATABASE_ID>
NP0253097

> <DATABASE_NAME>
NP-MRD

> <SMILES>
COC(=O)C[C@H]1[C@@]2(C)[C@H](O[C@H]3C[C@H](C(C)=C23)C2=COC=C2)[C@H](O)[C@H]2[C@](C)(O)C=CC(=O)[C@]12C

> <INCHI_IDENTIFIER>
InChI=1S/C26H32O7/c1-13-15(14-7-9-32-12-14)10-16-20(13)26(4)17(11-19(28)31-5)25(3)18(27)6-8-24(2,30)22(25)21(29)23(26)33-16/h6-9,12,15-17,21-23,29-30H,10-11H2,1-5H3/t15-,16+,17-,21-,22+,23-,24-,25+,26-/m1/s1

> <INCHI_KEY>
PFQPGZDVNHHXLR-XWNRUULXSA-N

> <FORMULA>
C26H32O7

> <MOLECULAR_WEIGHT>
456.535

> <EXACT_MASS>
456.21480337

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
65

> <JCHEM_AVERAGE_POLARIZABILITY>
47.32595160168012

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
methyl 2-[(1S,2R,3S,4R,8R,9S,10R,13R,15S)-13-(furan-3-yl)-2,4-dihydroxy-4,8,10,12-tetramethyl-7-oxo-16-oxatetracyclo[8.6.0.0^{3,8}.0^{11,15}]hexadeca-5,11-dien-9-yl]acetate

> <JCHEM_LOGP>
1.792058585

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
5

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.476483341357195

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.660688776411057

> <JCHEM_PKA_STRONGEST_BASIC>
-2.859220346808343

> <JCHEM_POLAR_SURFACE_AREA>
106.20000000000002

> <JCHEM_REFRACTIVITY>
120.67109999999998

> <JCHEM_ROTATABLE_BOND_COUNT>
4

> <JCHEM_RULE_OF_FIVE>
1

> <JCHEM_TRADITIONAL_IUPAC>
methyl [(1S,2R,3S,4R,8R,9S,10R,13R,15S)-13-(furan-3-yl)-2,4-dihydroxy-4,8,10,12-tetramethyl-7-oxo-16-oxatetracyclo[8.6.0.0^{3,8}.0^{11,15}]hexadeca-5,11-dien-9-yl]acetate

> <JCHEM_VEBER_RULE>
0

$$$$

HEADER    PROTEIN                                 07-SEP-22   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   07-SEP-22         0                                  
HETATM    1  C   UNK     0       5.071   6.346   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0       6.243   5.348   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0       5.965   3.833   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0       7.137   2.834   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0       4.514   3.317   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       4.236   1.802   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       5.408   0.804   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       5.843   2.281   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       6.935   1.007   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       8.050   2.069   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       7.847   3.595   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       9.405   1.336   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      10.794   2.001   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      11.072   3.515   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      12.599   3.718   0.000  0.00  0.00           C+0
HETATM   16  O   UNK     0      13.264   2.329   0.000  0.00  0.00           O+0
HETATM   17  C   UNK     0      12.148   1.268   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       9.126  -0.179   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       7.599  -0.382   0.000  0.00  0.00           C+0
HETATM   20  O   UNK     0       6.484  -1.444   0.000  0.00  0.00           O+0
HETATM   21  C   UNK     0       5.129  -0.711   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       3.679  -1.227   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0       3.400  -2.742   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0       2.506  -0.228   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       1.055  -0.745   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       1.815  -2.084   0.000  0.00  0.00           C+0
HETATM   27  O   UNK     0      -0.132  -1.726   0.000  0.00  0.00           O+0
HETATM   28  C   UNK     0      -0.117   0.254   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       0.161   1.768   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       1.612   2.285   0.000  0.00  0.00           C+0
HETATM   31  O   UNK     0       1.891   3.799   0.000  0.00  0.00           O+0
HETATM   32  C   UNK     0       2.785   1.286   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0       3.063   2.801   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    5                                                  
CONECT    4    3                                                            
CONECT    5    3    6                                                       
CONECT    6    5    7   32                                                  
CONECT    7    6    8    9   21                                             
CONECT    8    7                                                            
CONECT    9    7   10   19                                                  
CONECT   10    9   11   12                                                  
CONECT   11   10                                                            
CONECT   12   10   13   18                                                  
CONECT   13   12   14   17                                                  
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   13                                                       
CONECT   18   12   19                                                       
CONECT   19   18    9   20                                                  
CONECT   20   19   21                                                       
CONECT   21   20    7   22                                                  
CONECT   22   21   23   24                                                  
CONECT   23   22                                                            
CONECT   24   22   25   32                                                  
CONECT   25   24   26   27   28                                             
CONECT   26   25                                                            
CONECT   27   25                                                            
CONECT   28   25   29                                                       
CONECT   29   28   30                                                       
CONECT   30   29   31   32                                                  
CONECT   31   30                                                            
CONECT   32   30   24    6   33                                             
CONECT   33   32                                                            
MASTER        0    0    0    0    0    0    0    0   33    0   74    0
END

View in JSmol

Synonyms

Not Available

Chemical Formula

C₂₆H₃₂O₇

Average Mass

456.5350 Da

Monoisotopic Mass

456.21480 Da

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

COC(=O)C[C@H]1[C@@]2(C)[C@H](O[C@H]3C[C@H](C(C)=C23)C2=COC=C2)[C@H](O)[C@H]2[C@](C)(O)C=CC(=O)[C@]12C

InChI Identifier

InChI=1S/C26H32O7/c1-13-15(14-7-9-32-12-14)10-16-20(13)26(4)17(11-19(28)31-5)25(3)18(27)6-8-24(2,30)22(25)21(29)23(26)33-16/h6-9,12,15-17,21-23,29-30H,10-11H2,1-5H3/t15-,16+,17-,21-,22+,23-,24-,25+,26-/m1/s1

InChI Key

PFQPGZDVNHHXLR-XWNRUULXSA-N

Experimental Spectra

Not Available

Predicted Spectra

Spectrum Type	Description	Depositor ID	Depositor Organization	Depositor	Deposition Date	View
1D NMR	¹³C NMR Spectrum (1D, 25 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 252 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 50 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 75 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 101 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 126 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 151 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 176 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 201 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹³C NMR Spectrum (1D, 226 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum
1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	Wishart Lab	Wishart Lab	David Wishart	2021-06-20	View Spectrum

Chemical Shift Submissions

Not Available

Species

Species of Origin

Species Name	Source	Reference
Azadirachta indica	LOTUS Database	35616633

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as naphthofurans. Naphthofurans are compounds containing a furan ring fused to a naphthalene moiety. Furan is a 5 membered- ring aromatic ring with four carbon and one oxygen atoms. Naphthalene is a polycyclic aromatic hydrocarbon made up of two fused benzene rings.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Naphthofurans

Sub Class

Not Available

Direct Parent

Naphthofurans

Alternative Parents

Substituents

Naphthofuran
Cyclohexenone
Heteroaromatic compound
Methyl ester
Tetrahydrofuran
Tertiary alcohol
Furan
Cyclic alcohol
Secondary alcohol
Ketone
Carboxylic acid ester
Oxacycle
Monocarboxylic acid or derivatives
Ether
Dialkyl ether
Carboxylic acid derivative
Organic oxygen compound
Organic oxide
Hydrocarbon derivative
Organooxygen compound
Carbonyl group
Alcohol
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Physical Properties

State

Not Available

Experimental Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Predicted Properties

Property	Value	Source

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FoodDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

101634707

PDB ID

Not Available

ChEBI ID

Not Available

Good Scents ID

Not Available

References

General References

Ogidigo JO, Iwuchukwu EA, Ibeji CU, Okpalefe O, Soliman MES: Natural phyto, compounds as possible noncovalent inhibitors against SARS-CoV2 protease: computational approach. J Biomol Struct Dyn. 2022 Mar;40(5):2284-2301. doi: 10.1080/07391102.2020.1837681. Epub 2020 Oct 25. [PubMed:33103616 ]
Wu Q, Kohli M, Bergen HR 3rd, Cheville JC, Karnes RJ, Cao H, Young CY, Tindall DJ, McNiven MA, Donkena KV: Preclinical evaluation of the supercritical extract of azadirachta indica (neem) leaves in vitro and in vivo on inhibition of prostate cancer tumor growth. Mol Cancer Ther. 2014 May;13(5):1067-77. doi: 10.1158/1535-7163.MCT-13-0699. Epub 2014 Mar 27. [PubMed:24674886 ]
LOTUS database [Link]

Showing NP-Card for methyl 2-[(1s,2r,3s,4r,8r,9s,10r,13r,15s)-13-(furan-3-yl)-2,4-dihydroxy-4,8,10,12-tetramethyl-7-oxo-16-oxatetracyclo[8.6.0.0³,⁸.0¹¹,¹⁵]hexadeca-5,11-dien-9-yl]acetate (NP0253097)

MOL for NP0253097 (methyl 2-[(1s,2r,3s,4r,8r,9s,10r,13r,15s)-13-(furan-3-yl)-2,4-dihydroxy-4,8,10,12-tetramethyl-7-oxo-16-oxatetracyclo[8.6.0.0³,⁸.0¹¹,¹⁵]hexadeca-5,11-dien-9-yl]acetate)

3D MOL for NP0253097 (methyl 2-[(1s,2r,3s,4r,8r,9s,10r,13r,15s)-13-(furan-3-yl)-2,4-dihydroxy-4,8,10,12-tetramethyl-7-oxo-16-oxatetracyclo[8.6.0.0³,⁸.0¹¹,¹⁵]hexadeca-5,11-dien-9-yl]acetate)

3D SDF for NP0253097 (methyl 2-[(1s,2r,3s,4r,8r,9s,10r,13r,15s)-13-(furan-3-yl)-2,4-dihydroxy-4,8,10,12-tetramethyl-7-oxo-16-oxatetracyclo[8.6.0.0³,⁸.0¹¹,¹⁵]hexadeca-5,11-dien-9-yl]acetate)

3D-SDF for NP0253097 (methyl 2-[(1s,2r,3s,4r,8r,9s,10r,13r,15s)-13-(furan-3-yl)-2,4-dihydroxy-4,8,10,12-tetramethyl-7-oxo-16-oxatetracyclo[8.6.0.0³,⁸.0¹¹,¹⁵]hexadeca-5,11-dien-9-yl]acetate)

PDB for NP0253097 (methyl 2-[(1s,2r,3s,4r,8r,9s,10r,13r,15s)-13-(furan-3-yl)-2,4-dihydroxy-4,8,10,12-tetramethyl-7-oxo-16-oxatetracyclo[8.6.0.0³,⁸.0¹¹,¹⁵]hexadeca-5,11-dien-9-yl]acetate)

3D PDB for NP0253097 (methyl 2-[(1s,2r,3s,4r,8r,9s,10r,13r,15s)-13-(furan-3-yl)-2,4-dihydroxy-4,8,10,12-tetramethyl-7-oxo-16-oxatetracyclo[8.6.0.0³,⁸.0¹¹,¹⁵]hexadeca-5,11-dien-9-yl]acetate)

SMILES for NP0253097 (methyl 2-[(1s,2r,3s,4r,8r,9s,10r,13r,15s)-13-(furan-3-yl)-2,4-dihydroxy-4,8,10,12-tetramethyl-7-oxo-16-oxatetracyclo[8.6.0.0³,⁸.0¹¹,¹⁵]hexadeca-5,11-dien-9-yl]acetate)

INCHI for NP0253097 (methyl 2-[(1s,2r,3s,4r,8r,9s,10r,13r,15s)-13-(furan-3-yl)-2,4-dihydroxy-4,8,10,12-tetramethyl-7-oxo-16-oxatetracyclo[8.6.0.0³,⁸.0¹¹,¹⁵]hexadeca-5,11-dien-9-yl]acetate)

Structure for NP0253097 (methyl 2-[(1s,2r,3s,4r,8r,9s,10r,13r,15s)-13-(furan-3-yl)-2,4-dihydroxy-4,8,10,12-tetramethyl-7-oxo-16-oxatetracyclo[8.6.0.0³,⁸.0¹¹,¹⁵]hexadeca-5,11-dien-9-yl]acetate)

3D Structure for NP0253097 (methyl 2-[(1s,2r,3s,4r,8r,9s,10r,13r,15s)-13-(furan-3-yl)-2,4-dihydroxy-4,8,10,12-tetramethyl-7-oxo-16-oxatetracyclo[8.6.0.0³,⁸.0¹¹,¹⁵]hexadeca-5,11-dien-9-yl]acetate)